RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 RPL37P61927 97 aaKnown RBP10.49□□□□□ -0.73
CTDSP2-204ENST00000548823 DMAC1Q96GE9 116 aa10.49□□□□□ -0.73
CTDSP2-204ENST00000548823 COA5Q86WW8 74 aa10.47□□□□□ -0.73
CTDSP2-204ENST00000548823 ACYP2P14621 99 aa10.45□□□□□ -0.74
CTDSP2-204ENST00000548823 ATP11AUNQ6ZP68 121 aa10.44□□□□□ -0.74
CTDSP2-204ENST00000548823 FLGP20930 4061 aaPredicted RBP10.39□□□□□ -0.75
CTDSP2-204ENST00000548823 SPINK7P58062 85 aa10.39□□□□□ -0.75
CTDSP2-204ENST00000548823 SSPOA2VEC9 5147 aa10.38□□□□□ -0.75
CTDSP2-204ENST00000548823 A8MUN3 132 aa10.37□□□□□ -0.75
CTDSP2-204ENST00000548823 Q1T7F1 81 aa10.35□□□□□ -0.75
CTDSP2-204ENST00000548823 USH2AO75445 5202 aa10.35□□□□□ -0.75
CTDSP2-204ENST00000548823 V9GYY9 64 aa10.32□□□□□ -0.76
CTDSP2-204ENST00000548823 FCGBPQ9Y6R7 5405 aaPredicted RBP10.3□□□□□ -0.76
CTDSP2-204ENST00000548823 COX6B2Q6YFQ2 88 aa10.3□□□□□ -0.76
CTDSP2-204ENST00000548823 C4orf26Q17RF5 130 aa10.26□□□□□ -0.77
CTDSP2-204ENST00000548823 MPLKIPQ8TAP9 179 aa10.26□□□□□ -0.77
CTDSP2-204ENST00000548823 CHKB-CPT1BH3BT56 60 aa10.23□□□□□ -0.77
CTDSP2-204ENST00000548823 KRTAP3-1Q9BYR8 98 aa10.17□□□□□ -0.78
CTDSP2-204ENST00000548823 LINC01558Q9Y6Z2 57 aa10.17□□□□□ -0.78
CTDSP2-204ENST00000548823 SYNE2Q8WXH0 6885 aaKnown RBP10.12□□□□□ -0.79
CTDSP2-204ENST00000548823 KRTAP19-1Q8IUB9 90 aa10.11□□□□□ -0.79
CTDSP2-204ENST00000548823 MACF1Q9UPN3 7388 aaKnown RBP10.09□□□□□ -0.79
CTDSP2-204ENST00000548823 SPTSSBQ8NFR3 76 aa10.07□□□□□ -0.8
CTDSP2-204ENST00000548823 KRTAP9-8Q9BYQ0 159 aa10.07□□□□□ -0.8
CTDSP2-204ENST00000548823 PSPHP1O15172 72 aa10.03□□□□□ -0.8
CTDSP2-204ENST00000548823 PRR15LQ9BU68 103 aa10.02□□□□□ -0.8
CTDSP2-204ENST00000548823 Q5VV11 94 aa10.01□□□□□ -0.81
CTDSP2-204ENST00000548823 LCE2BO14633 110 aa9.92□□□□□ -0.82
CTDSP2-204ENST00000548823 RBM12B-AS1Q9P1G2 102 aa9.92□□□□□ -0.82
CTDSP2-204ENST00000548823 A0A1B0GU69 56 aa9.89□□□□□ -0.83
CTDSP2-204ENST00000548823 H1FX-AS1Q4G0G2 97 aa9.89□□□□□ -0.83
CTDSP2-204ENST00000548823 S4R3F8 94 aa9.84□□□□□ -0.83
CTDSP2-204ENST00000548823 MT2AP02795 61 aa9.82□□□□□ -0.84
CTDSP2-204ENST00000548823 KRTAP6-3Q3LI67 103 aa9.81□□□□□ -0.84
CTDSP2-204ENST00000548823 SEC61GP60059 68 aa9.8□□□□□ -0.84
CTDSP2-204ENST00000548823 LCA10Q71F78 164 aa9.8□□□□□ -0.84
CTDSP2-204ENST00000548823 KRTAP3-3Q9BYR6 98 aa9.8□□□□□ -0.84
CTDSP2-204ENST00000548823 KRTAP9-3Q9BYQ3 159 aa9.78□□□□□ -0.84
CTDSP2-204ENST00000548823 BRK1Q8WUW1 75 aa9.77□□□□□ -0.84
CTDSP2-204ENST00000548823 A6NED7 52 aa9.75□□□□□ -0.85
CTDSP2-204ENST00000548823 MT1FP04733 61 aa9.74□□□□□ -0.85
CTDSP2-204ENST00000548823 PRO0628Q9UI54 55 aa9.74□□□□□ -0.85
CTDSP2-204ENST00000548823 KRTAP19-6Q3LI70 58 aa9.73□□□□□ -0.85
CTDSP2-204ENST00000548823 CDC42SE1Q9NRR8 79 aa9.69□□□□□ -0.86
CTDSP2-204ENST00000548823 KRTAP10-10P60014 251 aa9.67□□□□□ -0.86
CTDSP2-204ENST00000548823 UQCR11O14957 56 aa9.66□□□□□ -0.86
CTDSP2-204ENST00000548823 CSAG1Q6PB30 78 aa9.62□□□□□ -0.87
CTDSP2-204ENST00000548823 SPATA8Q6RVD6 105 aa9.6□□□□□ -0.87
CTDSP2-204ENST00000548823 KRTAP3-2Q9BYR7 98 aa9.6□□□□□ -0.87
CTDSP2-204ENST00000548823 NEBP20929 6669 aa9.58□□□□□ -0.88
CTDSP2-204ENST00000548823 A0A1B0GU33 70 aa9.54□□□□□ -0.88
CTDSP2-204ENST00000548823 MIR22HGQ0VDD5 57 aa9.54□□□□□ -0.88
CTDSP2-204ENST00000548823 A8MU10 97 aa9.52□□□□□ -0.88
CTDSP2-204ENST00000548823 H0YAA0 97 aa9.5□□□□□ -0.89
CTDSP2-204ENST00000548823 KRTAP20-1Q3LI63 56 aa9.48□□□□□ -0.89
CTDSP2-204ENST00000548823 MUC12Q9UKN1 5478 aa9.4□□□□□ -0.9
CTDSP2-204ENST00000548823 ADM2Q7Z4H4 148 aa9.39□□□□□ -0.91
CTDSP2-204ENST00000548823 SVIPQ8NHG7 77 aa9.38□□□□□ -0.91
CTDSP2-204ENST00000548823 P0C880 135 aa9.37□□□□□ -0.91
CTDSP2-204ENST00000548823 PMAIP1Q13794 54 aa9.27□□□□□ -0.93
CTDSP2-204ENST00000548823 M0QZ58 72 aa9.24□□□□□ -0.93
CTDSP2-204ENST00000548823 A6NN06 94 aa9.24□□□□□ -0.93
CTDSP2-204ENST00000548823 KRTAP13-4Q3LI77 160 aa9.24□□□□□ -0.93
CTDSP2-204ENST00000548823 K7ERS5 55 aa9.11□□□□□ -0.95
CTDSP2-204ENST00000548823 R4GN34 69 aa9.06□□□□□ -0.96
CTDSP2-204ENST00000548823 MDN1Q9NU22 5596 aa9.04□□□□□ -0.96
CTDSP2-204ENST00000548823 A0A0D9SG42 100 aa9.03□□□□□ -0.96
CTDSP2-204ENST00000548823 KRTAP2-3P0C7H8 128 aa9.02□□□□□ -0.97
CTDSP2-204ENST00000548823 KRTAP2-4Q9BYR9 128 aa9.02□□□□□ -0.97
CTDSP2-204ENST00000548823 CRIPTQ9P021 101 aa9.02□□□□□ -0.97
CTDSP2-204ENST00000548823 KRTAP5-9P26371 169 aa9.01□□□□□ -0.97
CTDSP2-204ENST00000548823 KTN1-AS1Q86SY8 53 aa8.99□□□□□ -0.97
CTDSP2-204ENST00000548823 KMT2DO14686 5537 aa8.97□□□□□ -0.97
CTDSP2-204ENST00000548823 KRTAP12-1P59990 96 aa8.94□□□□□ -0.98
CTDSP2-204ENST00000548823 KRTAP12-2P59991 146 aa8.88□□□□□ -0.99
CTDSP2-204ENST00000548823 SPINT4Q6UDR6 99 aa8.84□□□□□ -0.99
CTDSP2-204ENST00000548823 LINC01554Q52M75 96 aa8.82□□□□□ -1
CTDSP2-204ENST00000548823 ROMO1P60602 79 aa8.75□□□□□ -1.01
CTDSP2-204ENST00000548823 SPRR2GQ9BYE4 73 aa8.74□□□□□ -1.01
CTDSP2-204ENST00000548823 MT1BP07438 61 aa8.71□□□□□ -1.02
CTDSP2-204ENST00000548823 KRTAP10-5P60370 271 aa8.7□□□□□ -1.02
CTDSP2-204ENST00000548823 KRTAP2-2Q9BYT5 123 aa8.69□□□□□ -1.02
CTDSP2-204ENST00000548823 KRTAP2-1Q9BYU5 128 aa8.69□□□□□ -1.02
CTDSP2-204ENST00000548823 SPRR2EP22531 72 aa8.61□□□□□ -1.03
CTDSP2-204ENST00000548823 SPRR2BP35325 72 aa8.61□□□□□ -1.03
CTDSP2-204ENST00000548823 SPRR2AP35326 72 aa8.61□□□□□ -1.03
CTDSP2-204ENST00000548823 PRAC1Q96KF2 57 aa8.61□□□□□ -1.03
CTDSP2-204ENST00000548823 KRTAP19-8Q3LI54 63 aa8.58□□□□□ -1.04
CTDSP2-204ENST00000548823 SPRR2FQ96RM1 72 aa8.52□□□□□ -1.05
CTDSP2-204ENST00000548823 CAMK2N1Q7Z7J9 78 aa8.49□□□□□ -1.05
CTDSP2-204ENST00000548823 KRTAP25-1Q3LHN0 102 aa8.46□□□□□ -1.06
CTDSP2-204ENST00000548823 PLAC4Q8WY50 150 aa8.46□□□□□ -1.06
CTDSP2-204ENST00000548823 C10orf95Q9H7T3 257 aa8.44□□□□□ -1.06
CTDSP2-204ENST00000548823 GPR98Q8WXG9 6306 aa8.39□□□□□ -1.07
CTDSP2-204ENST00000548823 LCE1AQ5T7P2 110 aa8.38□□□□□ -1.07
CTDSP2-204ENST00000548823 SPRR2DP22532 72 aa8.33□□□□□ -1.08
CTDSP2-204ENST00000548823 KRTAP8-1Q8IUC2 63 aa8.22□□□□□ -1.09
CTDSP2-204ENST00000548823 LCE3BQ5TA77 95 aa8.18□□□□□ -1.1
CTDSP2-204ENST00000548823 TNP1P09430 55 aa8.17□□□□□ -1.1
CTDSP2-204ENST00000548823 KRTAP23-1A1A580 65 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms