RNA–Protein interactions for RNA: ENST00000550483.5

CACNB3-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-217ENST00000550483 FSIP2Q5CZC0 6907 aa6.48□□□□□ -1.37
CACNB3-217ENST00000550483 SPTSSBQ8NFR3 76 aa6.48□□□□□ -1.37
CACNB3-217ENST00000550483 RBM12B-AS1Q9P1G2 102 aa6.48□□□□□ -1.37
CACNB3-217ENST00000550483 MPLKIPQ8TAP9 179 aa6.43□□□□□ -1.38
CACNB3-217ENST00000550483 Q1T7F1 81 aa6.42□□□□□ -1.38
CACNB3-217ENST00000550483 KRTAP3-1Q9BYR8 98 aa6.41□□□□□ -1.38
CACNB3-217ENST00000550483 H1FX-AS1Q4G0G2 97 aa6.38□□□□□ -1.39
CACNB3-217ENST00000550483 CRCT1Q9UGL9 99 aa6.37□□□□□ -1.39
CACNB3-217ENST00000550483 LINC01558Q9Y6Z2 57 aa6.36□□□□□ -1.39
CACNB3-217ENST00000550483 S4R3F8 94 aa6.33□□□□□ -1.4
CACNB3-217ENST00000550483 MUC17Q685J3 4493 aa6.33□□□□□ -1.4
CACNB3-217ENST00000550483 PRR15LQ9BU68 103 aa6.32□□□□□ -1.4
CACNB3-217ENST00000550483 LCE2DQ5TA82 110 aaPredicted RBP6.29□□□□□ -1.4
CACNB3-217ENST00000550483 SEC61GP60059 68 aa6.27□□□□□ -1.41
CACNB3-217ENST00000550483 KRTAP4-1Q9BYQ7 146 aa6.26□□□□□ -1.41
CACNB3-217ENST00000550483 A0A1B0GU69 56 aa6.25□□□□□ -1.41
CACNB3-217ENST00000550483 LCA10Q71F78 164 aa6.25□□□□□ -1.41
CACNB3-217ENST00000550483 PSPHP1O15172 72 aa6.21□□□□□ -1.42
CACNB3-217ENST00000550483 CSAG1Q6PB30 78 aa6.21□□□□□ -1.42
CACNB3-217ENST00000550483 KRTAP3-3Q9BYR6 98 aa6.2□□□□□ -1.42
CACNB3-217ENST00000550483 Q5VV11 94 aa6.18□□□□□ -1.42
CACNB3-217ENST00000550483 KRTAP19-2Q3LHN2 52 aa6.15□□□□□ -1.42
CACNB3-217ENST00000550483 H0YAA0 97 aa6.13□□□□□ -1.43
CACNB3-217ENST00000550483 A6NED7 52 aa6.09□□□□□ -1.43
CACNB3-217ENST00000550483 UQCR11O14957 56 aa6.09□□□□□ -1.43
CACNB3-217ENST00000550483 A0A1B0GU33 70 aa6.04□□□□□ -1.44
CACNB3-217ENST00000550483 CDC42SE1Q9NRR8 79 aa6.02□□□□□ -1.45
CACNB3-217ENST00000550483 KRTAP9-7A8MTY7 169 aa6.01□□□□□ -1.45
CACNB3-217ENST00000550483 BRK1Q8WUW1 75 aa6.01□□□□□ -1.45
CACNB3-217ENST00000550483 LCE2CQ5TA81 110 aa6□□□□□ -1.45
CACNB3-217ENST00000550483 ADM2Q7Z4H4 148 aa6□□□□□ -1.45
CACNB3-217ENST00000550483 KRTAP10-6P60371 365 aaPredicted RBP5.99□□□□□ -1.45
CACNB3-217ENST00000550483 MIR22HGQ0VDD5 57 aa5.99□□□□□ -1.45
CACNB3-217ENST00000550483 KRTAP3-2Q9BYR7 98 aa5.99□□□□□ -1.45
CACNB3-217ENST00000550483 SPATA8Q6RVD6 105 aa5.98□□□□□ -1.45
CACNB3-217ENST00000550483 PRO0628Q9UI54 55 aa5.95□□□□□ -1.46
CACNB3-217ENST00000550483 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.94□□□□□ -1.46
CACNB3-217ENST00000550483 M0QZ58 72 aa5.94□□□□□ -1.46
CACNB3-217ENST00000550483 P0C880 135 aa5.92□□□□□ -1.46
CACNB3-217ENST00000550483 MT1HP80294 61 aa5.91□□□□□ -1.46
CACNB3-217ENST00000550483 M0R2T5 61 aa5.9□□□□□ -1.46
CACNB3-217ENST00000550483 FLGP20930 4061 aaPredicted RBP5.89□□□□□ -1.47
CACNB3-217ENST00000550483 CRIPTQ9P021 101 aa5.89□□□□□ -1.47
CACNB3-217ENST00000550483 LORP23490 312 aaPredicted RBP5.87□□□□□ -1.47
CACNB3-217ENST00000550483 R4GN34 69 aa5.84□□□□□ -1.47
CACNB3-217ENST00000550483 SSPOA2VEC9 5147 aa5.84□□□□□ -1.47
CACNB3-217ENST00000550483 K7ERS5 55 aa5.82□□□□□ -1.48
CACNB3-217ENST00000550483 USH2AO75445 5202 aa5.8□□□□□ -1.48
CACNB3-217ENST00000550483 KRTAP13-4Q3LI77 160 aa5.78□□□□□ -1.48
CACNB3-217ENST00000550483 FCGBPQ9Y6R7 5405 aaPredicted RBP5.77□□□□□ -1.49
CACNB3-217ENST00000550483 A8MU10 97 aa5.77□□□□□ -1.49
CACNB3-217ENST00000550483 A6NN06 94 aa5.72□□□□□ -1.49
CACNB3-217ENST00000550483 SYNE2Q8WXH0 6885 aaKnown RBP5.71□□□□□ -1.49
CACNB3-217ENST00000550483 A0A0D9SG42 100 aa5.71□□□□□ -1.5
CACNB3-217ENST00000550483 PMAIP1Q13794 54 aa5.71□□□□□ -1.5
CACNB3-217ENST00000550483 MT2AP02795 61 aa5.68□□□□□ -1.5
CACNB3-217ENST00000550483 KRTAP9-8Q9BYQ0 159 aa5.68□□□□□ -1.5
CACNB3-217ENST00000550483 KRTAP10-10P60014 251 aa5.66□□□□□ -1.5
CACNB3-217ENST00000550483 SPRR2GQ9BYE4 73 aa5.65□□□□□ -1.5
CACNB3-217ENST00000550483 LINC01554Q52M75 96 aa5.64□□□□□ -1.51
CACNB3-217ENST00000550483 MACF1Q9UPN3 7388 aaKnown RBP5.63□□□□□ -1.51
CACNB3-217ENST00000550483 MT1FP04733 61 aa5.63□□□□□ -1.51
CACNB3-217ENST00000550483 KRTAP12-1P59990 96 aa5.63□□□□□ -1.51
CACNB3-217ENST00000550483 SPINT4Q6UDR6 99 aa5.62□□□□□ -1.51
CACNB3-217ENST00000550483 KRTAP12-2P59991 146 aa5.58□□□□□ -1.52
CACNB3-217ENST00000550483 KRTAP19-1Q8IUB9 90 aa5.58□□□□□ -1.52
CACNB3-217ENST00000550483 H3BS24 57 aa5.56□□□□□ -1.52
CACNB3-217ENST00000550483 KTN1-AS1Q86SY8 53 aa5.51□□□□□ -1.53
CACNB3-217ENST00000550483 PLAC4Q8WY50 150 aa5.51□□□□□ -1.53
CACNB3-217ENST00000550483 KRTAP19-8Q3LI54 63 aa5.5□□□□□ -1.53
CACNB3-217ENST00000550483 ROMO1P60602 79 aa5.49□□□□□ -1.53
CACNB3-217ENST00000550483 KRTAP9-3Q9BYQ3 159 aa5.49□□□□□ -1.53
CACNB3-217ENST00000550483 CAMK2N1Q7Z7J9 78 aa5.48□□□□□ -1.53
CACNB3-217ENST00000550483 LCE2BO14633 110 aa5.47□□□□□ -1.53
CACNB3-217ENST00000550483 NEBP20929 6669 aa5.42□□□□□ -1.54
CACNB3-217ENST00000550483 KRTAP6-3Q3LI67 103 aa5.37□□□□□ -1.55
CACNB3-217ENST00000550483 MT1BP07438 61 aa5.34□□□□□ -1.55
CACNB3-217ENST00000550483 A0A0A0MQY5 61 aa5.32□□□□□ -1.56
CACNB3-217ENST00000550483 KRTAP25-1Q3LHN0 102 aa5.3□□□□□ -1.56
CACNB3-217ENST00000550483 C10orf95Q9H7T3 257 aa5.3□□□□□ -1.56
CACNB3-217ENST00000550483 KRTAP19-6Q3LI70 58 aa5.29□□□□□ -1.56
CACNB3-217ENST00000550483 PRO2289Q9P1D8 64 aa5.28□□□□□ -1.56
CACNB3-217ENST00000550483 MUC12Q9UKN1 5478 aa5.25□□□□□ -1.57
CACNB3-217ENST00000550483 TNP1P09430 55 aa5.25□□□□□ -1.57
CACNB3-217ENST00000550483 PRAC1Q96KF2 57 aa5.23□□□□□ -1.57
CACNB3-217ENST00000550483 KRTAP20-1Q3LI63 56 aa5.22□□□□□ -1.57
CACNB3-217ENST00000550483 KRTAP23-1A1A580 65 aa5.18□□□□□ -1.58
CACNB3-217ENST00000550483 MT1XP80297 61 aa5.18□□□□□ -1.58
CACNB3-217ENST00000550483 PP632Q6XCG6 107 aa5.18□□□□□ -1.58
CACNB3-217ENST00000550483 KRTAP10-5P60370 271 aa5.17□□□□□ -1.58
CACNB3-217ENST00000550483 MDN1Q9NU22 5596 aa5.08□□□□□ -1.6
CACNB3-217ENST00000550483 KMT2DO14686 5537 aa5.03□□□□□ -1.6
CACNB3-217ENST00000550483 KRTAP10-12P60413 245 aa4.99□□□□□ -1.61
CACNB3-217ENST00000550483 KRTAP2-3P0C7H8 128 aa4.95□□□□□ -1.62
CACNB3-217ENST00000550483 KRTAP2-4Q9BYR9 128 aa4.95□□□□□ -1.62
CACNB3-217ENST00000550483 KRTAP10-7P60409 375 aaPredicted RBP4.94□□□□□ -1.62
CACNB3-217ENST00000550483 LCE3AQ5TA76 89 aa4.91□□□□□ -1.62
CACNB3-217ENST00000550483 KRTAP5-9P26371 169 aa4.89□□□□□ -1.63
CACNB3-217ENST00000550483 KRTAP8-1Q8IUC2 63 aa4.89□□□□□ -1.63
CACNB3-217ENST00000550483 GPR98Q8WXG9 6306 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms