RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 CSAG1Q6PB30 78 aa5.85□□□□□ -1.47
LRRC28-214ENST00000559433 LCA10Q71F78 164 aa5.83□□□□□ -1.48
LRRC28-214ENST00000559433 CYP4F30PQ9H0H9 118 aa5.83□□□□□ -1.48
LRRC28-214ENST00000559433 LOC101927531A0A1B0GV80 90 aa5.81□□□□□ -1.48
LRRC28-214ENST00000559433 KRTAP19-6Q3LI70 58 aa5.8□□□□□ -1.48
LRRC28-214ENST00000559433 KRTAP15-1Q3LI76 137 aa5.8□□□□□ -1.48
LRRC28-214ENST00000559433 MACF1Q9UPN3 7388 aaKnown RBP5.78□□□□□ -1.48
LRRC28-214ENST00000559433 UQCRQO14949 82 aa5.78□□□□□ -1.48
LRRC28-214ENST00000559433 LINC00643Q86TS7 51 aa5.78□□□□□ -1.48
LRRC28-214ENST00000559433 A0A1B0GV90 55 aa5.77□□□□□ -1.49
LRRC28-214ENST00000559433 A0A087WVE0 104 aa5.76□□□□□ -1.49
LRRC28-214ENST00000559433 H0Y9P7 68 aa5.76□□□□□ -1.49
LRRC28-214ENST00000559433 ATOX1O00244 68 aa5.76□□□□□ -1.49
LRRC28-214ENST00000559433 KRTAP9-4Q9BYQ2 154 aa5.74□□□□□ -1.49
LRRC28-214ENST00000559433 KRTAP9-9Q9BYP9 154 aa5.72□□□□□ -1.49
LRRC28-214ENST00000559433 SYNE2Q8WXH0 6885 aaKnown RBP5.71□□□□□ -1.49
LRRC28-214ENST00000559433 Q5VV11 94 aa5.68□□□□□ -1.5
LRRC28-214ENST00000559433 KLKP1Q107X0 134 aa5.67□□□□□ -1.5
LRRC28-214ENST00000559433 NDUFC1O43677 76 aa5.66□□□□□ -1.5
LRRC28-214ENST00000559433 LINC00208Q96KT6 92 aa5.66□□□□□ -1.5
LRRC28-214ENST00000559433 SPRR2GQ9BYE4 73 aa5.66□□□□□ -1.5
LRRC28-214ENST00000559433 J3QR89 54 aa5.65□□□□□ -1.5
LRRC28-214ENST00000559433 OCR1Q9BZK8 76 aa5.65□□□□□ -1.5
LRRC28-214ENST00000559433 MP68P56378 58 aa5.64□□□□□ -1.51
LRRC28-214ENST00000559433 IMUPQ9GZP8 106 aa5.64□□□□□ -1.51
LRRC28-214ENST00000559433 A8MUN3 132 aa5.63□□□□□ -1.51
LRRC28-214ENST00000559433 MT1BP07438 61 aa5.63□□□□□ -1.51
LRRC28-214ENST00000559433 A6NN06 94 aa5.62□□□□□ -1.51
LRRC28-214ENST00000559433 KRTAP19-8Q3LI54 63 aa5.62□□□□□ -1.51
LRRC28-214ENST00000559433 CRIPTQ9P021 101 aa5.62□□□□□ -1.51
LRRC28-214ENST00000559433 H0YAA0 97 aa5.56□□□□□ -1.52
LRRC28-214ENST00000559433 SCGB1A1P11684 91 aa5.56□□□□□ -1.52
LRRC28-214ENST00000559433 H3BPC8 53 aa5.55□□□□□ -1.52
LRRC28-214ENST00000559433 KRTAP6-3Q3LI67 103 aa5.55□□□□□ -1.52
LRRC28-214ENST00000559433 ADM2Q7Z4H4 148 aa5.53□□□□□ -1.52
LRRC28-214ENST00000559433 LCE1DQ5T752 114 aa5.52□□□□□ -1.53
LRRC28-214ENST00000559433 LCE5AQ5TCM9 118 aa5.52□□□□□ -1.53
LRRC28-214ENST00000559433 KRTAP10-5P60370 271 aa5.5□□□□□ -1.53
LRRC28-214ENST00000559433 KRTAP4-8A0A0G2JLE6 195 aa5.49□□□□□ -1.53
LRRC28-214ENST00000559433 DMAC1Q96GE9 116 aa5.48□□□□□ -1.53
LRRC28-214ENST00000559433 MT-ATP8P03928 68 aa5.45□□□□□ -1.54
LRRC28-214ENST00000559433 K7ERU9 68 aa5.44□□□□□ -1.54
LRRC28-214ENST00000559433 C20orf197Q8N268 126 aa5.44□□□□□ -1.54
LRRC28-214ENST00000559433 PLAC4Q8WY50 150 aa5.41□□□□□ -1.54
LRRC28-214ENST00000559433 R4GN34 69 aa5.41□□□□□ -1.54
LRRC28-214ENST00000559433 TRAV7A0A075B6U4 112 aa5.4□□□□□ -1.54
LRRC28-214ENST00000559433 SMIM20Q8N5G0 67 aa5.4□□□□□ -1.54
LRRC28-214ENST00000559433 P0C880 135 aa5.39□□□□□ -1.55
LRRC28-214ENST00000559433 PRO2289Q9P1D8 64 aa5.38□□□□□ -1.55
LRRC28-214ENST00000559433 NEBP20929 6669 aa5.37□□□□□ -1.55
LRRC28-214ENST00000559433 M0QZ58 72 aa5.35□□□□□ -1.55
LRRC28-214ENST00000559433 ACYP2P14621 99 aa5.35□□□□□ -1.55
LRRC28-214ENST00000559433 SPTSSBQ8NFR3 76 aa5.33□□□□□ -1.56
LRRC28-214ENST00000559433 LINC01554Q52M75 96 aa5.3□□□□□ -1.56
LRRC28-214ENST00000559433 SNURFQ9Y675 71 aa5.3□□□□□ -1.56
LRRC28-214ENST00000559433 MUC12Q9UKN1 5478 aa5.3□□□□□ -1.56
LRRC28-214ENST00000559433 MT1XP80297 61 aa5.29□□□□□ -1.56
LRRC28-214ENST00000559433 CHKB-CPT1BH3BT56 60 aa5.28□□□□□ -1.56
LRRC28-214ENST00000559433 KRTAP4-9Q9BYQ8 210 aa5.28□□□□□ -1.56
LRRC28-214ENST00000559433 KRTAP5-9P26371 169 aa5.26□□□□□ -1.57
LRRC28-214ENST00000559433 KRTAP4-7Q9BYR0 210 aa5.26□□□□□ -1.57
LRRC28-214ENST00000559433 KMT2DO14686 5537 aa5.22□□□□□ -1.57
LRRC28-214ENST00000559433 SERP2Q8N6R1 65 aa5.22□□□□□ -1.57
LRRC28-214ENST00000559433 MDN1Q9NU22 5596 aa5.22□□□□□ -1.57
LRRC28-214ENST00000559433 SPANXA2-OT1Q8N9U9 137 aa5.21□□□□□ -1.58
LRRC28-214ENST00000559433 KRTAP4-11Q9BYQ6 195 aa5.19□□□□□ -1.58
LRRC28-214ENST00000559433 KRTAP20-1Q3LI63 56 aa5.18□□□□□ -1.58
LRRC28-214ENST00000559433 KRTAP8-1Q8IUC2 63 aa5.16□□□□□ -1.58
LRRC28-214ENST00000559433 SPRR2FQ96RM1 72 aa5.16□□□□□ -1.58
LRRC28-214ENST00000559433 KRTAP12-2P59991 146 aa5.15□□□□□ -1.59
LRRC28-214ENST00000559433 SPRR2EP22531 72 aa5.1□□□□□ -1.59
LRRC28-214ENST00000559433 SPRR2BP35325 72 aa5.1□□□□□ -1.59
LRRC28-214ENST00000559433 SPRR2AP35326 72 aa5.1□□□□□ -1.59
LRRC28-214ENST00000559433 COA5Q86WW8 74 aa5.08□□□□□ -1.6
LRRC28-214ENST00000559433 COX7CP15954 63 aa5.06□□□□□ -1.6
LRRC28-214ENST00000559433 KRTAP2-3P0C7H8 128 aa5.05□□□□□ -1.6
LRRC28-214ENST00000559433 KRTAP10-7P60409 375 aaPredicted RBP5.05□□□□□ -1.6
LRRC28-214ENST00000559433 KRTAP2-4Q9BYR9 128 aa5.05□□□□□ -1.6
LRRC28-214ENST00000559433 KRTAP13-4Q3LI77 160 aa5.04□□□□□ -1.6
LRRC28-214ENST00000559433 SEC61GP60059 68 aa5.03□□□□□ -1.6
LRRC28-214ENST00000559433 KRTAP10-12P60413 245 aa5.02□□□□□ -1.61
LRRC28-214ENST00000559433 KRTAP4-2Q9BYR5 136 aa5.02□□□□□ -1.61
LRRC28-214ENST00000559433 PRAC1Q96KF2 57 aa5.01□□□□□ -1.61
LRRC28-214ENST00000559433 SERP1Q9Y6X1 66 aa5.01□□□□□ -1.61
LRRC28-214ENST00000559433 CAMK2N1Q7Z7J9 78 aa5□□□□□ -1.61
LRRC28-214ENST00000559433 CYSTM1Q9H1C7 97 aa4.98□□□□□ -1.61
LRRC28-214ENST00000559433 H7BZZ5 65 aa4.97□□□□□ -1.61
LRRC28-214ENST00000559433 LCE1AQ5T7P2 110 aa4.97□□□□□ -1.61
LRRC28-214ENST00000559433 SPRR2DP22532 72 aa4.93□□□□□ -1.62
LRRC28-214ENST00000559433 A0A0D9SG42 100 aa4.92□□□□□ -1.62
LRRC28-214ENST00000559433 ANAPC13Q9BS18 74 aa4.91□□□□□ -1.62
LRRC28-214ENST00000559433 SPATA8Q6RVD6 105 aa4.9□□□□□ -1.63
LRRC28-214ENST00000559433 A0A1B0GU33 70 aa4.89□□□□□ -1.63
LRRC28-214ENST00000559433 KRTAP2-2Q9BYT5 123 aa4.89□□□□□ -1.63
LRRC28-214ENST00000559433 KRTAP2-1Q9BYU5 128 aa4.89□□□□□ -1.63
LRRC28-214ENST00000559433 SPINT4Q6UDR6 99 aa4.86□□□□□ -1.63
LRRC28-214ENST00000559433 A0A1B0GU69 56 aa4.83□□□□□ -1.64
LRRC28-214ENST00000559433 CCDC179H3BU77 68 aa4.8□□□□□ -1.64
LRRC28-214ENST00000559433 KRTAP12-1P59990 96 aa4.79□□□□□ -1.64
LRRC28-214ENST00000559433 SMIM26A0A096LP01 95 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms