RNA–Protein interactions for RNA: ENST00000555254.5

PSEN1-212, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 754 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-212ENST00000555254 SERP1Q9Y6X1 66 aa8.97□□□□□ -0.97
PSEN1-212ENST00000555254 CHKB-CPT1BH3BT56 60 aa8.92□□□□□ -0.98
PSEN1-212ENST00000555254 MPLKIPQ8TAP9 179 aa8.92□□□□□ -0.98
PSEN1-212ENST00000555254 KRTAP19-2Q3LHN2 52 aa8.91□□□□□ -0.98
PSEN1-212ENST00000555254 LCE2CQ5TA81 110 aa8.91□□□□□ -0.98
PSEN1-212ENST00000555254 COA5Q86WW8 74 aa8.91□□□□□ -0.98
PSEN1-212ENST00000555254 KRTAP3-1Q9BYR8 98 aa8.9□□□□□ -0.98
PSEN1-212ENST00000555254 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.88□□□□□ -0.99
PSEN1-212ENST00000555254 RPS28P62857 69 aaKnown RBP8.88□□□□□ -0.99
PSEN1-212ENST00000555254 H1FX-AS1Q4G0G2 97 aa8.88□□□□□ -0.99
PSEN1-212ENST00000555254 SPTSSBQ8NFR3 76 aa8.82□□□□□ -1
PSEN1-212ENST00000555254 MT1HP80294 61 aa8.8□□□□□ -1
PSEN1-212ENST00000555254 S4R3F8 94 aa8.78□□□□□ -1
PSEN1-212ENST00000555254 M0R2T5 61 aa8.75□□□□□ -1.01
PSEN1-212ENST00000555254 SMIM26A0A096LP01 95 aa8.73□□□□□ -1.01
PSEN1-212ENST00000555254 LCA10Q71F78 164 aa8.68□□□□□ -1.02
PSEN1-212ENST00000555254 CSAG1Q6PB30 78 aa8.64□□□□□ -1.03
PSEN1-212ENST00000555254 V9GYY9 64 aa8.62□□□□□ -1.03
PSEN1-212ENST00000555254 FLGP20930 4061 aaPredicted RBP8.61□□□□□ -1.03
PSEN1-212ENST00000555254 KRTAP10-6P60371 365 aaPredicted RBP8.6□□□□□ -1.03
PSEN1-212ENST00000555254 KRTAP3-3Q9BYR6 98 aa8.59□□□□□ -1.03
PSEN1-212ENST00000555254 LORP23490 312 aaPredicted RBP8.56□□□□□ -1.04
PSEN1-212ENST00000555254 SEC61GP60059 68 aa8.55□□□□□ -1.04
PSEN1-212ENST00000555254 Q1T7F1 81 aa8.54□□□□□ -1.04
PSEN1-212ENST00000555254 LINC01558Q9Y6Z2 57 aa8.53□□□□□ -1.04
PSEN1-212ENST00000555254 PRR15LQ9BU68 103 aa8.51□□□□□ -1.05
PSEN1-212ENST00000555254 A0A1B0GU69 56 aa8.48□□□□□ -1.05
PSEN1-212ENST00000555254 SYNE2Q8WXH0 6885 aaKnown RBP8.42□□□□□ -1.06
PSEN1-212ENST00000555254 PSPHP1O15172 72 aa8.4□□□□□ -1.06
PSEN1-212ENST00000555254 SSPOA2VEC9 5147 aa8.37□□□□□ -1.07
PSEN1-212ENST00000555254 H0YAA0 97 aa8.37□□□□□ -1.07
PSEN1-212ENST00000555254 ADM2Q7Z4H4 148 aa8.37□□□□□ -1.07
PSEN1-212ENST00000555254 FCGBPQ9Y6R7 5405 aaPredicted RBP8.35□□□□□ -1.07
PSEN1-212ENST00000555254 KRTAP9-8Q9BYQ0 159 aa8.35□□□□□ -1.07
PSEN1-212ENST00000555254 USH2AO75445 5202 aa8.31□□□□□ -1.08
PSEN1-212ENST00000555254 MACF1Q9UPN3 7388 aaKnown RBP8.3□□□□□ -1.08
PSEN1-212ENST00000555254 Q5VV11 94 aa8.28□□□□□ -1.08
PSEN1-212ENST00000555254 MT2AP02795 61 aa8.27□□□□□ -1.09
PSEN1-212ENST00000555254 KRTAP3-2Q9BYR7 98 aa8.27□□□□□ -1.09
PSEN1-212ENST00000555254 A0A1B0GU33 70 aa8.26□□□□□ -1.09
PSEN1-212ENST00000555254 KRTAP10-10P60014 251 aa8.24□□□□□ -1.09
PSEN1-212ENST00000555254 P0C880 135 aa8.23□□□□□ -1.09
PSEN1-212ENST00000555254 MT1FP04733 61 aa8.21□□□□□ -1.1
PSEN1-212ENST00000555254 A6NED7 52 aa8.2□□□□□ -1.1
PSEN1-212ENST00000555254 UQCR11O14957 56 aa8.2□□□□□ -1.1
PSEN1-212ENST00000555254 M0QZ58 72 aa8.12□□□□□ -1.11
PSEN1-212ENST00000555254 CRIPTQ9P021 101 aa8.11□□□□□ -1.11
PSEN1-212ENST00000555254 R4GN34 69 aa8.1□□□□□ -1.11
PSEN1-212ENST00000555254 MIR22HGQ0VDD5 57 aa8.09□□□□□ -1.11
PSEN1-212ENST00000555254 KRTAP9-3Q9BYQ3 159 aa8.09□□□□□ -1.11
PSEN1-212ENST00000555254 KRTAP19-1Q8IUB9 90 aa8.07□□□□□ -1.12
PSEN1-212ENST00000555254 SPATA8Q6RVD6 105 aa8.05□□□□□ -1.12
PSEN1-212ENST00000555254 LCE2BO14633 110 aa8.01□□□□□ -1.13
PSEN1-212ENST00000555254 BRK1Q8WUW1 75 aa7.99□□□□□ -1.13
PSEN1-212ENST00000555254 CDC42SE1Q9NRR8 79 aa7.99□□□□□ -1.13
PSEN1-212ENST00000555254 KRTAP13-4Q3LI77 160 aa7.98□□□□□ -1.13
PSEN1-212ENST00000555254 NEBP20929 6669 aa7.97□□□□□ -1.13
PSEN1-212ENST00000555254 A0A0D9SG42 100 aa7.95□□□□□ -1.14
PSEN1-212ENST00000555254 LINC01554Q52M75 96 aa7.94□□□□□ -1.14
PSEN1-212ENST00000555254 KRTAP6-3Q3LI67 103 aa7.92□□□□□ -1.14
PSEN1-212ENST00000555254 A8MU10 97 aa7.9□□□□□ -1.14
PSEN1-212ENST00000555254 K7ERS5 55 aa7.86□□□□□ -1.15
PSEN1-212ENST00000555254 SPRR2GQ9BYE4 73 aa7.86□□□□□ -1.15
PSEN1-212ENST00000555254 KRTAP20-1Q3LI63 56 aa7.82□□□□□ -1.16
PSEN1-212ENST00000555254 SPINT4Q6UDR6 99 aa7.79□□□□□ -1.16
PSEN1-212ENST00000555254 A6NN06 94 aa7.77□□□□□ -1.17
PSEN1-212ENST00000555254 PRO0628Q9UI54 55 aa7.75□□□□□ -1.17
PSEN1-212ENST00000555254 KRTAP12-1P59990 96 aa7.72□□□□□ -1.17
PSEN1-212ENST00000555254 PLAC4Q8WY50 150 aa7.72□□□□□ -1.17
PSEN1-212ENST00000555254 KRTAP12-2P59991 146 aa7.68□□□□□ -1.18
PSEN1-212ENST00000555254 KRTAP19-8Q3LI54 63 aa7.68□□□□□ -1.18
PSEN1-212ENST00000555254 KRTAP19-6Q3LI70 58 aa7.66□□□□□ -1.18
PSEN1-212ENST00000555254 MUC12Q9UKN1 5478 aa7.66□□□□□ -1.18
PSEN1-212ENST00000555254 CAMK2N1Q7Z7J9 78 aa7.61□□□□□ -1.19
PSEN1-212ENST00000555254 MT1BP07438 61 aa7.57□□□□□ -1.2
PSEN1-212ENST00000555254 PMAIP1Q13794 54 aa7.57□□□□□ -1.2
PSEN1-212ENST00000555254 ROMO1P60602 79 aa7.41□□□□□ -1.22
PSEN1-212ENST00000555254 PRO2289Q9P1D8 64 aa7.37□□□□□ -1.23
PSEN1-212ENST00000555254 KRTAP10-5P60370 271 aa7.36□□□□□ -1.23
PSEN1-212ENST00000555254 KMT2DO14686 5537 aa7.36□□□□□ -1.23
PSEN1-212ENST00000555254 KRTAP2-3P0C7H8 128 aa7.33□□□□□ -1.24
PSEN1-212ENST00000555254 KRTAP2-4Q9BYR9 128 aa7.33□□□□□ -1.24
PSEN1-212ENST00000555254 C10orf95Q9H7T3 257 aa7.31□□□□□ -1.24
PSEN1-212ENST00000555254 MDN1Q9NU22 5596 aa7.29□□□□□ -1.24
PSEN1-212ENST00000555254 MT1XP80297 61 aa7.26□□□□□ -1.25
PSEN1-212ENST00000555254 GPR98Q8WXG9 6306 aa7.22□□□□□ -1.25
PSEN1-212ENST00000555254 TNP1P09430 55 aa7.21□□□□□ -1.26
PSEN1-212ENST00000555254 KRTAP25-1Q3LHN0 102 aa7.2□□□□□ -1.26
PSEN1-212ENST00000555254 KTN1-AS1Q86SY8 53 aa7.18□□□□□ -1.26
PSEN1-212ENST00000555254 KRTAP5-9P26371 169 aa7.16□□□□□ -1.26
PSEN1-212ENST00000555254 PRAC1Q96KF2 57 aa7.03□□□□□ -1.28
PSEN1-212ENST00000555254 KRTAP2-2Q9BYT5 123 aa7.03□□□□□ -1.28
PSEN1-212ENST00000555254 KRTAP2-1Q9BYU5 128 aa7.03□□□□□ -1.28
PSEN1-212ENST00000555254 KRTAP10-7P60409 375 aaPredicted RBP6.96□□□□□ -1.3
PSEN1-212ENST00000555254 PP632Q6XCG6 107 aa6.95□□□□□ -1.3
PSEN1-212ENST00000555254 KRTAP23-1A1A580 65 aa6.94□□□□□ -1.3
PSEN1-212ENST00000555254 KRTAP10-12P60413 245 aa6.93□□□□□ -1.3
PSEN1-212ENST00000555254 KRTAP8-1Q8IUC2 63 aa6.85□□□□□ -1.31
PSEN1-212ENST00000555254 SPRR2EP22531 72 aa6.84□□□□□ -1.31
PSEN1-212ENST00000555254 SPRR2BP35325 72 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms