RNA–Protein interactions for RNA: ENST00000549766.5

TGFBR1-207, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 5

Gene TGFBR1, Length 1,678 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-207ENST00000549766 SPTSSBQ8NFR3 76 aa12.31□□□□□ -0.44
TGFBR1-207ENST00000549766 H1FX-AS1Q4G0G2 97 aa12.3□□□□□ -0.44
TGFBR1-207ENST00000549766 PSPHP1O15172 72 aa12.29□□□□□ -0.44
TGFBR1-207ENST00000549766 RNF213Q63HN8 5207 aa12.28□□□□□ -0.44
TGFBR1-207ENST00000549766 PRR15LQ9BU68 103 aa12.26□□□□□ -0.45
TGFBR1-207ENST00000549766 KRTAP3-3Q9BYR6 98 aa12.24□□□□□ -0.45
TGFBR1-207ENST00000549766 Q5VV11 94 aa12.23□□□□□ -0.45
TGFBR1-207ENST00000549766 LCA10Q71F78 164 aa12.23□□□□□ -0.45
TGFBR1-207ENST00000549766 S4R3F8 94 aa12.22□□□□□ -0.45
TGFBR1-207ENST00000549766 KRTAP19-2Q3LHN2 52 aa12.15□□□□□ -0.46
TGFBR1-207ENST00000549766 A0A1B0GU69 56 aa12.13□□□□□ -0.47
TGFBR1-207ENST00000549766 MUC2Q02817 5179 aa12.04□□□□□ -0.48
TGFBR1-207ENST00000549766 SEC61GP60059 68 aa12□□□□□ -0.49
TGFBR1-207ENST00000549766 CSAG1Q6PB30 78 aa11.94□□□□□ -0.5
TGFBR1-207ENST00000549766 A6NED7 52 aa11.9□□□□□ -0.5
TGFBR1-207ENST00000549766 BRK1Q8WUW1 75 aa11.85□□□□□ -0.51
TGFBR1-207ENST00000549766 KRTAP3-2Q9BYR7 98 aa11.84□□□□□ -0.51
TGFBR1-207ENST00000549766 KRTAP10-6P60371 365 aaPredicted RBP11.83□□□□□ -0.52
TGFBR1-207ENST00000549766 UQCR11O14957 56 aa11.79□□□□□ -0.52
TGFBR1-207ENST00000549766 FLGP20930 4061 aaPredicted RBP11.79□□□□□ -0.52
TGFBR1-207ENST00000549766 LCE2CQ5TA81 110 aa11.78□□□□□ -0.52
TGFBR1-207ENST00000549766 H0YAA0 97 aa11.75□□□□□ -0.53
TGFBR1-207ENST00000549766 CDC42SE1Q9NRR8 79 aa11.75□□□□□ -0.53
TGFBR1-207ENST00000549766 A0A1B0GU33 70 aa11.74□□□□□ -0.53
TGFBR1-207ENST00000549766 A8MU10 97 aa11.73□□□□□ -0.53
TGFBR1-207ENST00000549766 SPATA8Q6RVD6 105 aa11.71□□□□□ -0.54
TGFBR1-207ENST00000549766 ADM2Q7Z4H4 148 aa11.7□□□□□ -0.54
TGFBR1-207ENST00000549766 P0C880 135 aa11.68□□□□□ -0.54
TGFBR1-207ENST00000549766 PRO0628Q9UI54 55 aa11.68□□□□□ -0.54
TGFBR1-207ENST00000549766 MIR22HGQ0VDD5 57 aa11.66□□□□□ -0.54
TGFBR1-207ENST00000549766 KRTAP9-2Q9BYQ4 174 aa11.61□□□□□ -0.55
TGFBR1-207ENST00000549766 FAT4Q6V0I7 4981 aa11.56□□□□□ -0.56
TGFBR1-207ENST00000549766 MT1HP80294 61 aa11.51□□□□□ -0.57
TGFBR1-207ENST00000549766 KRTAP13-4Q3LI77 160 aa11.51□□□□□ -0.57
TGFBR1-207ENST00000549766 LCE2AQ5TA79 106 aaPredicted RBP11.47□□□□□ -0.57
TGFBR1-207ENST00000549766 M0QZ58 72 aa11.39□□□□□ -0.59
TGFBR1-207ENST00000549766 KRTAP9-6A0A140TA67 174 aa11.36□□□□□ -0.59
TGFBR1-207ENST00000549766 LORP23490 312 aaPredicted RBP11.33□□□□□ -0.6
TGFBR1-207ENST00000549766 M0R2T5 61 aa11.32□□□□□ -0.6
TGFBR1-207ENST00000549766 R4GN34 69 aa11.26□□□□□ -0.61
TGFBR1-207ENST00000549766 A0A0D9SG42 100 aa11.22□□□□□ -0.61
TGFBR1-207ENST00000549766 PMAIP1Q13794 54 aa11.21□□□□□ -0.61
TGFBR1-207ENST00000549766 A6NN06 94 aa11.2□□□□□ -0.62
TGFBR1-207ENST00000549766 CRIPTQ9P021 101 aa11.17□□□□□ -0.62
TGFBR1-207ENST00000549766 KRTAP9-8Q9BYQ0 159 aa11.13□□□□□ -0.63
TGFBR1-207ENST00000549766 MT2AP02795 61 aa11.08□□□□□ -0.64
TGFBR1-207ENST00000549766 K7ERS5 55 aa11.07□□□□□ -0.64
TGFBR1-207ENST00000549766 KRTAP12-1P59990 96 aa11.07□□□□□ -0.64
TGFBR1-207ENST00000549766 KRTAP12-2P59991 146 aa11.04□□□□□ -0.64
TGFBR1-207ENST00000549766 LINC01554Q52M75 96 aa11.03□□□□□ -0.64
TGFBR1-207ENST00000549766 MT1FP04733 61 aa11.02□□□□□ -0.64
TGFBR1-207ENST00000549766 LCE2DQ5TA82 110 aaPredicted RBP11□□□□□ -0.65
TGFBR1-207ENST00000549766 SVIPQ8NHG7 77 aa10.96□□□□□ -0.65
TGFBR1-207ENST00000549766 SPINT4Q6UDR6 99 aa10.95□□□□□ -0.66
TGFBR1-207ENST00000549766 KRTAP10-10P60014 251 aa10.95□□□□□ -0.66
TGFBR1-207ENST00000549766 SPRR2GQ9BYE4 73 aa10.95□□□□□ -0.66
TGFBR1-207ENST00000549766 KRTAP19-1Q8IUB9 90 aa10.9□□□□□ -0.66
TGFBR1-207ENST00000549766 CRCT1Q9UGL9 99 aa10.89□□□□□ -0.67
TGFBR1-207ENST00000549766 FSIP2Q5CZC0 6907 aa10.88□□□□□ -0.67
TGFBR1-207ENST00000549766 KTN1-AS1Q86SY8 53 aa10.8□□□□□ -0.68
TGFBR1-207ENST00000549766 KRTAP9-3Q9BYQ3 159 aa10.73□□□□□ -0.69
TGFBR1-207ENST00000549766 ROMO1P60602 79 aa10.68□□□□□ -0.7
TGFBR1-207ENST00000549766 KRTAP19-8Q3LI54 63 aa10.64□□□□□ -0.71
TGFBR1-207ENST00000549766 CAMK2N1Q7Z7J9 78 aa10.53□□□□□ -0.72
TGFBR1-207ENST00000549766 PLAC4Q8WY50 150 aa10.53□□□□□ -0.72
TGFBR1-207ENST00000549766 PRAC1Q96KF2 57 aa10.51□□□□□ -0.73
TGFBR1-207ENST00000549766 MT1BP07438 61 aa10.49□□□□□ -0.73
TGFBR1-207ENST00000549766 C10orf95Q9H7T3 257 aa10.47□□□□□ -0.73
TGFBR1-207ENST00000549766 LCE2BO14633 110 aa10.4□□□□□ -0.74
TGFBR1-207ENST00000549766 KRTAP25-1Q3LHN0 102 aa10.26□□□□□ -0.77
TGFBR1-207ENST00000549766 KRTAP9-7A8MTY7 169 aa10.17□□□□□ -0.78
TGFBR1-207ENST00000549766 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.17□□□□□ -0.78
TGFBR1-207ENST00000549766 MT1XP80297 61 aa10.17□□□□□ -0.78
TGFBR1-207ENST00000549766 KRTAP10-5P60370 271 aa10.15□□□□□ -0.78
TGFBR1-207ENST00000549766 USH2AO75445 5202 aa10.1□□□□□ -0.79
TGFBR1-207ENST00000549766 TNP1P09430 55 aa10.08□□□□□ -0.8
TGFBR1-207ENST00000549766 SSPOA2VEC9 5147 aa10.06□□□□□ -0.8
TGFBR1-207ENST00000549766 PRO2289Q9P1D8 64 aa9.98□□□□□ -0.81
TGFBR1-207ENST00000549766 FCGBPQ9Y6R7 5405 aaPredicted RBP9.88□□□□□ -0.83
TGFBR1-207ENST00000549766 KRTAP23-1A1A580 65 aa9.87□□□□□ -0.83
TGFBR1-207ENST00000549766 PP632Q6XCG6 107 aa9.87□□□□□ -0.83
TGFBR1-207ENST00000549766 KRTAP10-7P60409 375 aaPredicted RBP9.76□□□□□ -0.85
TGFBR1-207ENST00000549766 KRTAP19-6Q3LI70 58 aa9.74□□□□□ -0.85
TGFBR1-207ENST00000549766 MACF1Q9UPN3 7388 aaKnown RBP9.7□□□□□ -0.86
TGFBR1-207ENST00000549766 SYNE2Q8WXH0 6885 aaKnown RBP9.69□□□□□ -0.86
TGFBR1-207ENST00000549766 LCE3AQ5TA76 89 aa9.66□□□□□ -0.86
TGFBR1-207ENST00000549766 KRTAP10-12P60413 245 aa9.64□□□□□ -0.87
TGFBR1-207ENST00000549766 KRTAP8-1Q8IUC2 63 aa9.5□□□□□ -0.89
TGFBR1-207ENST00000549766 KRTAP6-3Q3LI67 103 aa9.36□□□□□ -0.91
TGFBR1-207ENST00000549766 KRTAP4-8A0A0G2JLE6 195 aa9.34□□□□□ -0.91
TGFBR1-207ENST00000549766 KRTAP4-8Q9BYQ9 185 aa9.34□□□□□ -0.91
TGFBR1-207ENST00000549766 KMT2DO14686 5537 aa9.29□□□□□ -0.92
TGFBR1-207ENST00000549766 KRTAP12-3P60328 96 aa9.26□□□□□ -0.93
TGFBR1-207ENST00000549766 NEBP20929 6669 aa9.2□□□□□ -0.94
TGFBR1-207ENST00000549766 KRTAP19-5Q3LI72 72 aa9.19□□□□□ -0.94
TGFBR1-207ENST00000549766 KRTAP15-1Q3LI76 137 aa9.13□□□□□ -0.95
TGFBR1-207ENST00000549766 KRTAP19-7Q3SYF9 63 aa9.08□□□□□ -0.96
TGFBR1-207ENST00000549766 MUC12Q9UKN1 5478 aa8.94□□□□□ -0.98
TGFBR1-207ENST00000549766 MT1EP04732 61 aa8.9□□□□□ -0.98
TGFBR1-207ENST00000549766 KRTAP20-1Q3LI63 56 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms