RNA–Protein interactions for RNA: ENST00000552286.5

MTA1-220, Transcript of metastasis associated 1, humanhuman

TSL 2

Gene MTA1, Length 1,943 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTA1-220ENST00000552286 COX6B2Q6YFQ2 88 aa10.21□□□□□ -0.78
MTA1-220ENST00000552286 A6NED7 52 aa10.19□□□□□ -0.78
MTA1-220ENST00000552286 A0A1B0GU69 56 aa10.17□□□□□ -0.78
MTA1-220ENST00000552286 SPTSSBQ8NFR3 76 aa10.13□□□□□ -0.79
MTA1-220ENST00000552286 A8MU10 97 aa10.12□□□□□ -0.79
MTA1-220ENST00000552286 SEC61BP60468 96 aaKnown RBP10.11□□□□□ -0.79
MTA1-220ENST00000552286 LCA10Q71F78 164 aa10.1□□□□□ -0.79
MTA1-220ENST00000552286 MUC17Q685J3 4493 aa10.07□□□□□ -0.8
MTA1-220ENST00000552286 CDC42SE1Q9NRR8 79 aa10.05□□□□□ -0.8
MTA1-220ENST00000552286 SEC61GP60059 68 aa9.97□□□□□ -0.81
MTA1-220ENST00000552286 UQCR11O14957 56 aa9.92□□□□□ -0.82
MTA1-220ENST00000552286 KRTAP4-1Q9BYQ7 146 aa9.92□□□□□ -0.82
MTA1-220ENST00000552286 UBR4Q5T4S7 5183 aa9.9□□□□□ -0.82
MTA1-220ENST00000552286 MUC2Q02817 5179 aa9.9□□□□□ -0.82
MTA1-220ENST00000552286 KRTAP3-3Q9BYR6 98 aa9.89□□□□□ -0.83
MTA1-220ENST00000552286 SPATA8Q6RVD6 105 aa9.88□□□□□ -0.83
MTA1-220ENST00000552286 S4R3F8 94 aa9.86□□□□□ -0.83
MTA1-220ENST00000552286 MIR22HGQ0VDD5 57 aa9.85□□□□□ -0.83
MTA1-220ENST00000552286 H1FX-AS1Q4G0G2 97 aa9.84□□□□□ -0.83
MTA1-220ENST00000552286 PMAIP1Q13794 54 aa9.81□□□□□ -0.84
MTA1-220ENST00000552286 RBM12B-AS1Q9P1G2 102 aa9.81□□□□□ -0.84
MTA1-220ENST00000552286 RNF213Q63HN8 5207 aa9.77□□□□□ -0.84
MTA1-220ENST00000552286 A0A1B0GU33 70 aa9.74□□□□□ -0.85
MTA1-220ENST00000552286 A6NN06 94 aa9.71□□□□□ -0.86
MTA1-220ENST00000552286 H0YAA0 97 aa9.68□□□□□ -0.86
MTA1-220ENST00000552286 KRTAP10-6P60371 365 aaPredicted RBP9.65□□□□□ -0.86
MTA1-220ENST00000552286 KRTAP3-2Q9BYR7 98 aa9.63□□□□□ -0.87
MTA1-220ENST00000552286 KRTAP19-2Q3LHN2 52 aa9.6□□□□□ -0.87
MTA1-220ENST00000552286 CSAG1Q6PB30 78 aa9.58□□□□□ -0.88
MTA1-220ENST00000552286 P0C880 135 aa9.5□□□□□ -0.89
MTA1-220ENST00000552286 KTN1-AS1Q86SY8 53 aa9.5□□□□□ -0.89
MTA1-220ENST00000552286 ADM2Q7Z4H4 148 aa9.49□□□□□ -0.89
MTA1-220ENST00000552286 FLGP20930 4061 aaPredicted RBP9.49□□□□□ -0.89
MTA1-220ENST00000552286 FAT4Q6V0I7 4981 aa9.48□□□□□ -0.89
MTA1-220ENST00000552286 KRTAP13-4Q3LI77 160 aa9.45□□□□□ -0.9
MTA1-220ENST00000552286 LCE2CQ5TA81 110 aa9.44□□□□□ -0.9
MTA1-220ENST00000552286 A0A0D9SG42 100 aa9.3□□□□□ -0.92
MTA1-220ENST00000552286 K7ERS5 55 aa9.3□□□□□ -0.92
MTA1-220ENST00000552286 MT1HP80294 61 aa9.28□□□□□ -0.92
MTA1-220ENST00000552286 M0QZ58 72 aa9.25□□□□□ -0.93
MTA1-220ENST00000552286 M0R2T5 61 aa9.21□□□□□ -0.93
MTA1-220ENST00000552286 PRAC1Q96KF2 57 aa9.18□□□□□ -0.94
MTA1-220ENST00000552286 R4GN34 69 aa9.11□□□□□ -0.95
MTA1-220ENST00000552286 KRTAP12-2P59991 146 aa9.11□□□□□ -0.95
MTA1-220ENST00000552286 KRTAP12-1P59990 96 aa9.09□□□□□ -0.95
MTA1-220ENST00000552286 LORP23490 312 aaPredicted RBP9.09□□□□□ -0.95
MTA1-220ENST00000552286 SPINT4Q6UDR6 99 aa9.05□□□□□ -0.96
MTA1-220ENST00000552286 ROMO1P60602 79 aa9.01□□□□□ -0.97
MTA1-220ENST00000552286 LINC01554Q52M75 96 aa8.99□□□□□ -0.97
MTA1-220ENST00000552286 LCE2AQ5TA79 106 aaPredicted RBP8.99□□□□□ -0.97
MTA1-220ENST00000552286 KRTAP9-8Q9BYQ0 159 aa8.9□□□□□ -0.98
MTA1-220ENST00000552286 MT2AP02795 61 aa8.88□□□□□ -0.99
MTA1-220ENST00000552286 KRTAP25-1Q3LHN0 102 aa8.84□□□□□ -0.99
MTA1-220ENST00000552286 CRIPTQ9P021 101 aa8.84□□□□□ -0.99
MTA1-220ENST00000552286 MT1FP04733 61 aa8.83□□□□□ -1
MTA1-220ENST00000552286 KRTAP10-10P60014 251 aa8.81□□□□□ -1
MTA1-220ENST00000552286 SPRR2GQ9BYE4 73 aa8.62□□□□□ -1.03
MTA1-220ENST00000552286 KRTAP19-1Q8IUB9 90 aa8.61□□□□□ -1.03
MTA1-220ENST00000552286 C10orf95Q9H7T3 257 aa8.61□□□□□ -1.03
MTA1-220ENST00000552286 CAMK2N1Q7Z7J9 78 aa8.58□□□□□ -1.04
MTA1-220ENST00000552286 KRTAP9-3Q9BYQ3 159 aa8.58□□□□□ -1.04
MTA1-220ENST00000552286 KRTAP19-8Q3LI54 63 aa8.4□□□□□ -1.06
MTA1-220ENST00000552286 PLAC4Q8WY50 150 aa8.39□□□□□ -1.07
MTA1-220ENST00000552286 LCE2BO14633 110 aa8.38□□□□□ -1.07
MTA1-220ENST00000552286 MT1BP07438 61 aa8.32□□□□□ -1.08
MTA1-220ENST00000552286 USH2AO75445 5202 aa8.28□□□□□ -1.08
MTA1-220ENST00000552286 H3BS24 57 aa8.22□□□□□ -1.09
MTA1-220ENST00000552286 TNP1P09430 55 aa8.22□□□□□ -1.09
MTA1-220ENST00000552286 LCE2DQ5TA82 110 aaPredicted RBP8.19□□□□□ -1.1
MTA1-220ENST00000552286 PP632Q6XCG6 107 aa8.17□□□□□ -1.1
MTA1-220ENST00000552286 FSIP2Q5CZC0 6907 aa8.09□□□□□ -1.11
MTA1-220ENST00000552286 KRTAP23-1A1A580 65 aa8.06□□□□□ -1.12
MTA1-220ENST00000552286 SSPOA2VEC9 5147 aa8.03□□□□□ -1.12
MTA1-220ENST00000552286 MT1XP80297 61 aa8.02□□□□□ -1.13
MTA1-220ENST00000552286 KRTAP10-5P60370 271 aa8.01□□□□□ -1.13
MTA1-220ENST00000552286 KRTAP9-2Q9BYQ4 174 aa7.99□□□□□ -1.13
MTA1-220ENST00000552286 PRO2289Q9P1D8 64 aa7.95□□□□□ -1.14
MTA1-220ENST00000552286 KRTAP15-1Q3LI76 137 aa7.94□□□□□ -1.14
MTA1-220ENST00000552286 KRTAP19-6Q3LI70 58 aa7.88□□□□□ -1.15
MTA1-220ENST00000552286 LCE3AQ5TA76 89 aa7.84□□□□□ -1.16
MTA1-220ENST00000552286 KRTAP10-7P60409 375 aaPredicted RBP7.74□□□□□ -1.17
MTA1-220ENST00000552286 KRTAP10-12P60413 245 aa7.71□□□□□ -1.18
MTA1-220ENST00000552286 FCGBPQ9Y6R7 5405 aaPredicted RBP7.71□□□□□ -1.18
MTA1-220ENST00000552286 CRCT1Q9UGL9 99 aa7.68□□□□□ -1.18
MTA1-220ENST00000552286 KRTAP8-1Q8IUC2 63 aa7.68□□□□□ -1.18
MTA1-220ENST00000552286 KMT2DO14686 5537 aa7.57□□□□□ -1.2
MTA1-220ENST00000552286 NDUFAF8A1L188 74 aa7.5□□□□□ -1.21
MTA1-220ENST00000552286 KRTAP12-3P60328 96 aa7.5□□□□□ -1.21
MTA1-220ENST00000552286 KRTAP4-8A0A0G2JLE6 195 aa7.44□□□□□ -1.22
MTA1-220ENST00000552286 KRTAP4-8Q9BYQ9 185 aa7.44□□□□□ -1.22
MTA1-220ENST00000552286 SPRR5A0A1B0GTR4 108 aa7.43□□□□□ -1.22
MTA1-220ENST00000552286 KRTAP9-6A0A140TA67 174 aa7.4□□□□□ -1.22
MTA1-220ENST00000552286 MACF1Q9UPN3 7388 aaKnown RBP7.4□□□□□ -1.22
MTA1-220ENST00000552286 LUZP6Q538Z0 58 aa7.35□□□□□ -1.23
MTA1-220ENST00000552286 KRTAP19-5Q3LI72 72 aa7.33□□□□□ -1.24
MTA1-220ENST00000552286 SYNE2Q8WXH0 6885 aaKnown RBP7.19□□□□□ -1.26
MTA1-220ENST00000552286 KRTAP19-7Q3SYF9 63 aa7.15□□□□□ -1.26
MTA1-220ENST00000552286 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.11□□□□□ -1.27
MTA1-220ENST00000552286 MT1EP04732 61 aa7.04□□□□□ -1.28
MTA1-220ENST00000552286 LCE3CQ5T5A8 94 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms