RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 HERC1Q15751 4861 aa5.09□□□□□ -1.59
HNRNPC-220ENST00000555585 CYSTM1Q9H1C7 97 aa5.09□□□□□ -1.59
HNRNPC-220ENST00000555585 NDUFC1O43677 76 aa5.08□□□□□ -1.6
HNRNPC-220ENST00000555585 SPINK7P58062 85 aa5.07□□□□□ -1.6
HNRNPC-220ENST00000555585 SVIPQ8NHG7 77 aa5.07□□□□□ -1.6
HNRNPC-220ENST00000555585 HMCN2Q8NDA2 5059 aa5.05□□□□□ -1.6
HNRNPC-220ENST00000555585 H7BZZ5 65 aa5.05□□□□□ -1.6
HNRNPC-220ENST00000555585 LRP2P98164 4655 aa5.04□□□□□ -1.6
HNRNPC-220ENST00000555585 HRES1P13985 223 aa5.03□□□□□ -1.6
HNRNPC-220ENST00000555585 MUC17Q685J3 4493 aa5.01□□□□□ -1.61
HNRNPC-220ENST00000555585 TMEM258P61165 79 aa4.99□□□□□ -1.61
HNRNPC-220ENST00000555585 C4orf26Q17RF5 130 aa4.99□□□□□ -1.61
HNRNPC-220ENST00000555585 SPANXA2-OT1Q8N9U9 137 aa4.99□□□□□ -1.61
HNRNPC-220ENST00000555585 FAM236DA0A1B0GTK5 79 aa4.98□□□□□ -1.61
HNRNPC-220ENST00000555585 FAM236CP0DP71 79 aa4.98□□□□□ -1.61
HNRNPC-220ENST00000555585 KRTAP4-1Q9BYQ7 146 aa4.96□□□□□ -1.62
HNRNPC-220ENST00000555585 ATP5EP56381 51 aaPredicted RBP4.95□□□□□ -1.62
HNRNPC-220ENST00000555585 RBM12B-AS1Q9P1G2 102 aa4.94□□□□□ -1.62
HNRNPC-220ENST00000555585 COX6B2Q6YFQ2 88 aa4.93□□□□□ -1.62
HNRNPC-220ENST00000555585 DMAC1Q96GE9 116 aa4.91□□□□□ -1.62
HNRNPC-220ENST00000555585 ACYP2P14621 99 aa4.9□□□□□ -1.63
HNRNPC-220ENST00000555585 KRTAP9-8Q9BYQ0 159 aa4.9□□□□□ -1.63
HNRNPC-220ENST00000555585 A8MUN3 132 aa4.89□□□□□ -1.63
HNRNPC-220ENST00000555585 MPLKIPQ8TAP9 179 aa4.89□□□□□ -1.63
HNRNPC-220ENST00000555585 COA5Q86WW8 74 aa4.86□□□□□ -1.63
HNRNPC-220ENST00000555585 CHKB-CPT1BH3BT56 60 aa4.85□□□□□ -1.63
HNRNPC-220ENST00000555585 SERP1Q9Y6X1 66 aa4.85□□□□□ -1.63
HNRNPC-220ENST00000555585 H1FX-AS1Q4G0G2 97 aa4.84□□□□□ -1.63
HNRNPC-220ENST00000555585 S4R3F8 94 aa4.81□□□□□ -1.64
HNRNPC-220ENST00000555585 RNF213Q63HN8 5207 aa4.81□□□□□ -1.64
HNRNPC-220ENST00000555585 KRTAP19-2Q3LHN2 52 aa4.78□□□□□ -1.64
HNRNPC-220ENST00000555585 UBR4Q5T4S7 5183 aa4.78□□□□□ -1.64
HNRNPC-220ENST00000555585 RPS28P62857 69 aaKnown RBP4.77□□□□□ -1.65
HNRNPC-220ENST00000555585 LCA10Q71F78 164 aa4.77□□□□□ -1.65
HNRNPC-220ENST00000555585 SPTSSBQ8NFR3 76 aa4.76□□□□□ -1.65
HNRNPC-220ENST00000555585 KRTAP23-1A1A580 65 aa4.73□□□□□ -1.65
HNRNPC-220ENST00000555585 MUC2Q02817 5179 aa4.73□□□□□ -1.65
HNRNPC-220ENST00000555585 KRTAP15-1Q3LI76 137 aa4.72□□□□□ -1.65
HNRNPC-220ENST00000555585 SMIM26A0A096LP01 95 aa4.71□□□□□ -1.66
HNRNPC-220ENST00000555585 CSAG1Q6PB30 78 aa4.7□□□□□ -1.66
HNRNPC-220ENST00000555585 FLGP20930 4061 aaPredicted RBP4.67□□□□□ -1.66
HNRNPC-220ENST00000555585 M0R2T5 61 aa4.65□□□□□ -1.67
HNRNPC-220ENST00000555585 MT1HP80294 61 aa4.65□□□□□ -1.67
HNRNPC-220ENST00000555585 V9GYY9 64 aa4.64□□□□□ -1.67
HNRNPC-220ENST00000555585 LINC01558Q9Y6Z2 57 aa4.63□□□□□ -1.67
HNRNPC-220ENST00000555585 SEC61GP60059 68 aa4.62□□□□□ -1.67
HNRNPC-220ENST00000555585 Q1T7F1 81 aa4.62□□□□□ -1.67
HNRNPC-220ENST00000555585 FAT4Q6V0I7 4981 aa4.62□□□□□ -1.67
HNRNPC-220ENST00000555585 A0A1B0GU69 56 aa4.61□□□□□ -1.67
HNRNPC-220ENST00000555585 PRR15LQ9BU68 103 aa4.6□□□□□ -1.67
HNRNPC-220ENST00000555585 PSPHP1O15172 72 aa4.57□□□□□ -1.68
HNRNPC-220ENST00000555585 ADM2Q7Z4H4 148 aa4.57□□□□□ -1.68
HNRNPC-220ENST00000555585 H0YAA0 97 aa4.55□□□□□ -1.68
HNRNPC-220ENST00000555585 P0C880 135 aa4.52□□□□□ -1.69
HNRNPC-220ENST00000555585 KRTAP10-6P60371 365 aaPredicted RBP4.51□□□□□ -1.69
HNRNPC-220ENST00000555585 Q5VV11 94 aa4.51□□□□□ -1.69
HNRNPC-220ENST00000555585 A0A1B0GU33 70 aa4.48□□□□□ -1.69
HNRNPC-220ENST00000555585 MT2AP02795 61 aa4.45□□□□□ -1.7
HNRNPC-220ENST00000555585 A6NED7 52 aa4.44□□□□□ -1.7
HNRNPC-220ENST00000555585 UQCR11O14957 56 aa4.44□□□□□ -1.7
HNRNPC-220ENST00000555585 KRTAP10-10P60014 251 aa4.44□□□□□ -1.7
HNRNPC-220ENST00000555585 R4GN34 69 aa4.42□□□□□ -1.7
HNRNPC-220ENST00000555585 M0QZ58 72 aa4.41□□□□□ -1.7
HNRNPC-220ENST00000555585 MT1FP04733 61 aa4.41□□□□□ -1.7
HNRNPC-220ENST00000555585 SPATA8Q6RVD6 105 aa4.41□□□□□ -1.7
HNRNPC-220ENST00000555585 CRIPTQ9P021 101 aa4.4□□□□□ -1.71
HNRNPC-220ENST00000555585 MIR22HGQ0VDD5 57 aa4.39□□□□□ -1.71
HNRNPC-220ENST00000555585 KRTAP13-4Q3LI77 160 aa4.39□□□□□ -1.71
HNRNPC-220ENST00000555585 A0A0D9SG42 100 aa4.35□□□□□ -1.71
HNRNPC-220ENST00000555585 LINC01554Q52M75 96 aa4.35□□□□□ -1.71
HNRNPC-220ENST00000555585 A8MU10 97 aa4.34□□□□□ -1.71
HNRNPC-220ENST00000555585 BRK1Q8WUW1 75 aa4.33□□□□□ -1.72
HNRNPC-220ENST00000555585 CDC42SE1Q9NRR8 79 aa4.33□□□□□ -1.72
HNRNPC-220ENST00000555585 SPRR2GQ9BYE4 73 aa4.3□□□□□ -1.72
HNRNPC-220ENST00000555585 SPINT4Q6UDR6 99 aa4.26□□□□□ -1.73
HNRNPC-220ENST00000555585 A0A0A0MQY5 61 aa4.23□□□□□ -1.73
HNRNPC-220ENST00000555585 K7ERS5 55 aa4.23□□□□□ -1.73
HNRNPC-220ENST00000555585 A6NN06 94 aa4.22□□□□□ -1.73
HNRNPC-220ENST00000555585 KRTAP12-1P59990 96 aa4.22□□□□□ -1.73
HNRNPC-220ENST00000555585 KRTAP12-2P59991 146 aa4.21□□□□□ -1.74
HNRNPC-220ENST00000555585 KRTAP19-8Q3LI54 63 aa4.21□□□□□ -1.74
HNRNPC-220ENST00000555585 PLAC4Q8WY50 150 aa4.2□□□□□ -1.74
HNRNPC-220ENST00000555585 MT1BP07438 61 aa4.16□□□□□ -1.74
HNRNPC-220ENST00000555585 PRO0628Q9UI54 55 aa4.16□□□□□ -1.74
HNRNPC-220ENST00000555585 CAMK2N1Q7Z7J9 78 aa4.15□□□□□ -1.75
HNRNPC-220ENST00000555585 LCE1AQ5T7P2 110 aa4.13□□□□□ -1.75
HNRNPC-220ENST00000555585 PMAIP1Q13794 54 aa4.09□□□□□ -1.75
HNRNPC-220ENST00000555585 USH2AO75445 5202 aa4.06□□□□□ -1.76
HNRNPC-220ENST00000555585 ROMO1P60602 79 aa4.02□□□□□ -1.77
HNRNPC-220ENST00000555585 PRO2289Q9P1D8 64 aa4.01□□□□□ -1.77
HNRNPC-220ENST00000555585 KRTAP10-5P60370 271 aa4□□□□□ -1.77
HNRNPC-220ENST00000555585 MT1XP80297 61 aa4□□□□□ -1.77
HNRNPC-220ENST00000555585 C10orf95Q9H7T3 257 aa4□□□□□ -1.77
HNRNPC-220ENST00000555585 KRTAP19-6Q3LI70 58 aa3.96□□□□□ -1.78
HNRNPC-220ENST00000555585 SSPOA2VEC9 5147 aa3.95□□□□□ -1.78
HNRNPC-220ENST00000555585 KRTAP10-7P60409 375 aaPredicted RBP3.94□□□□□ -1.78
HNRNPC-220ENST00000555585 TNP1P09430 55 aa3.92□□□□□ -1.78
HNRNPC-220ENST00000555585 FSIP2Q5CZC0 6907 aa3.9□□□□□ -1.79
HNRNPC-220ENST00000555585 KRTAP25-1Q3LHN0 102 aa3.89□□□□□ -1.79
HNRNPC-220ENST00000555585 KRTAP2-2Q9BYT5 123 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms