RNA–Protein interactions for RNA: ENST00000547430.2

HIF1A-205, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-205ENST00000547430 CHIC1Q5VXU3 224 aa28.93■■■□□ 2.22
HIF1A-205ENST00000547430 AEBP2Q6ZN18 517 aaPredicted RBP28.86■■■□□ 2.21
HIF1A-205ENST00000547430 PHF23Q9BUL5 403 aaPredicted RBP25.54■■□□□ 1.68
HIF1A-205ENST00000547430 SENP3Q9H4L4 574 aaPredicted RBP24.34■■□□□ 1.49
HIF1A-205ENST00000547430 PLPPR3Q6T4P5 718 aa23.82■■□□□ 1.4
HIF1A-205ENST00000547430 FOXD1Q16676 465 aa22.5■■□□□ 1.19
HIF1A-205ENST00000547430 ADRA2BP18089 450 aa22.28■■□□□ 1.16
HIF1A-205ENST00000547430 PPP6R1Q9UPN7 881 aa22.26■■□□□ 1.15
HIF1A-205ENST00000547430 KCNA4P22459 653 aa21.47■■□□□ 1.03
HIF1A-205ENST00000547430 PIAS4Q8N2W9 510 aaPredicted RBP21.39■■□□□ 1.01
HIF1A-205ENST00000547430 PPP4R3CPQ6ZMV5 832 aa21.08■□□□□ 0.97
HIF1A-205ENST00000547430 EHMT2Q96KQ7 1210 aa20.83■□□□□ 0.93
HIF1A-205ENST00000547430 NCBP3Q53F19 620 aaKnown RBP20.72■□□□□ 0.91
HIF1A-205ENST00000547430 SLC4A1APQ9BWU0 796 aaKnown RBP20.56■□□□□ 0.88
HIF1A-205ENST00000547430 NPM3O75607 178 aaKnown RBP20.46■□□□□ 0.87
HIF1A-205ENST00000547430 MSH5O43196 834 aa20.44■□□□□ 0.86
HIF1A-205ENST00000547430 SCAF1Q9H7N4 1312 aaKnown RBP20.34■□□□□ 0.85
HIF1A-205ENST00000547430 CNKSR2Q8WXI2 1034 aa20.32■□□□□ 0.84
HIF1A-205ENST00000547430 CSRNP3Q8WYN3 585 aa20.3■□□□□ 0.84
HIF1A-205ENST00000547430 MAPK8IP2Q13387 824 aaPredicted RBP19.96■□□□□ 0.79
HIF1A-205ENST00000547430 DNAJC5BQ9UF47 199 aa19.83■□□□□ 0.77
HIF1A-205ENST00000547430 ZBTB22O15209 634 aa19.79■□□□□ 0.76
HIF1A-205ENST00000547430 RNF216Q9NWF9 866 aaPredicted RBP19.76■□□□□ 0.75
HIF1A-205ENST00000547430 DMRT2Q9Y5R5 561 aa19.57■□□□□ 0.72
HIF1A-205ENST00000547430 FOXD4L1Q9NU39 408 aa19.54■□□□□ 0.72
HIF1A-205ENST00000547430 HOXD11P31277 338 aaPredicted RBP19.49■□□□□ 0.71
HIF1A-205ENST00000547430 SLC4A2P04920 1241 aa19.15■□□□□ 0.66
HIF1A-205ENST00000547430 MYCNP04198 464 aaPredicted RBP18.89■□□□□ 0.61
HIF1A-205ENST00000547430 ATXN8OSP0DMR3 200 aa18.8■□□□□ 0.6
HIF1A-205ENST00000547430 DCAF8L1A6NGE4 600 aa18.58■□□□□ 0.56
HIF1A-205ENST00000547430 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.49■□□□□ 0.55
HIF1A-205ENST00000547430 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.34■□□□□ 0.53
HIF1A-205ENST00000547430 HNRNPUL2Q1KMD3 747 aaKnown RBP18.34■□□□□ 0.53
HIF1A-205ENST00000547430 U3KPZ7 1027 aaPredicted RBP18.34■□□□□ 0.53
HIF1A-205ENST00000547430 ATF5Q9Y2D1 282 aaPredicted RBP18.32■□□□□ 0.52
HIF1A-205ENST00000547430 SAMD1Q6SPF0 538 aaPredicted RBP18.31■□□□□ 0.52
HIF1A-205ENST00000547430 FKBP8Q14318 412 aa18.27■□□□□ 0.52
HIF1A-205ENST00000547430 AMER1Q5JTC6 1135 aaPredicted RBP18.01■□□□□ 0.47
HIF1A-205ENST00000547430 RTN4Q9NQC3 1192 aaKnown RBP17.99■□□□□ 0.47
HIF1A-205ENST00000547430 APLP2Q06481 763 aa17.96■□□□□ 0.47
HIF1A-205ENST00000547430 ZNF219Q9P2Y4 722 aaPredicted RBP17.92■□□□□ 0.46
HIF1A-205ENST00000547430 RNF39Q9H2S5 420 aa17.61■□□□□ 0.41
HIF1A-205ENST00000547430 MKRN4PQ13434 485 aaPredicted RBP17.58■□□□□ 0.4
HIF1A-205ENST00000547430 SPINK5Q9NQ38 1064 aaPredicted RBP17.58■□□□□ 0.4
HIF1A-205ENST00000547430 TRHP20396 242 aaPredicted RBP17.53■□□□□ 0.4
HIF1A-205ENST00000547430 SPDYE4A6NLX3 237 aa17.52■□□□□ 0.4
HIF1A-205ENST00000547430 SLC24A1O60721 1099 aa17.5■□□□□ 0.39
HIF1A-205ENST00000547430 FBLN2P98095 1184 aa17.46■□□□□ 0.39
HIF1A-205ENST00000547430 POLA2Q14181 598 aa17.44■□□□□ 0.38
HIF1A-205ENST00000547430 CAPN15O75808 1086 aa17.43■□□□□ 0.38
HIF1A-205ENST00000547430 C1QBPQ07021 282 aaKnown RBP17.43■□□□□ 0.38
HIF1A-205ENST00000547430 PROM2Q8N271 834 aa17.42■□□□□ 0.38
HIF1A-205ENST00000547430 FBXO3Q9UK99 471 aa17.4■□□□□ 0.38
HIF1A-205ENST00000547430 POTEDQ86YR6 584 aa17.27■□□□□ 0.36
HIF1A-205ENST00000547430 ZBTB12Q9Y330 459 aaPredicted RBP17.23■□□□□ 0.35
HIF1A-205ENST00000547430 ABCB7O75027 752 aa17.17■□□□□ 0.34
HIF1A-205ENST00000547430 VASPP50552 380 aaPredicted RBP17.17■□□□□ 0.34
HIF1A-205ENST00000547430 DSG3P32926 999 aa17.02■□□□□ 0.32
HIF1A-205ENST00000547430 IFNLR1Q8IU57 520 aaPredicted RBP17■□□□□ 0.31
HIF1A-205ENST00000547430 ZNF692Q9BU19 519 aaPredicted RBP16.86■□□□□ 0.29
HIF1A-205ENST00000547430 SPDYE2BA6NHP3 402 aa16.84■□□□□ 0.29
HIF1A-205ENST00000547430 SPDYE6P0CI01 402 aa16.84■□□□□ 0.29
HIF1A-205ENST00000547430 SPDYE2Q495Y8 402 aa16.84■□□□□ 0.29
HIF1A-205ENST00000547430 OSCARQ8IYS5 282 aa16.84■□□□□ 0.29
HIF1A-205ENST00000547430 SSUH2Q9Y2M2 353 aa16.83■□□□□ 0.28
HIF1A-205ENST00000547430 PKD2Q13563 968 aa16.74■□□□□ 0.27
HIF1A-205ENST00000547430 STAG3Q9UJ98 1225 aa16.74■□□□□ 0.27
HIF1A-205ENST00000547430 PABPN1Q86U42 306 aaKnown RBP eCLIP16.67■□□□□ 0.26
HIF1A-205ENST00000547430 SPOCK2Q92563 424 aa16.65■□□□□ 0.26
HIF1A-205ENST00000547430 PLCB2Q00722 1185 aa16.63■□□□□ 0.25
HIF1A-205ENST00000547430 KLHL34Q8N239 644 aa16.62■□□□□ 0.25
HIF1A-205ENST00000547430 DCAF8L2P0C7V8 631 aa16.57■□□□□ 0.24
HIF1A-205ENST00000547430 PLCD3Q8N3E9 789 aa16.55■□□□□ 0.24
HIF1A-205ENST00000547430 CACNB1Q02641 598 aaPredicted RBP16.53■□□□□ 0.24
HIF1A-205ENST00000547430 MIER1Q8N108 512 aa16.48■□□□□ 0.23
HIF1A-205ENST00000547430 ECM2O94769 699 aaPredicted RBP16.45■□□□□ 0.22
HIF1A-205ENST00000547430 ZBTB47Q9UFB7 747 aaPredicted RBP16.35■□□□□ 0.21
HIF1A-205ENST00000547430 PLEKHG5O94827 1062 aa16.34■□□□□ 0.21
HIF1A-205ENST00000547430 HAP1P54257 671 aaPredicted RBP16.34■□□□□ 0.21
HIF1A-205ENST00000547430 RGL2O15211 777 aa16.29■□□□□ 0.2
HIF1A-205ENST00000547430 BBXQ8WY36 941 aaPredicted RBP16.28■□□□□ 0.2
HIF1A-205ENST00000547430 NPM1P06748 294 aaKnown RBP eCLIP16.26■□□□□ 0.19
HIF1A-205ENST00000547430 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.22■□□□□ 0.19
HIF1A-205ENST00000547430 CIZ1Q9ULV3 898 aaPredicted RBP16.21■□□□□ 0.19
HIF1A-205ENST00000547430 RBM42Q9BTD8 480 aaKnown RBP16.17■□□□□ 0.18
HIF1A-205ENST00000547430 VSIG10Q8N0Z9 540 aa16.15■□□□□ 0.18
HIF1A-205ENST00000547430 TRIM41Q8WV44 630 aa16.15■□□□□ 0.18
HIF1A-205ENST00000547430 AKT1S1Q96B36 256 aa16.15■□□□□ 0.18
HIF1A-205ENST00000547430 SPDYE1Q8NFV5 336 aaPredicted RBP16.14■□□□□ 0.17
HIF1A-205ENST00000547430 PAXIP1Q6ZW49 1069 aaPredicted RBP16.1■□□□□ 0.17
HIF1A-205ENST00000547430 NUBP1P53384 320 aa16.06■□□□□ 0.16
HIF1A-205ENST00000547430 GSE1Q14687 1217 aa16.06■□□□□ 0.16
HIF1A-205ENST00000547430 CFAP44Q96MT7 982 aa16.05■□□□□ 0.16
HIF1A-205ENST00000547430 CHGAP10645 457 aaKnown RBP16.02■□□□□ 0.16
HIF1A-205ENST00000547430 CREBZFQ9NS37 354 aa16■□□□□ 0.15
HIF1A-205ENST00000547430 SPRYD3Q8NCJ5 442 aa15.99■□□□□ 0.15
HIF1A-205ENST00000547430 CLEC11AQ9Y240 323 aa15.99■□□□□ 0.15
HIF1A-205ENST00000547430 REM2Q8IYK8 340 aaPredicted RBP15.98■□□□□ 0.15
HIF1A-205ENST00000547430 PRR29P0C7W0 189 aa15.97■□□□□ 0.15
HIF1A-205ENST00000547430 RNF25Q96BH1 459 aaPredicted RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms