RNA–Protein interactions for RNA: ENST00000553840.5

FOXN3-204, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-204ENST00000553840 CSAG1Q6PB30 78 aa8.18□□□□□ -1.1
FOXN3-204ENST00000553840 KRTAP3-1Q9BYR8 98 aa8.18□□□□□ -1.1
FOXN3-204ENST00000553840 ANAPC13Q9BS18 74 aa8.17□□□□□ -1.1
FOXN3-204ENST00000553840 ATOX1O00244 68 aa8.16□□□□□ -1.1
FOXN3-204ENST00000553840 H0Y9P7 68 aa8.15□□□□□ -1.1
FOXN3-204ENST00000553840 LOC101927531A0A1B0GV80 90 aa8.13□□□□□ -1.11
FOXN3-204ENST00000553840 LCA10Q71F78 164 aa8.13□□□□□ -1.11
FOXN3-204ENST00000553840 CYP4F30PQ9H0H9 118 aa8.13□□□□□ -1.11
FOXN3-204ENST00000553840 SMIM20Q8N5G0 67 aa8.11□□□□□ -1.11
FOXN3-204ENST00000553840 OCR1Q9BZK8 76 aa8.1□□□□□ -1.11
FOXN3-204ENST00000553840 MP68P56378 58 aa8.06□□□□□ -1.12
FOXN3-204ENST00000553840 LINC00208Q96KT6 92 aa8.05□□□□□ -1.12
FOXN3-204ENST00000553840 SERP2Q8N6R1 65 aa8.01□□□□□ -1.13
FOXN3-204ENST00000553840 Q5VV11 94 aa8□□□□□ -1.13
FOXN3-204ENST00000553840 MACF1Q9UPN3 7388 aaKnown RBP8□□□□□ -1.13
FOXN3-204ENST00000553840 TRAV7A0A075B6U4 112 aa7.99□□□□□ -1.13
FOXN3-204ENST00000553840 COX7CP15954 63 aa7.98□□□□□ -1.13
FOXN3-204ENST00000553840 KLKP1Q107X0 134 aa7.98□□□□□ -1.13
FOXN3-204ENST00000553840 SPRR2GQ9BYE4 73 aa7.98□□□□□ -1.13
FOXN3-204ENST00000553840 H3BPC8 53 aa7.94□□□□□ -1.14
FOXN3-204ENST00000553840 A6NN06 94 aa7.93□□□□□ -1.14
FOXN3-204ENST00000553840 KRTAP19-8Q3LI54 63 aa7.93□□□□□ -1.14
FOXN3-204ENST00000553840 MT1BP07438 61 aa7.92□□□□□ -1.14
FOXN3-204ENST00000553840 KRTAP6-3Q3LI67 103 aa7.92□□□□□ -1.14
FOXN3-204ENST00000553840 CRIPTQ9P021 101 aa7.91□□□□□ -1.14
FOXN3-204ENST00000553840 CCDC179H3BU77 68 aa7.89□□□□□ -1.15
FOXN3-204ENST00000553840 NDUFC1O43677 76 aa7.88□□□□□ -1.15
FOXN3-204ENST00000553840 SYNE2Q8WXH0 6885 aaKnown RBP7.86□□□□□ -1.15
FOXN3-204ENST00000553840 A8MUN3 132 aa7.84□□□□□ -1.15
FOXN3-204ENST00000553840 C20orf197Q8N268 126 aa7.83□□□□□ -1.16
FOXN3-204ENST00000553840 H0YAA0 97 aa7.79□□□□□ -1.16
FOXN3-204ENST00000553840 KRTAP10-5P60370 271 aa7.79□□□□□ -1.16
FOXN3-204ENST00000553840 KRTAP4-8Q9BYQ9 185 aa7.78□□□□□ -1.16
FOXN3-204ENST00000553840 SNURFQ9Y675 71 aa7.74□□□□□ -1.17
FOXN3-204ENST00000553840 TMEM258P61165 79 aa7.71□□□□□ -1.18
FOXN3-204ENST00000553840 DMAC1Q96GE9 116 aa7.71□□□□□ -1.18
FOXN3-204ENST00000553840 ADM2Q7Z4H4 148 aa7.7□□□□□ -1.18
FOXN3-204ENST00000553840 ATP5EP56381 51 aaPredicted RBP7.65□□□□□ -1.18
FOXN3-204ENST00000553840 H7BZZ5 65 aa7.62□□□□□ -1.19
FOXN3-204ENST00000553840 ACYP2P14621 99 aa7.61□□□□□ -1.19
FOXN3-204ENST00000553840 CYSTM1Q9H1C7 97 aa7.59□□□□□ -1.19
FOXN3-204ENST00000553840 PRO2289Q9P1D8 64 aa7.56□□□□□ -1.2
FOXN3-204ENST00000553840 R4GN34 69 aa7.56□□□□□ -1.2
FOXN3-204ENST00000553840 PLAC4Q8WY50 150 aa7.55□□□□□ -1.2
FOXN3-204ENST00000553840 SPANXA2-OT1Q8N9U9 137 aa7.54□□□□□ -1.2
FOXN3-204ENST00000553840 KRTAP5-9P26371 169 aa7.52□□□□□ -1.21
FOXN3-204ENST00000553840 CHKB-CPT1BH3BT56 60 aa7.51□□□□□ -1.21
FOXN3-204ENST00000553840 KRTAP4-12Q9BQ66 201 aa7.49□□□□□ -1.21
FOXN3-204ENST00000553840 P0C880 135 aa7.48□□□□□ -1.21
FOXN3-204ENST00000553840 SERP1Q9Y6X1 66 aa7.48□□□□□ -1.21
FOXN3-204ENST00000553840 M0QZ58 72 aa7.47□□□□□ -1.21
FOXN3-204ENST00000553840 RPS28P62857 69 aaKnown RBP7.47□□□□□ -1.21
FOXN3-204ENST00000553840 SPTSSBQ8NFR3 76 aa7.47□□□□□ -1.21
FOXN3-204ENST00000553840 MT1XP80297 61 aa7.42□□□□□ -1.22
FOXN3-204ENST00000553840 LCE3BQ5TA77 95 aa7.42□□□□□ -1.22
FOXN3-204ENST00000553840 NEBP20929 6669 aa7.38□□□□□ -1.23
FOXN3-204ENST00000553840 KRTAP20-1Q3LI63 56 aa7.38□□□□□ -1.23
FOXN3-204ENST00000553840 LINC01554Q52M75 96 aa7.37□□□□□ -1.23
FOXN3-204ENST00000553840 MUC12Q9UKN1 5478 aa7.36□□□□□ -1.23
FOXN3-204ENST00000553840 COA5Q86WW8 74 aa7.34□□□□□ -1.23
FOXN3-204ENST00000553840 SPRR2FQ96RM1 72 aa7.32□□□□□ -1.24
FOXN3-204ENST00000553840 SMIM26A0A096LP01 95 aa7.3□□□□□ -1.24
FOXN3-204ENST00000553840 KRTAP12-2P59991 146 aa7.29□□□□□ -1.24
FOXN3-204ENST00000553840 KRTAP8-1Q8IUC2 63 aa7.28□□□□□ -1.24
FOXN3-204ENST00000553840 KRTAP9-9Q9BYP9 154 aa7.26□□□□□ -1.25
FOXN3-204ENST00000553840 KRTAP9-4Q9BYQ2 154 aa7.26□□□□□ -1.25
FOXN3-204ENST00000553840 KMT2DO14686 5537 aa7.25□□□□□ -1.25
FOXN3-204ENST00000553840 SPRR2EP22531 72 aa7.22□□□□□ -1.25
FOXN3-204ENST00000553840 SPRR2BP35325 72 aa7.22□□□□□ -1.25
FOXN3-204ENST00000553840 SPRR2AP35326 72 aa7.22□□□□□ -1.25
FOXN3-204ENST00000553840 V9GYY9 64 aa7.21□□□□□ -1.26
FOXN3-204ENST00000553840 KRTAP2-3P0C7H8 128 aa7.18□□□□□ -1.26
FOXN3-204ENST00000553840 KRTAP2-4Q9BYR9 128 aa7.18□□□□□ -1.26
FOXN3-204ENST00000553840 SEC61GP60059 68 aa7.13□□□□□ -1.27
FOXN3-204ENST00000553840 MDN1Q9NU22 5596 aa7.12□□□□□ -1.27
FOXN3-204ENST00000553840 KRTAP4-8A0A0G2JLE6 195 aa7.12□□□□□ -1.27
FOXN3-204ENST00000553840 Q1T7F1 81 aa7.1□□□□□ -1.27
FOXN3-204ENST00000553840 KRTAP10-7P60409 375 aaPredicted RBP7.08□□□□□ -1.28
FOXN3-204ENST00000553840 LCE1AQ5T7P2 110 aa7.08□□□□□ -1.28
FOXN3-204ENST00000553840 KRTAP10-12P60413 245 aa7.07□□□□□ -1.28
FOXN3-204ENST00000553840 PRR15LQ9BU68 103 aa7.03□□□□□ -1.28
FOXN3-204ENST00000553840 KRTAP13-4Q3LI77 160 aa7.01□□□□□ -1.29
FOXN3-204ENST00000553840 LINC01558Q9Y6Z2 57 aa7.01□□□□□ -1.29
FOXN3-204ENST00000553840 SPRR2DP22532 72 aa6.99□□□□□ -1.29
FOXN3-204ENST00000553840 A0A1B0GU69 56 aa6.98□□□□□ -1.29
FOXN3-204ENST00000553840 A0A1B0GU33 70 aa6.96□□□□□ -1.3
FOXN3-204ENST00000553840 PSPHP1O15172 72 aa6.95□□□□□ -1.3
FOXN3-204ENST00000553840 LCE1DQ5T752 114 aa6.95□□□□□ -1.3
FOXN3-204ENST00000553840 CAMK2N1Q7Z7J9 78 aa6.95□□□□□ -1.3
FOXN3-204ENST00000553840 KRTAP2-2Q9BYT5 123 aa6.95□□□□□ -1.3
FOXN3-204ENST00000553840 KRTAP2-1Q9BYU5 128 aa6.95□□□□□ -1.3
FOXN3-204ENST00000553840 SPATA8Q6RVD6 105 aa6.91□□□□□ -1.3
FOXN3-204ENST00000553840 A0A0D9SG42 100 aa6.89□□□□□ -1.31
FOXN3-204ENST00000553840 KRTAP4-7Q9BYR0 210 aa6.87□□□□□ -1.31
FOXN3-204ENST00000553840 H3BS24 57 aa6.84□□□□□ -1.31
FOXN3-204ENST00000553840 A6NED7 52 aa6.82□□□□□ -1.32
FOXN3-204ENST00000553840 KRTAP19-4Q3LI73 84 aa6.78□□□□□ -1.32
FOXN3-204ENST00000553840 LCE4AQ5TA78 99 aa6.78□□□□□ -1.32
FOXN3-204ENST00000553840 SPINT4Q6UDR6 99 aa6.77□□□□□ -1.33
FOXN3-204ENST00000553840 BRK1Q8WUW1 75 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms