RNA–Protein interactions for RNA: ENST00000553745.5

ABCD4-219, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 2

Gene ABCD4, Length 1,770 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-219ENST00000553745 LCA10Q71F78 164 aa7.38□□□□□ -1.23
ABCD4-219ENST00000553745 A6NED7 52 aa7.37□□□□□ -1.23
ABCD4-219ENST00000553745 SPINK7P58062 85 aa7.35□□□□□ -1.23
ABCD4-219ENST00000553745 SEC61BP60468 96 aaKnown RBP7.35□□□□□ -1.23
ABCD4-219ENST00000553745 CDC42SE1Q9NRR8 79 aa7.33□□□□□ -1.24
ABCD4-219ENST00000553745 KRTAP3-1Q9BYR8 98 aa7.32□□□□□ -1.24
ABCD4-219ENST00000553745 UBR4Q5T4S7 5183 aa7.28□□□□□ -1.24
ABCD4-219ENST00000553745 A0A1B0GU69 56 aa7.28□□□□□ -1.24
ABCD4-219ENST00000553745 KRTAP4-1Q9BYQ7 146 aa7.25□□□□□ -1.25
ABCD4-219ENST00000553745 RNF213Q63HN8 5207 aa7.23□□□□□ -1.25
ABCD4-219ENST00000553745 COX6B2Q6YFQ2 88 aa7.21□□□□□ -1.25
ABCD4-219ENST00000553745 SPTSSBQ8NFR3 76 aa7.2□□□□□ -1.26
ABCD4-219ENST00000553745 MUC2Q02817 5179 aa7.2□□□□□ -1.26
ABCD4-219ENST00000553745 PMAIP1Q13794 54 aa7.18□□□□□ -1.26
ABCD4-219ENST00000553745 SPATA8Q6RVD6 105 aa7.18□□□□□ -1.26
ABCD4-219ENST00000553745 A6NN06 94 aa7.14□□□□□ -1.27
ABCD4-219ENST00000553745 UQCR11O14957 56 aa7.14□□□□□ -1.27
ABCD4-219ENST00000553745 SEC61GP60059 68 aa7.1□□□□□ -1.27
ABCD4-219ENST00000553745 MIR22HGQ0VDD5 57 aa7.1□□□□□ -1.27
ABCD4-219ENST00000553745 RBM12B-AS1Q9P1G2 102 aa7.08□□□□□ -1.28
ABCD4-219ENST00000553745 KRTAP3-3Q9BYR6 98 aa7.03□□□□□ -1.28
ABCD4-219ENST00000553745 KRTAP19-2Q3LHN2 52 aa7.02□□□□□ -1.29
ABCD4-219ENST00000553745 KTN1-AS1Q86SY8 53 aa7□□□□□ -1.29
ABCD4-219ENST00000553745 A0A1B0GU33 70 aa6.97□□□□□ -1.29
ABCD4-219ENST00000553745 H0YAA0 97 aa6.97□□□□□ -1.29
ABCD4-219ENST00000553745 H1FX-AS1Q4G0G2 97 aa6.97□□□□□ -1.29
ABCD4-219ENST00000553745 FAT4Q6V0I7 4981 aa6.96□□□□□ -1.3
ABCD4-219ENST00000553745 S4R3F8 94 aa6.95□□□□□ -1.3
ABCD4-219ENST00000553745 FLGP20930 4061 aaPredicted RBP6.94□□□□□ -1.3
ABCD4-219ENST00000553745 LCE2CQ5TA81 110 aa6.91□□□□□ -1.3
ABCD4-219ENST00000553745 KRTAP10-6P60371 365 aaPredicted RBP6.9□□□□□ -1.31
ABCD4-219ENST00000553745 KRTAP3-2Q9BYR7 98 aa6.88□□□□□ -1.31
ABCD4-219ENST00000553745 MT1HP80294 61 aa6.8□□□□□ -1.32
ABCD4-219ENST00000553745 KRTAP13-4Q3LI77 160 aa6.77□□□□□ -1.33
ABCD4-219ENST00000553745 P0C880 135 aa6.76□□□□□ -1.33
ABCD4-219ENST00000553745 ADM2Q7Z4H4 148 aa6.76□□□□□ -1.33
ABCD4-219ENST00000553745 CSAG1Q6PB30 78 aa6.74□□□□□ -1.33
ABCD4-219ENST00000553745 PRAC1Q96KF2 57 aa6.73□□□□□ -1.33
ABCD4-219ENST00000553745 M0R2T5 61 aa6.69□□□□□ -1.34
ABCD4-219ENST00000553745 K7ERS5 55 aa6.64□□□□□ -1.35
ABCD4-219ENST00000553745 LCE2AQ5TA79 106 aaPredicted RBP6.63□□□□□ -1.35
ABCD4-219ENST00000553745 A0A0D9SG42 100 aa6.62□□□□□ -1.35
ABCD4-219ENST00000553745 M0QZ58 72 aa6.57□□□□□ -1.36
ABCD4-219ENST00000553745 LORP23490 312 aaPredicted RBP6.53□□□□□ -1.36
ABCD4-219ENST00000553745 KRTAP12-1P59990 96 aa6.51□□□□□ -1.37
ABCD4-219ENST00000553745 KRTAP9-8Q9BYQ0 159 aa6.51□□□□□ -1.37
ABCD4-219ENST00000553745 KRTAP12-2P59991 146 aa6.5□□□□□ -1.37
ABCD4-219ENST00000553745 ROMO1P60602 79 aa6.5□□□□□ -1.37
ABCD4-219ENST00000553745 MT2AP02795 61 aa6.49□□□□□ -1.37
ABCD4-219ENST00000553745 LINC01554Q52M75 96 aa6.47□□□□□ -1.37
ABCD4-219ENST00000553745 MT1FP04733 61 aa6.46□□□□□ -1.38
ABCD4-219ENST00000553745 KRTAP25-1Q3LHN0 102 aa6.46□□□□□ -1.38
ABCD4-219ENST00000553745 SPINT4Q6UDR6 99 aa6.42□□□□□ -1.38
ABCD4-219ENST00000553745 KRTAP10-10P60014 251 aa6.41□□□□□ -1.38
ABCD4-219ENST00000553745 R4GN34 69 aa6.4□□□□□ -1.38
ABCD4-219ENST00000553745 CRIPTQ9P021 101 aa6.37□□□□□ -1.39
ABCD4-219ENST00000553745 KRTAP19-1Q8IUB9 90 aa6.27□□□□□ -1.41
ABCD4-219ENST00000553745 KRTAP9-3Q9BYQ3 159 aa6.27□□□□□ -1.41
ABCD4-219ENST00000553745 KRTAP9-2Q9BYQ4 174 aa6.27□□□□□ -1.41
ABCD4-219ENST00000553745 SPRR2GQ9BYE4 73 aa6.26□□□□□ -1.41
ABCD4-219ENST00000553745 C10orf95Q9H7T3 257 aa6.22□□□□□ -1.41
ABCD4-219ENST00000553745 LCE2BO14633 110 aa6.14□□□□□ -1.43
ABCD4-219ENST00000553745 KRTAP19-8Q3LI54 63 aa6.12□□□□□ -1.43
ABCD4-219ENST00000553745 KRTAP9-6A0A140TA67 174 aa6.11□□□□□ -1.43
ABCD4-219ENST00000553745 USH2AO75445 5202 aa6.1□□□□□ -1.43
ABCD4-219ENST00000553745 MT1BP07438 61 aa6.07□□□□□ -1.44
ABCD4-219ENST00000553745 LCE2DQ5TA82 110 aaPredicted RBP6.06□□□□□ -1.44
ABCD4-219ENST00000553745 CAMK2N1Q7Z7J9 78 aa6.03□□□□□ -1.44
ABCD4-219ENST00000553745 PLAC4Q8WY50 150 aa6□□□□□ -1.45
ABCD4-219ENST00000553745 FSIP2Q5CZC0 6907 aa5.95□□□□□ -1.46
ABCD4-219ENST00000553745 SSPOA2VEC9 5147 aa5.94□□□□□ -1.46
ABCD4-219ENST00000553745 CRCT1Q9UGL9 99 aa5.9□□□□□ -1.46
ABCD4-219ENST00000553745 H3BS24 57 aa5.9□□□□□ -1.47
ABCD4-219ENST00000553745 KRTAP15-1Q3LI76 137 aa5.86□□□□□ -1.47
ABCD4-219ENST00000553745 PP632Q6XCG6 107 aa5.85□□□□□ -1.47
ABCD4-219ENST00000553745 MT1XP80297 61 aa5.84□□□□□ -1.47
ABCD4-219ENST00000553745 TNP1P09430 55 aa5.82□□□□□ -1.48
ABCD4-219ENST00000553745 KRTAP10-5P60370 271 aa5.82□□□□□ -1.48
ABCD4-219ENST00000553745 KRTAP19-6Q3LI70 58 aa5.79□□□□□ -1.48
ABCD4-219ENST00000553745 KRTAP23-1A1A580 65 aa5.78□□□□□ -1.48
ABCD4-219ENST00000553745 PRO2289Q9P1D8 64 aa5.75□□□□□ -1.49
ABCD4-219ENST00000553745 FCGBPQ9Y6R7 5405 aaPredicted RBP5.68□□□□□ -1.5
ABCD4-219ENST00000553745 KRTAP10-7P60409 375 aaPredicted RBP5.6□□□□□ -1.51
ABCD4-219ENST00000553745 LCE3AQ5TA76 89 aa5.55□□□□□ -1.52
ABCD4-219ENST00000553745 NDUFAF8A1L188 74 aa5.54□□□□□ -1.52
ABCD4-219ENST00000553745 KRTAP10-12P60413 245 aa5.53□□□□□ -1.52
ABCD4-219ENST00000553745 KMT2DO14686 5537 aa5.53□□□□□ -1.52
ABCD4-219ENST00000553745 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.5□□□□□ -1.53
ABCD4-219ENST00000553745 KRTAP9-7A8MTY7 169 aa5.49□□□□□ -1.53
ABCD4-219ENST00000553745 KRTAP8-1Q8IUC2 63 aa5.47□□□□□ -1.53
ABCD4-219ENST00000553745 KRTAP4-8A0A0G2JLE6 195 aa5.42□□□□□ -1.54
ABCD4-219ENST00000553745 SPRR5A0A1B0GTR4 108 aa5.42□□□□□ -1.54
ABCD4-219ENST00000553745 KRTAP4-8Q9BYQ9 185 aa5.42□□□□□ -1.54
ABCD4-219ENST00000553745 MACF1Q9UPN3 7388 aaKnown RBP5.4□□□□□ -1.55
ABCD4-219ENST00000553745 LUZP6Q538Z0 58 aa5.32□□□□□ -1.56
ABCD4-219ENST00000553745 SYNE2Q8WXH0 6885 aaKnown RBP5.3□□□□□ -1.56
ABCD4-219ENST00000553745 KRTAP12-3P60328 96 aa5.29□□□□□ -1.56
ABCD4-219ENST00000553745 KRTAP19-5Q3LI72 72 aa5.24□□□□□ -1.57
ABCD4-219ENST00000553745 KRTAP19-7Q3SYF9 63 aa5.21□□□□□ -1.57
ABCD4-219ENST00000553745 MUC12Q9UKN1 5478 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms