RNA–Protein interactions for RNA: ENST00000550228.5

GPN3-207, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 353 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-207ENST00000550228 LORP23490 312 aaPredicted RBP4□□□□□ -1.77
GPN3-207ENST00000550228 ACYP2P14621 99 aa3.99□□□□□ -1.77
GPN3-207ENST00000550228 MT1HP80294 61 aa3.99□□□□□ -1.77
GPN3-207ENST00000550228 FAT4Q6V0I7 4981 aa3.99□□□□□ -1.77
GPN3-207ENST00000550228 M0R2T5 61 aa3.98□□□□□ -1.77
GPN3-207ENST00000550228 TMEM258P61165 79 aa3.98□□□□□ -1.77
GPN3-207ENST00000550228 FLGP20930 4061 aaPredicted RBP3.98□□□□□ -1.77
GPN3-207ENST00000550228 ATP5EP56381 51 aaPredicted RBP3.97□□□□□ -1.77
GPN3-207ENST00000550228 LCA10Q71F78 164 aa3.97□□□□□ -1.77
GPN3-207ENST00000550228 CHKB-CPT1BH3BT56 60 aa3.96□□□□□ -1.78
GPN3-207ENST00000550228 COA5Q86WW8 74 aa3.95□□□□□ -1.78
GPN3-207ENST00000550228 CSAG1Q6PB30 78 aa3.92□□□□□ -1.78
GPN3-207ENST00000550228 LOC100996750A0A140TA64 210 aa3.89□□□□□ -1.79
GPN3-207ENST00000550228 SPTSSBQ8NFR3 76 aa3.89□□□□□ -1.79
GPN3-207ENST00000550228 KRTAP4-6Q9BYQ5 205 aa3.89□□□□□ -1.79
GPN3-207ENST00000550228 KRTAP10-6P60371 365 aaPredicted RBP3.88□□□□□ -1.79
GPN3-207ENST00000550228 SERP1Q9Y6X1 66 aa3.86□□□□□ -1.79
GPN3-207ENST00000550228 MT2AP02795 61 aa3.81□□□□□ -1.8
GPN3-207ENST00000550228 ADM2Q7Z4H4 148 aa3.81□□□□□ -1.8
GPN3-207ENST00000550228 KRTAP9-8Q9BYQ0 159 aa3.81□□□□□ -1.8
GPN3-207ENST00000550228 MT1FP04733 61 aa3.79□□□□□ -1.8
GPN3-207ENST00000550228 KRTAP10-10P60014 251 aa3.79□□□□□ -1.8
GPN3-207ENST00000550228 H0YAA0 97 aa3.78□□□□□ -1.8
GPN3-207ENST00000550228 P0C880 135 aa3.76□□□□□ -1.81
GPN3-207ENST00000550228 SEC61GP60059 68 aa3.75□□□□□ -1.81
GPN3-207ENST00000550228 RPS28P62857 69 aaKnown RBP3.75□□□□□ -1.81
GPN3-207ENST00000550228 SMIM26A0A096LP01 95 aa3.73□□□□□ -1.81
GPN3-207ENST00000550228 A0A1B0GU69 56 aa3.73□□□□□ -1.81
GPN3-207ENST00000550228 LINC01558Q9Y6Z2 57 aa3.73□□□□□ -1.81
GPN3-207ENST00000550228 PRR15LQ9BU68 103 aa3.71□□□□□ -1.82
GPN3-207ENST00000550228 V9GYY9 64 aa3.69□□□□□ -1.82
GPN3-207ENST00000550228 M0QZ58 72 aa3.68□□□□□ -1.82
GPN3-207ENST00000550228 Q1T7F1 81 aa3.68□□□□□ -1.82
GPN3-207ENST00000550228 KRTAP9-3Q9BYQ3 159 aa3.68□□□□□ -1.82
GPN3-207ENST00000550228 CRIPTQ9P021 101 aa3.68□□□□□ -1.82
GPN3-207ENST00000550228 R4GN34 69 aa3.68□□□□□ -1.82
GPN3-207ENST00000550228 PSPHP1O15172 72 aa3.67□□□□□ -1.82
GPN3-207ENST00000550228 A0A1B0GU33 70 aa3.66□□□□□ -1.82
GPN3-207ENST00000550228 KRTAP19-1Q8IUB9 90 aa3.65□□□□□ -1.83
GPN3-207ENST00000550228 KRTAP13-4Q3LI77 160 aa3.64□□□□□ -1.83
GPN3-207ENST00000550228 LINC01554Q52M75 96 aa3.63□□□□□ -1.83
GPN3-207ENST00000550228 SPATA8Q6RVD6 105 aa3.63□□□□□ -1.83
GPN3-207ENST00000550228 SPRR2GQ9BYE4 73 aa3.63□□□□□ -1.83
GPN3-207ENST00000550228 Q5VV11 94 aa3.62□□□□□ -1.83
GPN3-207ENST00000550228 A0A0D9SG42 100 aa3.59□□□□□ -1.83
GPN3-207ENST00000550228 UQCR11O14957 56 aa3.58□□□□□ -1.84
GPN3-207ENST00000550228 KRTAP9-2Q9BYQ4 174 aa3.58□□□□□ -1.84
GPN3-207ENST00000550228 KRTAP19-8Q3LI54 63 aa3.57□□□□□ -1.84
GPN3-207ENST00000550228 A6NED7 52 aa3.56□□□□□ -1.84
GPN3-207ENST00000550228 A8MU10 97 aa3.56□□□□□ -1.84
GPN3-207ENST00000550228 MT1BP07438 61 aa3.55□□□□□ -1.84
GPN3-207ENST00000550228 KRTAP4-8Q9BYQ9 185 aa3.55□□□□□ -1.84
GPN3-207ENST00000550228 MIR22HGQ0VDD5 57 aa3.54□□□□□ -1.84
GPN3-207ENST00000550228 USH2AO75445 5202 aa3.53□□□□□ -1.84
GPN3-207ENST00000550228 PLAC4Q8WY50 150 aa3.52□□□□□ -1.85
GPN3-207ENST00000550228 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.51□□□□□ -1.85
GPN3-207ENST00000550228 SPINT4Q6UDR6 99 aa3.51□□□□□ -1.85
GPN3-207ENST00000550228 KRTAP9-6A0A140TA67 174 aa3.49□□□□□ -1.85
GPN3-207ENST00000550228 A6NN06 94 aa3.49□□□□□ -1.85
GPN3-207ENST00000550228 KRTAP12-1P59990 96 aa3.48□□□□□ -1.85
GPN3-207ENST00000550228 KRTAP12-2P59991 146 aa3.47□□□□□ -1.85
GPN3-207ENST00000550228 CDC42SE1Q9NRR8 79 aa3.45□□□□□ -1.86
GPN3-207ENST00000550228 CAMK2N1Q7Z7J9 78 aa3.44□□□□□ -1.86
GPN3-207ENST00000550228 CRCT1Q9UGL9 99 aa3.43□□□□□ -1.86
GPN3-207ENST00000550228 KRTAP19-6Q3LI70 58 aa3.42□□□□□ -1.86
GPN3-207ENST00000550228 SSPOA2VEC9 5147 aa3.42□□□□□ -1.86
GPN3-207ENST00000550228 K7ERS5 55 aa3.41□□□□□ -1.86
GPN3-207ENST00000550228 BRK1Q8WUW1 75 aa3.41□□□□□ -1.86
GPN3-207ENST00000550228 KRTAP4-12Q9BQ66 201 aa3.41□□□□□ -1.86
GPN3-207ENST00000550228 MT1XP80297 61 aa3.4□□□□□ -1.87
GPN3-207ENST00000550228 FSIP2Q5CZC0 6907 aa3.39□□□□□ -1.87
GPN3-207ENST00000550228 KRTAP10-5P60370 271 aa3.39□□□□□ -1.87
GPN3-207ENST00000550228 PRO2289Q9P1D8 64 aa3.38□□□□□ -1.87
GPN3-207ENST00000550228 LCE3BQ5TA77 95 aa3.36□□□□□ -1.87
GPN3-207ENST00000550228 KRTAP9-9Q9BYP9 154 aa3.33□□□□□ -1.88
GPN3-207ENST00000550228 KRTAP9-4Q9BYQ2 154 aa3.33□□□□□ -1.88
GPN3-207ENST00000550228 C10orf95Q9H7T3 257 aa3.31□□□□□ -1.88
GPN3-207ENST00000550228 FCGBPQ9Y6R7 5405 aaPredicted RBP3.3□□□□□ -1.88
GPN3-207ENST00000550228 KRTAP4-8A0A0G2JLE6 195 aa3.28□□□□□ -1.88
GPN3-207ENST00000550228 KRTAP10-7P60409 375 aaPredicted RBP3.26□□□□□ -1.89
GPN3-207ENST00000550228 ROMO1P60602 79 aa3.24□□□□□ -1.89
GPN3-207ENST00000550228 TNP1P09430 55 aa3.23□□□□□ -1.89
GPN3-207ENST00000550228 PRO0628Q9UI54 55 aa3.22□□□□□ -1.89
GPN3-207ENST00000550228 KRTAP10-12P60413 245 aa3.21□□□□□ -1.9
GPN3-207ENST00000550228 PMAIP1Q13794 54 aa3.21□□□□□ -1.9
GPN3-207ENST00000550228 KRTAP25-1Q3LHN0 102 aa3.19□□□□□ -1.9
GPN3-207ENST00000550228 LCE1DQ5T752 114 aa3.15□□□□□ -1.91
GPN3-207ENST00000550228 KRTAP4-7Q9BYR0 210 aa3.15□□□□□ -1.91
GPN3-207ENST00000550228 LCE3AQ5TA76 89 aa3.14□□□□□ -1.91
GPN3-207ENST00000550228 KRTAP8-1Q8IUC2 63 aa3.13□□□□□ -1.91
GPN3-207ENST00000550228 KRTAP9-7A8MTY7 169 aa3.12□□□□□ -1.91
GPN3-207ENST00000550228 KMT2DO14686 5537 aa3.11□□□□□ -1.91
GPN3-207ENST00000550228 KRTAP4-9Q9BYQ8 210 aa3.08□□□□□ -1.92
GPN3-207ENST00000550228 LCE4AQ5TA78 99 aa3.06□□□□□ -1.92
GPN3-207ENST00000550228 KRTAP6-3Q3LI67 103 aa3.05□□□□□ -1.92
GPN3-207ENST00000550228 KRTAP19-5Q3LI72 72 aa3.05□□□□□ -1.92
GPN3-207ENST00000550228 PRAC1Q96KF2 57 aa3.05□□□□□ -1.92
GPN3-207ENST00000550228 SPRR2FQ96RM1 72 aa3.05□□□□□ -1.92
GPN3-207ENST00000550228 SYNE2Q8WXH0 6885 aaKnown RBP3.05□□□□□ -1.92
GPN3-207ENST00000550228 MACF1Q9UPN3 7388 aaKnown RBP3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms