RNA–Protein interactions for RNA: ENST00000550375.1

BRF1-217, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,362 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-217ENST00000550375 C20orf197Q8N268 126 aa8.17□□□□□ -1.1
BRF1-217ENST00000550375 MT1FP04733 61 aa8.16□□□□□ -1.1
BRF1-217ENST00000550375 CSAG1Q6PB30 78 aa8.16□□□□□ -1.1
BRF1-217ENST00000550375 KRTAP10-10P60014 251 aa8.15□□□□□ -1.1
BRF1-217ENST00000550375 KRTAP3-3Q9BYR6 98 aa8.13□□□□□ -1.11
BRF1-217ENST00000550375 DMAC1Q96GE9 116 aa8.11□□□□□ -1.11
BRF1-217ENST00000550375 COX7CP15954 63 aa8.1□□□□□ -1.11
BRF1-217ENST00000550375 NDUFC1O43677 76 aa8.08□□□□□ -1.12
BRF1-217ENST00000550375 ANAPC13Q9BS18 74 aa8.04□□□□□ -1.12
BRF1-217ENST00000550375 KRTAP9-3Q9BYQ3 159 aa8.01□□□□□ -1.13
BRF1-217ENST00000550375 ACYP2P14621 99 aa8□□□□□ -1.13
BRF1-217ENST00000550375 SPANXA2-OT1Q8N9U9 137 aa7.97□□□□□ -1.13
BRF1-217ENST00000550375 CYSTM1Q9H1C7 97 aa7.93□□□□□ -1.14
BRF1-217ENST00000550375 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.92□□□□□ -1.14
BRF1-217ENST00000550375 KRTAP9-7A8MTY7 169 aa7.9□□□□□ -1.14
BRF1-217ENST00000550375 LCE2BO14633 110 aa7.9□□□□□ -1.14
BRF1-217ENST00000550375 USH2AO75445 5202 aa7.89□□□□□ -1.15
BRF1-217ENST00000550375 CHKB-CPT1BH3BT56 60 aa7.88□□□□□ -1.15
BRF1-217ENST00000550375 CCDC179H3BU77 68 aa7.88□□□□□ -1.15
BRF1-217ENST00000550375 SSPOA2VEC9 5147 aa7.88□□□□□ -1.15
BRF1-217ENST00000550375 H7BZZ5 65 aa7.87□□□□□ -1.15
BRF1-217ENST00000550375 H0YAA0 97 aa7.85□□□□□ -1.15
BRF1-217ENST00000550375 ADM2Q7Z4H4 148 aa7.85□□□□□ -1.15
BRF1-217ENST00000550375 SPTSSBQ8NFR3 76 aa7.82□□□□□ -1.16
BRF1-217ENST00000550375 KRTAP19-1Q8IUB9 90 aa7.78□□□□□ -1.16
BRF1-217ENST00000550375 COA5Q86WW8 74 aa7.77□□□□□ -1.17
BRF1-217ENST00000550375 FCGBPQ9Y6R7 5405 aaPredicted RBP7.75□□□□□ -1.17
BRF1-217ENST00000550375 CRIPTQ9P021 101 aa7.74□□□□□ -1.17
BRF1-217ENST00000550375 SPRR2GQ9BYE4 73 aa7.73□□□□□ -1.17
BRF1-217ENST00000550375 P0C880 135 aa7.72□□□□□ -1.17
BRF1-217ENST00000550375 KRTAP3-2Q9BYR7 98 aa7.71□□□□□ -1.18
BRF1-217ENST00000550375 KRTAP19-8Q3LI54 63 aa7.61□□□□□ -1.19
BRF1-217ENST00000550375 Q5VV11 94 aa7.61□□□□□ -1.19
BRF1-217ENST00000550375 R4GN34 69 aa7.6□□□□□ -1.19
BRF1-217ENST00000550375 ATP5EP56381 51 aaPredicted RBP7.59□□□□□ -1.19
BRF1-217ENST00000550375 MT1BP07438 61 aa7.59□□□□□ -1.2
BRF1-217ENST00000550375 M0QZ58 72 aa7.58□□□□□ -1.2
BRF1-217ENST00000550375 TMEM258P61165 79 aa7.56□□□□□ -1.2
BRF1-217ENST00000550375 KRTAP19-6Q3LI70 58 aa7.53□□□□□ -1.2
BRF1-217ENST00000550375 SYNE2Q8WXH0 6885 aaKnown RBP7.48□□□□□ -1.21
BRF1-217ENST00000550375 SEC61GP60059 68 aa7.48□□□□□ -1.21
BRF1-217ENST00000550375 MACF1Q9UPN3 7388 aaKnown RBP7.48□□□□□ -1.21
BRF1-217ENST00000550375 LINC01554Q52M75 96 aa7.47□□□□□ -1.21
BRF1-217ENST00000550375 SERP1Q9Y6X1 66 aa7.46□□□□□ -1.22
BRF1-217ENST00000550375 PCP4P48539 62 aa7.38□□□□□ -1.23
BRF1-217ENST00000550375 PLAC4Q8WY50 150 aa7.38□□□□□ -1.23
BRF1-217ENST00000550375 KRTAP13-4Q3LI77 160 aa7.37□□□□□ -1.23
BRF1-217ENST00000550375 A0A1B0GU69 56 aa7.36□□□□□ -1.23
BRF1-217ENST00000550375 A6NN06 94 aa7.36□□□□□ -1.23
BRF1-217ENST00000550375 A0A1B0GU33 70 aa7.33□□□□□ -1.24
BRF1-217ENST00000550375 KRTAP10-5P60370 271 aa7.33□□□□□ -1.24
BRF1-217ENST00000550375 KRTAP6-3Q3LI67 103 aa7.27□□□□□ -1.25
BRF1-217ENST00000550375 SPATA8Q6RVD6 105 aa7.27□□□□□ -1.25
BRF1-217ENST00000550375 LINC01558Q9Y6Z2 57 aa7.26□□□□□ -1.25
BRF1-217ENST00000550375 PRR15LQ9BU68 103 aa7.24□□□□□ -1.25
BRF1-217ENST00000550375 A0A0D9SG42 100 aa7.22□□□□□ -1.25
BRF1-217ENST00000550375 MT1XP80297 61 aa7.21□□□□□ -1.25
BRF1-217ENST00000550375 PRO2289Q9P1D8 64 aa7.2□□□□□ -1.26
BRF1-217ENST00000550375 SMIM26A0A096LP01 95 aa7.1□□□□□ -1.27
BRF1-217ENST00000550375 A8MU10 97 aa7.08□□□□□ -1.28
BRF1-217ENST00000550375 SPINT4Q6UDR6 99 aa7.08□□□□□ -1.28
BRF1-217ENST00000550375 CAMK2N1Q7Z7J9 78 aa7.07□□□□□ -1.28
BRF1-217ENST00000550375 V9GYY9 64 aa7.07□□□□□ -1.28
BRF1-217ENST00000550375 Q1T7F1 81 aa7.05□□□□□ -1.28
BRF1-217ENST00000550375 KRTAP12-1P59990 96 aa7.04□□□□□ -1.28
BRF1-217ENST00000550375 PSPHP1O15172 72 aa7.02□□□□□ -1.29
BRF1-217ENST00000550375 RPS28P62857 69 aaKnown RBP7.02□□□□□ -1.29
BRF1-217ENST00000550375 NEBP20929 6669 aa7.02□□□□□ -1.29
BRF1-217ENST00000550375 UQCR11O14957 56 aa7.01□□□□□ -1.29
BRF1-217ENST00000550375 KRTAP12-2P59991 146 aa7.01□□□□□ -1.29
BRF1-217ENST00000550375 MUC12Q9UKN1 5478 aa6.98□□□□□ -1.29
BRF1-217ENST00000550375 KRTAP10-7P60409 375 aaPredicted RBP6.91□□□□□ -1.3
BRF1-217ENST00000550375 MIR22HGQ0VDD5 57 aa6.91□□□□□ -1.3
BRF1-217ENST00000550375 KRTAP20-1Q3LI63 56 aa6.88□□□□□ -1.31
BRF1-217ENST00000550375 KMT2DO14686 5537 aa6.88□□□□□ -1.31
BRF1-217ENST00000550375 KRTAP10-12P60413 245 aa6.83□□□□□ -1.32
BRF1-217ENST00000550375 KRTAP4-8A0A0G2JLE6 195 aa6.81□□□□□ -1.32
BRF1-217ENST00000550375 KRTAP4-8Q9BYQ9 185 aa6.81□□□□□ -1.32
BRF1-217ENST00000550375 A6NED7 52 aa6.8□□□□□ -1.32
BRF1-217ENST00000550375 KRTAP5-9P26371 169 aa6.8□□□□□ -1.32
BRF1-217ENST00000550375 KRTAP8-1Q8IUC2 63 aa6.78□□□□□ -1.32
BRF1-217ENST00000550375 MDN1Q9NU22 5596 aa6.74□□□□□ -1.33
BRF1-217ENST00000550375 C10orf95Q9H7T3 257 aa6.71□□□□□ -1.33
BRF1-217ENST00000550375 K7ERS5 55 aa6.69□□□□□ -1.34
BRF1-217ENST00000550375 SPRR2FQ96RM1 72 aa6.68□□□□□ -1.34
BRF1-217ENST00000550375 KRTAP2-3P0C7H8 128 aa6.61□□□□□ -1.35
BRF1-217ENST00000550375 KRTAP2-4Q9BYR9 128 aa6.61□□□□□ -1.35
BRF1-217ENST00000550375 TNP1P09430 55 aa6.6□□□□□ -1.35
BRF1-217ENST00000550375 CDC42SE1Q9NRR8 79 aa6.55□□□□□ -1.36
BRF1-217ENST00000550375 SPRR2EP22531 72 aa6.53□□□□□ -1.36
BRF1-217ENST00000550375 SPRR2BP35325 72 aa6.53□□□□□ -1.36
BRF1-217ENST00000550375 SPRR2AP35326 72 aa6.53□□□□□ -1.36
BRF1-217ENST00000550375 LCE3AQ5TA76 89 aa6.45□□□□□ -1.38
BRF1-217ENST00000550375 LCE1AQ5T7P2 110 aa6.44□□□□□ -1.38
BRF1-217ENST00000550375 KRTAP19-7Q3SYF9 63 aa6.43□□□□□ -1.38
BRF1-217ENST00000550375 KRTAP25-1Q3LHN0 102 aa6.41□□□□□ -1.38
BRF1-217ENST00000550375 KRTAP19-5Q3LI72 72 aa6.41□□□□□ -1.38
BRF1-217ENST00000550375 KRTAP2-2Q9BYT5 123 aa6.39□□□□□ -1.39
BRF1-217ENST00000550375 KRTAP2-1Q9BYU5 128 aa6.39□□□□□ -1.39
BRF1-217ENST00000550375 MT1EP04732 61 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms