RNA–Protein interactions for RNA: ENST00000554257.1

LINC00517-202, long intergenic non-protein coding RNA 517, humanhuman

TSL 2 BASIC

Gene LINC00517, Length 3,460 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-202ENST00000554257 SPANXA2-OT1Q8N9U9 137 aa3.28□□□□□ -1.88
LINC00517-202ENST00000554257 LCE2BO14633 110 aa3.27□□□□□ -1.89
LINC00517-202ENST00000554257 KRTAP9-8Q9BYQ0 159 aa3.27□□□□□ -1.89
LINC00517-202ENST00000554257 RBM12B-AS1Q9P1G2 102 aa3.26□□□□□ -1.89
LINC00517-202ENST00000554257 KRTAP9-2Q9BYQ4 174 aa3.26□□□□□ -1.89
LINC00517-202ENST00000554257 KRTAP10-6P60371 365 aaPredicted RBP3.25□□□□□ -1.89
LINC00517-202ENST00000554257 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.25□□□□□ -1.89
LINC00517-202ENST00000554257 LCA10Q71F78 164 aa3.25□□□□□ -1.89
LINC00517-202ENST00000554257 A8MUN3 132 aa3.24□□□□□ -1.89
LINC00517-202ENST00000554257 KRTAP9-6A0A140TA67 174 aa3.23□□□□□ -1.89
LINC00517-202ENST00000554257 NDUFC1O43677 76 aa3.23□□□□□ -1.89
LINC00517-202ENST00000554257 S4R3F8 94 aa3.2□□□□□ -1.9
LINC00517-202ENST00000554257 MT2AP02795 61 aa3.2□□□□□ -1.9
LINC00517-202ENST00000554257 KRTAP4-8A0A0G2JLE6 195 aa3.19□□□□□ -1.9
LINC00517-202ENST00000554257 MT1FP04733 61 aa3.18□□□□□ -1.9
LINC00517-202ENST00000554257 FAM236DA0A1B0GTK5 79 aa3.17□□□□□ -1.9
LINC00517-202ENST00000554257 FAM236CP0DP71 79 aa3.17□□□□□ -1.9
LINC00517-202ENST00000554257 TMEM258P61165 79 aa3.16□□□□□ -1.9
LINC00517-202ENST00000554257 H0YAA0 97 aa3.15□□□□□ -1.9
LINC00517-202ENST00000554257 ACYP2P14621 99 aa3.15□□□□□ -1.9
LINC00517-202ENST00000554257 KRTAP9-3Q9BYQ3 159 aa3.15□□□□□ -1.91
LINC00517-202ENST00000554257 COA5Q86WW8 74 aa3.14□□□□□ -1.91
LINC00517-202ENST00000554257 ATP5EP56381 51 aaPredicted RBP3.14□□□□□ -1.91
LINC00517-202ENST00000554257 KRTAP4-7Q9BYR0 210 aa3.13□□□□□ -1.91
LINC00517-202ENST00000554257 LCE3BQ5TA77 95 aa3.1□□□□□ -1.91
LINC00517-202ENST00000554257 KRTAP19-1Q8IUB9 90 aa3.1□□□□□ -1.91
LINC00517-202ENST00000554257 KRTAP9-9Q9BYP9 154 aa3.1□□□□□ -1.91
LINC00517-202ENST00000554257 KRTAP9-4Q9BYQ2 154 aa3.1□□□□□ -1.91
LINC00517-202ENST00000554257 CSAG1Q6PB30 78 aa3.09□□□□□ -1.91
LINC00517-202ENST00000554257 KRTAP4-12Q9BQ66 201 aa3.08□□□□□ -1.92
LINC00517-202ENST00000554257 USH2AO75445 5202 aa3.08□□□□□ -1.92
LINC00517-202ENST00000554257 SPRR2GQ9BYE4 73 aa3.07□□□□□ -1.92
LINC00517-202ENST00000554257 M0R2T5 61 aa3.07□□□□□ -1.92
LINC00517-202ENST00000554257 P0C880 135 aa3.06□□□□□ -1.92
LINC00517-202ENST00000554257 SSPOA2VEC9 5147 aa3.06□□□□□ -1.92
LINC00517-202ENST00000554257 SERP1Q9Y6X1 66 aa3.06□□□□□ -1.92
LINC00517-202ENST00000554257 KRTAP19-8Q3LI54 63 aa3.03□□□□□ -1.92
LINC00517-202ENST00000554257 ADM2Q7Z4H4 148 aa3.03□□□□□ -1.92
LINC00517-202ENST00000554257 KRTAP10-10P60014 251 aa3.02□□□□□ -1.93
LINC00517-202ENST00000554257 KRTAP13-4Q3LI77 160 aa3.02□□□□□ -1.93
LINC00517-202ENST00000554257 MT1BP07438 61 aa3.01□□□□□ -1.93
LINC00517-202ENST00000554257 LINC01558Q9Y6Z2 57 aa3.01□□□□□ -1.93
LINC00517-202ENST00000554257 Q1T7F1 81 aa3□□□□□ -1.93
LINC00517-202ENST00000554257 CHKB-CPT1BH3BT56 60 aa3□□□□□ -1.93
LINC00517-202ENST00000554257 SPTSSBQ8NFR3 76 aa3□□□□□ -1.93
LINC00517-202ENST00000554257 CRIPTQ9P021 101 aa3□□□□□ -1.93
LINC00517-202ENST00000554257 LCE1DQ5T752 114 aa2.98□□□□□ -1.93
LINC00517-202ENST00000554257 KRTAP4-9Q9BYQ8 210 aa2.98□□□□□ -1.93
LINC00517-202ENST00000554257 KRTAP4-2Q9BYR5 136 aa2.96□□□□□ -1.94
LINC00517-202ENST00000554257 KRTAP5-3Q6L8H2 238 aa2.94□□□□□ -1.94
LINC00517-202ENST00000554257 SMIM26A0A096LP01 95 aa2.92□□□□□ -1.94
LINC00517-202ENST00000554257 KRTAP19-6Q3LI70 58 aa2.92□□□□□ -1.94
LINC00517-202ENST00000554257 Q5VV11 94 aa2.92□□□□□ -1.94
LINC00517-202ENST00000554257 M0QZ58 72 aa2.91□□□□□ -1.94
LINC00517-202ENST00000554257 A0A1B0GU69 56 aa2.9□□□□□ -1.95
LINC00517-202ENST00000554257 A6NN06 94 aa2.89□□□□□ -1.95
LINC00517-202ENST00000554257 A0A1B0GU33 70 aa2.88□□□□□ -1.95
LINC00517-202ENST00000554257 MT1XP80297 61 aa2.88□□□□□ -1.95
LINC00517-202ENST00000554257 SPATA8Q6RVD6 105 aa2.88□□□□□ -1.95
LINC00517-202ENST00000554257 KRTAP10-5P60370 271 aa2.87□□□□□ -1.95
LINC00517-202ENST00000554257 R4GN34 69 aa2.87□□□□□ -1.95
LINC00517-202ENST00000554257 FCGBPQ9Y6R7 5405 aaPredicted RBP2.87□□□□□ -1.95
LINC00517-202ENST00000554257 V9GYY9 64 aa2.86□□□□□ -1.95
LINC00517-202ENST00000554257 KRTAP12-1P59990 96 aa2.86□□□□□ -1.95
LINC00517-202ENST00000554257 PRR15LQ9BU68 103 aa2.85□□□□□ -1.95
LINC00517-202ENST00000554257 CRCT1Q9UGL9 99 aa2.85□□□□□ -1.95
LINC00517-202ENST00000554257 KRTAP12-2P59991 146 aa2.84□□□□□ -1.95
LINC00517-202ENST00000554257 PSPHP1O15172 72 aa2.84□□□□□ -1.96
LINC00517-202ENST00000554257 A8MU10 97 aa2.83□□□□□ -1.96
LINC00517-202ENST00000554257 SEC61GP60059 68 aa2.83□□□□□ -1.96
LINC00517-202ENST00000554257 FSIP2Q5CZC0 6907 aa2.81□□□□□ -1.96
LINC00517-202ENST00000554257 UQCR11O14957 56 aa2.79□□□□□ -1.96
LINC00517-202ENST00000554257 PRO0628Q9UI54 55 aa2.78□□□□□ -1.96
LINC00517-202ENST00000554257 KRTAP4-11Q9BYQ6 195 aa2.77□□□□□ -1.97
LINC00517-202ENST00000554257 MIR22HGQ0VDD5 57 aa2.76□□□□□ -1.97
LINC00517-202ENST00000554257 LINC01554Q52M75 96 aa2.76□□□□□ -1.97
LINC00517-202ENST00000554257 A0A0D9SG42 100 aa2.75□□□□□ -1.97
LINC00517-202ENST00000554257 KRTAP10-12P60413 245 aa2.74□□□□□ -1.97
LINC00517-202ENST00000554257 PLAC4Q8WY50 150 aa2.74□□□□□ -1.97
LINC00517-202ENST00000554257 CDC42SE1Q9NRR8 79 aa2.73□□□□□ -1.97
LINC00517-202ENST00000554257 KRTAP10-7P60409 375 aaPredicted RBP2.73□□□□□ -1.97
LINC00517-202ENST00000554257 C10orf95Q9H7T3 257 aa2.72□□□□□ -1.97
LINC00517-202ENST00000554257 KMT2DO14686 5537 aa2.72□□□□□ -1.97
LINC00517-202ENST00000554257 A6NED7 52 aa2.7□□□□□ -1.98
LINC00517-202ENST00000554257 MACF1Q9UPN3 7388 aaKnown RBP2.68□□□□□ -1.98
LINC00517-202ENST00000554257 SPINT4Q6UDR6 99 aa2.68□□□□□ -1.98
LINC00517-202ENST00000554257 PRO2289Q9P1D8 64 aa2.67□□□□□ -1.98
LINC00517-202ENST00000554257 KRTAP5-9P26371 169 aa2.63□□□□□ -1.99
LINC00517-202ENST00000554257 CAMK2N1Q7Z7J9 78 aa2.62□□□□□ -1.99
LINC00517-202ENST00000554257 SYNE2Q8WXH0 6885 aaKnown RBP2.59□□□□□ -2
LINC00517-202ENST00000554257 KRTAP19-7Q3SYF9 63 aa2.58□□□□□ -2
LINC00517-202ENST00000554257 KRTAP6-3Q3LI67 103 aa2.58□□□□□ -2
LINC00517-202ENST00000554257 BRK1Q8WUW1 75 aa2.57□□□□□ -2
LINC00517-202ENST00000554257 LCE3AQ5TA76 89 aa2.56□□□□□ -2
LINC00517-202ENST00000554257 MUC12Q9UKN1 5478 aa2.55□□□□□ -2
LINC00517-202ENST00000554257 KRTAP23-1A1A580 65 aa2.54□□□□□ -2
LINC00517-202ENST00000554257 ROMO1P60602 79 aa2.54□□□□□ -2
LINC00517-202ENST00000554257 KRTAP25-1Q3LHN0 102 aa2.54□□□□□ -2
LINC00517-202ENST00000554257 KRTAP9-7A8MTY7 169 aa2.53□□□□□ -2
LINC00517-202ENST00000554257 KRTAP8-1Q8IUC2 63 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms