RNA–Protein interactions for RNA: ENST00000547430.2

HIF1A-205, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-205ENST00000547430 BIRC6Q9NR09 4857 aa2.86□□□□□ -1.95
HIF1A-205ENST00000547430 HIST1H4AP62805 103 aaKnown RBP2.85□□□□□ -1.95
HIF1A-205ENST00000547430 PCOTHQ58A44 107 aa2.85□□□□□ -1.95
HIF1A-205ENST00000547430 ATP5EP2Q5VTU8 51 aa2.85□□□□□ -1.95
HIF1A-205ENST00000547430 SS18L2Q9UHA2 77 aa2.85□□□□□ -1.95
HIF1A-205ENST00000547430 PKHD1L1Q86WI1 4243 aa2.85□□□□□ -1.95
HIF1A-205ENST00000547430 KRTAP12-1P59990 96 aa2.84□□□□□ -1.95
HIF1A-205ENST00000547430 SPAG11AQ6PDA7 123 aa2.84□□□□□ -1.95
HIF1A-205ENST00000547430 LINC00472Q9H8W2 130 aa2.84□□□□□ -1.95
HIF1A-205ENST00000547430 FAM236DA0A1B0GTK5 79 aa2.83□□□□□ -1.96
HIF1A-205ENST00000547430 SPINK1P00995 79 aa2.83□□□□□ -1.96
HIF1A-205ENST00000547430 FAM236CP0DP71 79 aa2.83□□□□□ -1.96
HIF1A-205ENST00000547430 TMEM258P61165 79 aa2.83□□□□□ -1.96
HIF1A-205ENST00000547430 KRTAP13-4Q3LI77 160 aa2.83□□□□□ -1.96
HIF1A-205ENST00000547430 Q5XG85 94 aa2.83□□□□□ -1.96
HIF1A-205ENST00000547430 Q96NJ1 140 aa2.83□□□□□ -1.96
HIF1A-205ENST00000547430 LIMD2Q9BT23 127 aa2.83□□□□□ -1.96
HIF1A-205ENST00000547430 IMUPQ9GZP8 106 aa2.83□□□□□ -1.96
HIF1A-205ENST00000547430 A0A087WVE0 104 aa2.82□□□□□ -1.96
HIF1A-205ENST00000547430 J3KT08 172 aa2.82□□□□□ -1.96
HIF1A-205ENST00000547430 ASB16-AS1Q495Z4 193 aa2.82□□□□□ -1.96
HIF1A-205ENST00000547430 FLG2Q5D862 2391 aaPredicted RBP2.82□□□□□ -1.96
HIF1A-205ENST00000547430 HERC2O95714 4834 aa2.81□□□□□ -1.96
HIF1A-205ENST00000547430 K7EQZ3 153 aa2.81□□□□□ -1.96
HIF1A-205ENST00000547430 KRTAP5-2Q701N4 177 aa2.81□□□□□ -1.96
HIF1A-205ENST00000547430 KTN1-AS1Q86SY8 53 aa2.81□□□□□ -1.96
HIF1A-205ENST00000547430 NDUFB1O75438 58 aa2.8□□□□□ -1.96
HIF1A-205ENST00000547430 MT1HL1P0DM35 61 aa2.8□□□□□ -1.96
HIF1A-205ENST00000547430 RPS29P62273 56 aaKnown RBP2.8□□□□□ -1.96
HIF1A-205ENST00000547430 PRR15Q8IV56 129 aa2.8□□□□□ -1.96
HIF1A-205ENST00000547430 FAM236AA0A1B0GUQ0 79 aa2.79□□□□□ -1.96
HIF1A-205ENST00000547430 FAM236BA0A1B0GV22 79 aa2.79□□□□□ -1.96
HIF1A-205ENST00000547430 SCGB1A1P11684 91 aa2.79□□□□□ -1.96
HIF1A-205ENST00000547430 FAT3Q8TDW7 4589 aa2.79□□□□□ -1.96
HIF1A-205ENST00000547430 LRP1Q07954 4544 aaKnown RBP2.79□□□□□ -1.96
HIF1A-205ENST00000547430 ABCA13Q86UQ4 5058 aa2.78□□□□□ -1.96
HIF1A-205ENST00000547430 MMP24-AS1A0A0U1RRL7 71 aa2.77□□□□□ -1.97
HIF1A-205ENST00000547430 HCG22E2RYF7 251 aa2.77□□□□□ -1.97
HIF1A-205ENST00000547430 KRTAP12-4P60329 112 aa2.77□□□□□ -1.97
HIF1A-205ENST00000547430 WFDC13Q8IUB5 93 aa2.77□□□□□ -1.97
HIF1A-205ENST00000547430 RETNLBQ9BQ08 111 aa2.77□□□□□ -1.97
HIF1A-205ENST00000547430 CASC2Q6XLA1 102 aa2.76□□□□□ -1.97
HIF1A-205ENST00000547430 DMBT1Q9UGM3 2413 aaPredicted RBP2.76□□□□□ -1.97
HIF1A-205ENST00000547430 hDV103S1A0JD37 113 aa2.75□□□□□ -1.97
HIF1A-205ENST00000547430 ATOX1O00244 68 aa2.75□□□□□ -1.97
HIF1A-205ENST00000547430 TNXBP22105 4242 aa2.74□□□□□ -1.97
HIF1A-205ENST00000547430 TMEM254Q8TBM7 123 aa2.74□□□□□ -1.97
HIF1A-205ENST00000547430 MYCBP2O75592 4640 aa2.73□□□□□ -1.97
HIF1A-205ENST00000547430 MRPL34Q9BQ48 92 aaKnown RBP2.73□□□□□ -1.97
HIF1A-205ENST00000547430 C9orf92A6NGG3 77 aa2.72□□□□□ -1.97
HIF1A-205ENST00000547430 FP248Q71RG6 208 aaPredicted RBP2.72□□□□□ -1.97
HIF1A-205ENST00000547430 SMIM20Q8N5G0 67 aa2.72□□□□□ -1.97
HIF1A-205ENST00000547430 SERP2Q8N6R1 65 aa2.72□□□□□ -1.97
HIF1A-205ENST00000547430 COX7CP15954 63 aa2.71□□□□□ -1.98
HIF1A-205ENST00000547430 UQCRQO14949 82 aa2.7□□□□□ -1.98
HIF1A-205ENST00000547430 CCDC179H3BU77 68 aa2.69□□□□□ -1.98
HIF1A-205ENST00000547430 TP53AIP1Q9HCN2 124 aa2.69□□□□□ -1.98
HIF1A-205ENST00000547430 PCLOQ9Y6V0 5065 aa2.68□□□□□ -1.98
HIF1A-205ENST00000547430 COA5Q86WW8 74 aa2.68□□□□□ -1.98
HIF1A-205ENST00000547430 C20orf197Q8N268 126 aa2.68□□□□□ -1.98
HIF1A-205ENST00000547430 TRAV22A0A0B4J277 110 aa2.67□□□□□ -1.98
HIF1A-205ENST00000547430 H0Y9P7 68 aa2.67□□□□□ -1.98
HIF1A-205ENST00000547430 C7orf65Q6ZTY9 151 aa2.67□□□□□ -1.98
HIF1A-205ENST00000547430 LINC00208Q96KT6 92 aa2.66□□□□□ -1.98
HIF1A-205ENST00000547430 SNURFQ9Y675 71 aa2.66□□□□□ -1.98
HIF1A-205ENST00000547430 RPL37P61927 97 aaKnown RBP2.64□□□□□ -1.99
HIF1A-205ENST00000547430 KLKP1Q107X0 134 aa2.64□□□□□ -1.99
HIF1A-205ENST00000547430 Q1T7F1 81 aa2.64□□□□□ -1.99
HIF1A-205ENST00000547430 CYSTM1Q9H1C7 97 aa2.64□□□□□ -1.99
HIF1A-205ENST00000547430 LOC101927531A0A1B0GV80 90 aa2.63□□□□□ -1.99
HIF1A-205ENST00000547430 ATP11AUNQ6ZP68 121 aa2.63□□□□□ -1.99
HIF1A-205ENST00000547430 LINC01554Q52M75 96 aa2.62□□□□□ -1.99
HIF1A-205ENST00000547430 H7BZZ5 65 aa2.61□□□□□ -1.99
HIF1A-205ENST00000547430 NDUFC1O43677 76 aa2.61□□□□□ -1.99
HIF1A-205ENST00000547430 LCA10Q71F78 164 aa2.61□□□□□ -1.99
HIF1A-205ENST00000547430 CYP4F30PQ9H0H9 118 aa2.61□□□□□ -1.99
HIF1A-205ENST00000547430 SPINK7P58062 85 aa2.59□□□□□ -1.99
HIF1A-205ENST00000547430 HERC1Q15751 4861 aa2.58□□□□□ -2
HIF1A-205ENST00000547430 HMCN2Q8NDA2 5059 aa2.58□□□□□ -2
HIF1A-205ENST00000547430 LPAP08519 4548 aa2.57□□□□□ -2
HIF1A-205ENST00000547430 KRTAP5-7Q6L8G8 165 aa2.57□□□□□ -2
HIF1A-205ENST00000547430 LRP2P98164 4655 aa2.57□□□□□ -2
HIF1A-205ENST00000547430 ATP5EP56381 51 aaPredicted RBP2.54□□□□□ -2
HIF1A-205ENST00000547430 MUC17Q685J3 4493 aa2.53□□□□□ -2
HIF1A-205ENST00000547430 KRTAP4-1Q9BYQ7 146 aa2.53□□□□□ -2
HIF1A-205ENST00000547430 COX6B2Q6YFQ2 88 aa2.52□□□□□ -2.01
HIF1A-205ENST00000547430 DMAC1Q96GE9 116 aa2.52□□□□□ -2.01
HIF1A-205ENST00000547430 ACYP2P14621 99 aa2.51□□□□□ -2.01
HIF1A-205ENST00000547430 SERP1Q9Y6X1 66 aa2.5□□□□□ -2.01
HIF1A-205ENST00000547430 RNF213Q63HN8 5207 aa2.48□□□□□ -2.01
HIF1A-205ENST00000547430 RPS28P62857 69 aaKnown RBP2.48□□□□□ -2.01
HIF1A-205ENST00000547430 CHKB-CPT1BH3BT56 60 aa2.47□□□□□ -2.01
HIF1A-205ENST00000547430 H1FX-AS1Q4G0G2 97 aa2.47□□□□□ -2.01
HIF1A-205ENST00000547430 UBR4Q5T4S7 5183 aa2.46□□□□□ -2.02
HIF1A-205ENST00000547430 KRTAP19-2Q3LHN2 52 aa2.45□□□□□ -2.02
HIF1A-205ENST00000547430 S4R3F8 94 aa2.44□□□□□ -2.02
HIF1A-205ENST00000547430 SPTSSBQ8NFR3 76 aa2.42□□□□□ -2.02
HIF1A-205ENST00000547430 MUC2Q02817 5179 aa2.4□□□□□ -2.03
HIF1A-205ENST00000547430 CSAG1Q6PB30 78 aa2.39□□□□□ -2.03
HIF1A-205ENST00000547430 LINC01558Q9Y6Z2 57 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms