RNA–Protein interactions for RNA: ENST00000550144.1

CTDSP2-206, Transcript of CTD small phosphatase 2, humanhuman

TSL 4

Gene CTDSP2, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-206ENST00000550144 COA5Q86WW8 74 aa5.75□□□□□ -1.49
CTDSP2-206ENST00000550144 CRCT1Q9UGL9 99 aa5.75□□□□□ -1.49
CTDSP2-206ENST00000550144 CHKB-CPT1BH3BT56 60 aa5.74□□□□□ -1.49
CTDSP2-206ENST00000550144 SERP1Q9Y6X1 66 aa5.74□□□□□ -1.49
CTDSP2-206ENST00000550144 FSIP2Q5CZC0 6907 aa5.72□□□□□ -1.49
CTDSP2-206ENST00000550144 S4R3F8 94 aa5.71□□□□□ -1.5
CTDSP2-206ENST00000550144 LCA10Q71F78 164 aa5.68□□□□□ -1.5
CTDSP2-206ENST00000550144 RPS28P62857 69 aaKnown RBP5.67□□□□□ -1.5
CTDSP2-206ENST00000550144 LCE2CQ5TA81 110 aa5.67□□□□□ -1.5
CTDSP2-206ENST00000550144 SPTSSBQ8NFR3 76 aa5.67□□□□□ -1.5
CTDSP2-206ENST00000550144 LCE2DQ5TA82 110 aaPredicted RBP5.66□□□□□ -1.5
CTDSP2-206ENST00000550144 KRTAP3-3Q9BYR6 98 aa5.63□□□□□ -1.51
CTDSP2-206ENST00000550144 CSAG1Q6PB30 78 aa5.61□□□□□ -1.51
CTDSP2-206ENST00000550144 MT1HP80294 61 aa5.58□□□□□ -1.52
CTDSP2-206ENST00000550144 SMIM26A0A096LP01 95 aa5.57□□□□□ -1.52
CTDSP2-206ENST00000550144 M0R2T5 61 aa5.55□□□□□ -1.52
CTDSP2-206ENST00000550144 FLGP20930 4061 aaPredicted RBP5.53□□□□□ -1.52
CTDSP2-206ENST00000550144 KRTAP9-7A8MTY7 169 aa5.5□□□□□ -1.53
CTDSP2-206ENST00000550144 V9GYY9 64 aa5.5□□□□□ -1.53
CTDSP2-206ENST00000550144 LINC01558Q9Y6Z2 57 aa5.49□□□□□ -1.53
CTDSP2-206ENST00000550144 SEC61GP60059 68 aa5.48□□□□□ -1.53
CTDSP2-206ENST00000550144 Q1T7F1 81 aa5.48□□□□□ -1.53
CTDSP2-206ENST00000550144 A0A1B0GU69 56 aa5.46□□□□□ -1.54
CTDSP2-206ENST00000550144 H0YAA0 97 aa5.46□□□□□ -1.54
CTDSP2-206ENST00000550144 PRR15LQ9BU68 103 aa5.45□□□□□ -1.54
CTDSP2-206ENST00000550144 ADM2Q7Z4H4 148 aa5.44□□□□□ -1.54
CTDSP2-206ENST00000550144 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.4□□□□□ -1.54
CTDSP2-206ENST00000550144 KRTAP10-6P60371 365 aaPredicted RBP5.4□□□□□ -1.54
CTDSP2-206ENST00000550144 KRTAP3-2Q9BYR7 98 aa5.4□□□□□ -1.54
CTDSP2-206ENST00000550144 PSPHP1O15172 72 aa5.39□□□□□ -1.55
CTDSP2-206ENST00000550144 P0C880 135 aa5.38□□□□□ -1.55
CTDSP2-206ENST00000550144 LORP23490 312 aaPredicted RBP5.36□□□□□ -1.55
CTDSP2-206ENST00000550144 KRTAP9-8Q9BYQ0 159 aa5.35□□□□□ -1.55
CTDSP2-206ENST00000550144 A0A1B0GU33 70 aa5.33□□□□□ -1.56
CTDSP2-206ENST00000550144 MT2AP02795 61 aa5.33□□□□□ -1.56
CTDSP2-206ENST00000550144 Q5VV11 94 aa5.33□□□□□ -1.56
CTDSP2-206ENST00000550144 KRTAP10-10P60014 251 aa5.31□□□□□ -1.56
CTDSP2-206ENST00000550144 MT1FP04733 61 aa5.29□□□□□ -1.56
CTDSP2-206ENST00000550144 CRIPTQ9P021 101 aa5.29□□□□□ -1.56
CTDSP2-206ENST00000550144 UQCR11O14957 56 aa5.27□□□□□ -1.57
CTDSP2-206ENST00000550144 M0QZ58 72 aa5.26□□□□□ -1.57
CTDSP2-206ENST00000550144 R4GN34 69 aa5.26□□□□□ -1.57
CTDSP2-206ENST00000550144 A6NED7 52 aa5.24□□□□□ -1.57
CTDSP2-206ENST00000550144 KRTAP13-4Q3LI77 160 aa5.22□□□□□ -1.57
CTDSP2-206ENST00000550144 SPATA8Q6RVD6 105 aa5.22□□□□□ -1.57
CTDSP2-206ENST00000550144 MIR22HGQ0VDD5 57 aa5.2□□□□□ -1.58
CTDSP2-206ENST00000550144 SPRR2GQ9BYE4 73 aa5.17□□□□□ -1.58
CTDSP2-206ENST00000550144 LINC01554Q52M75 96 aa5.16□□□□□ -1.58
CTDSP2-206ENST00000550144 KRTAP9-3Q9BYQ3 159 aa5.16□□□□□ -1.58
CTDSP2-206ENST00000550144 KRTAP19-1Q8IUB9 90 aa5.15□□□□□ -1.59
CTDSP2-206ENST00000550144 A0A0D9SG42 100 aa5.14□□□□□ -1.59
CTDSP2-206ENST00000550144 A8MU10 97 aa5.13□□□□□ -1.59
CTDSP2-206ENST00000550144 USH2AO75445 5202 aa5.13□□□□□ -1.59
CTDSP2-206ENST00000550144 CDC42SE1Q9NRR8 79 aa5.12□□□□□ -1.59
CTDSP2-206ENST00000550144 SSPOA2VEC9 5147 aa5.09□□□□□ -1.59
CTDSP2-206ENST00000550144 BRK1Q8WUW1 75 aa5.09□□□□□ -1.59
CTDSP2-206ENST00000550144 FCGBPQ9Y6R7 5405 aaPredicted RBP5.07□□□□□ -1.6
CTDSP2-206ENST00000550144 A6NN06 94 aa5.06□□□□□ -1.6
CTDSP2-206ENST00000550144 KRTAP19-8Q3LI54 63 aa5.05□□□□□ -1.6
CTDSP2-206ENST00000550144 SPINT4Q6UDR6 99 aa5.04□□□□□ -1.6
CTDSP2-206ENST00000550144 LCE2BO14633 110 aa5.03□□□□□ -1.6
CTDSP2-206ENST00000550144 K7ERS5 55 aa5.02□□□□□ -1.61
CTDSP2-206ENST00000550144 KRTAP12-1P59990 96 aa5.02□□□□□ -1.61
CTDSP2-206ENST00000550144 PLAC4Q8WY50 150 aa5.01□□□□□ -1.61
CTDSP2-206ENST00000550144 KRTAP12-2P59991 146 aa5□□□□□ -1.61
CTDSP2-206ENST00000550144 SYNE2Q8WXH0 6885 aaKnown RBP4.99□□□□□ -1.61
CTDSP2-206ENST00000550144 MT1BP07438 61 aa4.98□□□□□ -1.61
CTDSP2-206ENST00000550144 MACF1Q9UPN3 7388 aaKnown RBP4.97□□□□□ -1.61
CTDSP2-206ENST00000550144 CAMK2N1Q7Z7J9 78 aa4.93□□□□□ -1.62
CTDSP2-206ENST00000550144 PRO0628Q9UI54 55 aa4.91□□□□□ -1.62
CTDSP2-206ENST00000550144 KRTAP6-3Q3LI67 103 aa4.83□□□□□ -1.64
CTDSP2-206ENST00000550144 PMAIP1Q13794 54 aa4.81□□□□□ -1.64
CTDSP2-206ENST00000550144 PRO2289Q9P1D8 64 aa4.81□□□□□ -1.64
CTDSP2-206ENST00000550144 MT1XP80297 61 aa4.8□□□□□ -1.64
CTDSP2-206ENST00000550144 KRTAP10-5P60370 271 aa4.78□□□□□ -1.64
CTDSP2-206ENST00000550144 KRTAP19-6Q3LI70 58 aa4.77□□□□□ -1.65
CTDSP2-206ENST00000550144 ROMO1P60602 79 aa4.76□□□□□ -1.65
CTDSP2-206ENST00000550144 C10orf95Q9H7T3 257 aa4.76□□□□□ -1.65
CTDSP2-206ENST00000550144 NEBP20929 6669 aa4.74□□□□□ -1.65
CTDSP2-206ENST00000550144 KRTAP20-1Q3LI63 56 aa4.74□□□□□ -1.65
CTDSP2-206ENST00000550144 TNP1P09430 55 aa4.66□□□□□ -1.66
CTDSP2-206ENST00000550144 KRTAP25-1Q3LHN0 102 aa4.65□□□□□ -1.67
CTDSP2-206ENST00000550144 KRTAP10-7P60409 375 aaPredicted RBP4.59□□□□□ -1.67
CTDSP2-206ENST00000550144 MUC12Q9UKN1 5478 aa4.59□□□□□ -1.68
CTDSP2-206ENST00000550144 KTN1-AS1Q86SY8 53 aa4.57□□□□□ -1.68
CTDSP2-206ENST00000550144 KRTAP10-12P60413 245 aa4.56□□□□□ -1.68
CTDSP2-206ENST00000550144 PRAC1Q96KF2 57 aa4.5□□□□□ -1.69
CTDSP2-206ENST00000550144 KRTAP23-1A1A580 65 aa4.48□□□□□ -1.69
CTDSP2-206ENST00000550144 PP632Q6XCG6 107 aa4.47□□□□□ -1.69
CTDSP2-206ENST00000550144 KRTAP2-3P0C7H8 128 aa4.46□□□□□ -1.7
CTDSP2-206ENST00000550144 LCE3AQ5TA76 89 aa4.46□□□□□ -1.7
CTDSP2-206ENST00000550144 KRTAP2-4Q9BYR9 128 aa4.46□□□□□ -1.7
CTDSP2-206ENST00000550144 KMT2DO14686 5537 aa4.44□□□□□ -1.7
CTDSP2-206ENST00000550144 KRTAP4-8A0A0G2JLE6 195 aa4.43□□□□□ -1.7
CTDSP2-206ENST00000550144 KRTAP4-8Q9BYQ9 185 aa4.43□□□□□ -1.7
CTDSP2-206ENST00000550144 MDN1Q9NU22 5596 aa4.42□□□□□ -1.7
CTDSP2-206ENST00000550144 KRTAP5-9P26371 169 aa4.39□□□□□ -1.71
CTDSP2-206ENST00000550144 KRTAP8-1Q8IUC2 63 aa4.38□□□□□ -1.71
CTDSP2-206ENST00000550144 SVIPQ8NHG7 77 aa4.33□□□□□ -1.72
CTDSP2-206ENST00000550144 KRTAP19-5Q3LI72 72 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms