RNA–Protein interactions for RNA: ENST00000551352.1

SMARCD1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-210ENST00000551352 RPL37P61927 97 aaKnown RBP3.91□□□□□ -1.78
SMARCD1-210ENST00000551352 CRCT1Q9UGL9 99 aa3.91□□□□□ -1.78
SMARCD1-210ENST00000551352 MT1HP80294 61 aa3.89□□□□□ -1.79
SMARCD1-210ENST00000551352 ATP11AUNQ6ZP68 121 aa3.88□□□□□ -1.79
SMARCD1-210ENST00000551352 DMAC1Q96GE9 116 aa3.88□□□□□ -1.79
SMARCD1-210ENST00000551352 FSIP2Q5CZC0 6907 aa3.87□□□□□ -1.79
SMARCD1-210ENST00000551352 SMIM26A0A096LP01 95 aa3.87□□□□□ -1.79
SMARCD1-210ENST00000551352 SEC61BP60468 96 aaKnown RBP3.87□□□□□ -1.79
SMARCD1-210ENST00000551352 LCE3BQ5TA77 95 aa3.87□□□□□ -1.79
SMARCD1-210ENST00000551352 COA5Q86WW8 74 aa3.87□□□□□ -1.79
SMARCD1-210ENST00000551352 SPINK7P58062 85 aa3.86□□□□□ -1.79
SMARCD1-210ENST00000551352 ACYP2P14621 99 aa3.84□□□□□ -1.79
SMARCD1-210ENST00000551352 KRTAP10-6P60371 365 aaPredicted RBP3.83□□□□□ -1.8
SMARCD1-210ENST00000551352 C4orf26Q17RF5 130 aa3.83□□□□□ -1.8
SMARCD1-210ENST00000551352 A8MUN3 132 aa3.81□□□□□ -1.8
SMARCD1-210ENST00000551352 CHKB-CPT1BH3BT56 60 aa3.78□□□□□ -1.8
SMARCD1-210ENST00000551352 Q1T7F1 81 aa3.78□□□□□ -1.8
SMARCD1-210ENST00000551352 COX6B2Q6YFQ2 88 aa3.78□□□□□ -1.8
SMARCD1-210ENST00000551352 MPLKIPQ8TAP9 179 aa3.78□□□□□ -1.8
SMARCD1-210ENST00000551352 KRTAP3-1Q9BYR8 98 aa3.78□□□□□ -1.8
SMARCD1-210ENST00000551352 SSPOA2VEC9 5147 aa3.76□□□□□ -1.81
SMARCD1-210ENST00000551352 V9GYY9 64 aa3.76□□□□□ -1.81
SMARCD1-210ENST00000551352 USH2AO75445 5202 aa3.76□□□□□ -1.81
SMARCD1-210ENST00000551352 KRTAP4-8A0A0G2JLE6 195 aa3.75□□□□□ -1.81
SMARCD1-210ENST00000551352 KRTAP4-12Q9BQ66 201 aa3.75□□□□□ -1.81
SMARCD1-210ENST00000551352 KRTAP9-9Q9BYP9 154 aa3.74□□□□□ -1.81
SMARCD1-210ENST00000551352 KRTAP9-4Q9BYQ2 154 aa3.74□□□□□ -1.81
SMARCD1-210ENST00000551352 LINC01558Q9Y6Z2 57 aa3.72□□□□□ -1.81
SMARCD1-210ENST00000551352 PSPHP1O15172 72 aa3.7□□□□□ -1.82
SMARCD1-210ENST00000551352 SPTSSBQ8NFR3 76 aa3.7□□□□□ -1.82
SMARCD1-210ENST00000551352 PRR15LQ9BU68 103 aa3.7□□□□□ -1.82
SMARCD1-210ENST00000551352 M0R2T5 61 aa3.68□□□□□ -1.82
SMARCD1-210ENST00000551352 Q5VV11 94 aa3.68□□□□□ -1.82
SMARCD1-210ENST00000551352 KRTAP9-8Q9BYQ0 159 aa3.68□□□□□ -1.82
SMARCD1-210ENST00000551352 RBM12B-AS1Q9P1G2 102 aa3.68□□□□□ -1.82
SMARCD1-210ENST00000551352 H1FX-AS1Q4G0G2 97 aa3.67□□□□□ -1.82
SMARCD1-210ENST00000551352 KRTAP9-7A8MTY7 169 aa3.66□□□□□ -1.82
SMARCD1-210ENST00000551352 S4R3F8 94 aa3.66□□□□□ -1.82
SMARCD1-210ENST00000551352 LCA10Q71F78 164 aa3.65□□□□□ -1.83
SMARCD1-210ENST00000551352 FCGBPQ9Y6R7 5405 aaPredicted RBP3.65□□□□□ -1.83
SMARCD1-210ENST00000551352 A0A1B0GU69 56 aa3.64□□□□□ -1.83
SMARCD1-210ENST00000551352 KRTAP4-7Q9BYR0 210 aa3.64□□□□□ -1.83
SMARCD1-210ENST00000551352 MT2AP02795 61 aa3.61□□□□□ -1.83
SMARCD1-210ENST00000551352 SEC61GP60059 68 aa3.6□□□□□ -1.83
SMARCD1-210ENST00000551352 KRTAP19-1Q8IUB9 90 aa3.6□□□□□ -1.83
SMARCD1-210ENST00000551352 A6NED7 52 aa3.59□□□□□ -1.83
SMARCD1-210ENST00000551352 MT1FP04733 61 aa3.59□□□□□ -1.83
SMARCD1-210ENST00000551352 LCE1DQ5T752 114 aa3.59□□□□□ -1.83
SMARCD1-210ENST00000551352 BRK1Q8WUW1 75 aa3.59□□□□□ -1.83
SMARCD1-210ENST00000551352 KRTAP9-3Q9BYQ3 159 aa3.57□□□□□ -1.84
SMARCD1-210ENST00000551352 CSAG1Q6PB30 78 aa3.56□□□□□ -1.84
SMARCD1-210ENST00000551352 UQCR11O14957 56 aa3.54□□□□□ -1.84
SMARCD1-210ENST00000551352 CDC42SE1Q9NRR8 79 aa3.54□□□□□ -1.84
SMARCD1-210ENST00000551352 A8MU10 97 aa3.53□□□□□ -1.84
SMARCD1-210ENST00000551352 PRO0628Q9UI54 55 aa3.53□□□□□ -1.84
SMARCD1-210ENST00000551352 A0A1B0GU33 70 aa3.52□□□□□ -1.85
SMARCD1-210ENST00000551352 MIR22HGQ0VDD5 57 aa3.51□□□□□ -1.85
SMARCD1-210ENST00000551352 SPATA8Q6RVD6 105 aa3.51□□□□□ -1.85
SMARCD1-210ENST00000551352 H0YAA0 97 aa3.5□□□□□ -1.85
SMARCD1-210ENST00000551352 ADM2Q7Z4H4 148 aa3.5□□□□□ -1.85
SMARCD1-210ENST00000551352 KRTAP4-9Q9BYQ8 210 aa3.5□□□□□ -1.85
SMARCD1-210ENST00000551352 P0C880 135 aa3.49□□□□□ -1.85
SMARCD1-210ENST00000551352 KRTAP10-10P60014 251 aa3.47□□□□□ -1.85
SMARCD1-210ENST00000551352 MACF1Q9UPN3 7388 aaKnown RBP3.47□□□□□ -1.85
SMARCD1-210ENST00000551352 KRTAP19-6Q3LI70 58 aa3.46□□□□□ -1.86
SMARCD1-210ENST00000551352 KRTAP4-2Q9BYR5 136 aa3.46□□□□□ -1.86
SMARCD1-210ENST00000551352 KRTAP13-4Q3LI77 160 aa3.44□□□□□ -1.86
SMARCD1-210ENST00000551352 SYNE2Q8WXH0 6885 aaKnown RBP3.42□□□□□ -1.86
SMARCD1-210ENST00000551352 M0QZ58 72 aa3.41□□□□□ -1.86
SMARCD1-210ENST00000551352 PMAIP1Q13794 54 aa3.39□□□□□ -1.87
SMARCD1-210ENST00000551352 A6NN06 94 aa3.38□□□□□ -1.87
SMARCD1-210ENST00000551352 A0A0D9SG42 100 aa3.37□□□□□ -1.87
SMARCD1-210ENST00000551352 KRTAP6-3Q3LI67 103 aa3.36□□□□□ -1.87
SMARCD1-210ENST00000551352 R4GN34 69 aa3.36□□□□□ -1.87
SMARCD1-210ENST00000551352 SVIPQ8NHG7 77 aa3.35□□□□□ -1.87
SMARCD1-210ENST00000551352 KRTAP4-11Q9BYQ6 195 aa3.34□□□□□ -1.87
SMARCD1-210ENST00000551352 K7ERS5 55 aa3.33□□□□□ -1.88
SMARCD1-210ENST00000551352 CRIPTQ9P021 101 aa3.33□□□□□ -1.88
SMARCD1-210ENST00000551352 KRTAP12-1P59990 96 aa3.31□□□□□ -1.88
SMARCD1-210ENST00000551352 KRTAP12-2P59991 146 aa3.3□□□□□ -1.88
SMARCD1-210ENST00000551352 LINC01554Q52M75 96 aa3.3□□□□□ -1.88
SMARCD1-210ENST00000551352 KRTAP5-3Q6L8H2 238 aa3.28□□□□□ -1.88
SMARCD1-210ENST00000551352 SPINT4Q6UDR6 99 aa3.28□□□□□ -1.88
SMARCD1-210ENST00000551352 MUC12Q9UKN1 5478 aa3.28□□□□□ -1.88
SMARCD1-210ENST00000551352 MT1BP07438 61 aa3.27□□□□□ -1.89
SMARCD1-210ENST00000551352 KTN1-AS1Q86SY8 53 aa3.27□□□□□ -1.89
SMARCD1-210ENST00000551352 NEBP20929 6669 aa3.26□□□□□ -1.89
SMARCD1-210ENST00000551352 SPRR2GQ9BYE4 73 aa3.25□□□□□ -1.89
SMARCD1-210ENST00000551352 ROMO1P60602 79 aa3.22□□□□□ -1.89
SMARCD1-210ENST00000551352 KRTAP19-8Q3LI54 63 aa3.2□□□□□ -1.9
SMARCD1-210ENST00000551352 KRTAP5-9P26371 169 aa3.18□□□□□ -1.9
SMARCD1-210ENST00000551352 KRTAP10-5P60370 271 aa3.18□□□□□ -1.9
SMARCD1-210ENST00000551352 PRAC1Q96KF2 57 aa3.18□□□□□ -1.9
SMARCD1-210ENST00000551352 KMT2DO14686 5537 aa3.17□□□□□ -1.9
SMARCD1-210ENST00000551352 LCE4AQ5TA78 99 aa3.17□□□□□ -1.9
SMARCD1-210ENST00000551352 MDN1Q9NU22 5596 aa3.16□□□□□ -1.9
SMARCD1-210ENST00000551352 KRTAP20-1Q3LI63 56 aa3.16□□□□□ -1.9
SMARCD1-210ENST00000551352 CAMK2N1Q7Z7J9 78 aa3.16□□□□□ -1.9
SMARCD1-210ENST00000551352 PLAC4Q8WY50 150 aa3.14□□□□□ -1.91
SMARCD1-210ENST00000551352 C10orf95Q9H7T3 257 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms