RNA–Protein interactions for RNA: ENST00000546873.1

CHPT1-203, Transcript of choline phosphotransferase 1, humanhuman

TSL 3

Gene CHPT1, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-203ENST00000546873 Q96NJ1 140 aa4.03□□□□□ -1.76
CHPT1-203ENST00000546873 CCDC179H3BU77 68 aa4.02□□□□□ -1.77
CHPT1-203ENST00000546873 TNXBP22105 4242 aa4.01□□□□□ -1.77
CHPT1-203ENST00000546873 A0A0U1RQV1 116 aa4.01□□□□□ -1.77
CHPT1-203ENST00000546873 MMP24-AS1A0A0U1RRL7 71 aa4.01□□□□□ -1.77
CHPT1-203ENST00000546873 hDV103S1A0JD37 113 aa4.01□□□□□ -1.77
CHPT1-203ENST00000546873 C8orf17Q9NRJ1 99 aa4.01□□□□□ -1.77
CHPT1-203ENST00000546873 TMEM254Q8TBM7 123 aa4□□□□□ -1.77
CHPT1-203ENST00000546873 MP68P56378 58 aa3.99□□□□□ -1.77
CHPT1-203ENST00000546873 KRTAP10-8P60410 259 aa3.99□□□□□ -1.77
CHPT1-203ENST00000546873 C20orf197Q8N268 126 aa3.99□□□□□ -1.77
CHPT1-203ENST00000546873 TP53AIP1Q9HCN2 124 aa3.99□□□□□ -1.77
CHPT1-203ENST00000546873 MUC2Q02817 5179 aa3.99□□□□□ -1.77
CHPT1-203ENST00000546873 NDUFC1O43677 76 aa3.98□□□□□ -1.77
CHPT1-203ENST00000546873 NDUFS5O43920 106 aa3.98□□□□□ -1.77
CHPT1-203ENST00000546873 C1orf195Q5TG92 126 aa3.98□□□□□ -1.77
CHPT1-203ENST00000546873 MRPL34Q9BQ48 92 aaKnown RBP3.97□□□□□ -1.77
CHPT1-203ENST00000546873 H3BPC8 53 aa3.96□□□□□ -1.78
CHPT1-203ENST00000546873 LINC00313P59037 77 aa3.96□□□□□ -1.78
CHPT1-203ENST00000546873 TMEM258P61165 79 aa3.96□□□□□ -1.78
CHPT1-203ENST00000546873 KLKP1Q107X0 134 aa3.96□□□□□ -1.78
CHPT1-203ENST00000546873 TRAV22A0A0B4J277 110 aa3.95□□□□□ -1.78
CHPT1-203ENST00000546873 H0Y9P7 68 aa3.95□□□□□ -1.78
CHPT1-203ENST00000546873 CRCT1Q9UGL9 99 aa3.95□□□□□ -1.78
CHPT1-203ENST00000546873 FSIP2Q5CZC0 6907 aa3.94□□□□□ -1.78
CHPT1-203ENST00000546873 ATP5EP56381 51 aaPredicted RBP3.94□□□□□ -1.78
CHPT1-203ENST00000546873 SNURFQ9Y675 71 aa3.94□□□□□ -1.78
CHPT1-203ENST00000546873 LPAP08519 4548 aa3.94□□□□□ -1.78
CHPT1-203ENST00000546873 FAM236DA0A1B0GTK5 79 aa3.91□□□□□ -1.78
CHPT1-203ENST00000546873 FAM236CP0DP71 79 aa3.91□□□□□ -1.78
CHPT1-203ENST00000546873 LINC00208Q96KT6 92 aa3.9□□□□□ -1.79
CHPT1-203ENST00000546873 LOC101927531A0A1B0GV80 90 aa3.89□□□□□ -1.79
CHPT1-203ENST00000546873 H7BZZ5 65 aa3.89□□□□□ -1.79
CHPT1-203ENST00000546873 FP248Q71RG6 208 aaPredicted RBP3.89□□□□□ -1.79
CHPT1-203ENST00000546873 C1orf64Q8NEQ6 169 aa3.89□□□□□ -1.79
CHPT1-203ENST00000546873 C4orf26Q17RF5 130 aa3.88□□□□□ -1.79
CHPT1-203ENST00000546873 ZCCHC13Q8WW36 166 aaKnown RBP3.87□□□□□ -1.79
CHPT1-203ENST00000546873 CYSTM1Q9H1C7 97 aa3.87□□□□□ -1.79
CHPT1-203ENST00000546873 RETNLBQ9BQ08 111 aa3.86□□□□□ -1.79
CHPT1-203ENST00000546873 C9orf92A6NGG3 77 aa3.84□□□□□ -1.79
CHPT1-203ENST00000546873 SPANXA2-OT1Q8N9U9 137 aa3.83□□□□□ -1.8
CHPT1-203ENST00000546873 PCOTHQ58A44 107 aa3.82□□□□□ -1.8
CHPT1-203ENST00000546873 Q5W150 140 aa3.82□□□□□ -1.8
CHPT1-203ENST00000546873 SERP1Q9Y6X1 66 aa3.82□□□□□ -1.8
CHPT1-203ENST00000546873 C7orf65Q6ZTY9 151 aa3.81□□□□□ -1.8
CHPT1-203ENST00000546873 C20orf166-AS1Q96NR2 134 aa3.81□□□□□ -1.8
CHPT1-203ENST00000546873 A8MUU9 505 aa3.8□□□□□ -1.8
CHPT1-203ENST00000546873 PRR4Q16378 134 aa3.8□□□□□ -1.8
CHPT1-203ENST00000546873 RPS28P62857 69 aaKnown RBP3.79□□□□□ -1.8
CHPT1-203ENST00000546873 CYP4F30PQ9H0H9 118 aa3.79□□□□□ -1.8
CHPT1-203ENST00000546873 PRO0628Q9UI54 55 aa3.79□□□□□ -1.8
CHPT1-203ENST00000546873 ATP11AUNQ6ZP68 121 aa3.77□□□□□ -1.81
CHPT1-203ENST00000546873 TPRXLQ17RH7 258 aa3.75□□□□□ -1.81
CHPT1-203ENST00000546873 RPL37P61927 97 aaKnown RBP3.74□□□□□ -1.81
CHPT1-203ENST00000546873 KRTAP5-5Q701N2 237 aaPredicted RBP3.74□□□□□ -1.81
CHPT1-203ENST00000546873 HRES1P13985 223 aa3.73□□□□□ -1.81
CHPT1-203ENST00000546873 SMIM26A0A096LP01 95 aa3.72□□□□□ -1.81
CHPT1-203ENST00000546873 A8MUN3 132 aa3.71□□□□□ -1.82
CHPT1-203ENST00000546873 CHKB-CPT1BH3BT56 60 aa3.71□□□□□ -1.82
CHPT1-203ENST00000546873 ACYP2P14621 99 aa3.71□□□□□ -1.82
CHPT1-203ENST00000546873 COA5Q86WW8 74 aa3.71□□□□□ -1.82
CHPT1-203ENST00000546873 DMAC1Q96GE9 116 aa3.71□□□□□ -1.82
CHPT1-203ENST00000546873 SPINK7P58062 85 aa3.69□□□□□ -1.82
CHPT1-203ENST00000546873 KRTAP5-2Q701N4 177 aa3.65□□□□□ -1.83
CHPT1-203ENST00000546873 SPTSSBQ8NFR3 76 aa3.65□□□□□ -1.83
CHPT1-203ENST00000546873 PMAIP1Q13794 54 aa3.64□□□□□ -1.83
CHPT1-203ENST00000546873 MUC17Q685J3 4493 aa3.62□□□□□ -1.83
CHPT1-203ENST00000546873 PSPHP1O15172 72 aa3.62□□□□□ -1.83
CHPT1-203ENST00000546873 COX6B2Q6YFQ2 88 aa3.62□□□□□ -1.83
CHPT1-203ENST00000546873 Q1T7F1 81 aa3.61□□□□□ -1.83
CHPT1-203ENST00000546873 RBM12B-AS1Q9P1G2 102 aa3.61□□□□□ -1.83
CHPT1-203ENST00000546873 LCE1CQ5T751 118 aa3.6□□□□□ -1.83
CHPT1-203ENST00000546873 LCE1BQ5T7P3 118 aa3.6□□□□□ -1.83
CHPT1-203ENST00000546873 PRR15LQ9BU68 103 aa3.6□□□□□ -1.83
CHPT1-203ENST00000546873 LINC01558Q9Y6Z2 57 aa3.56□□□□□ -1.84
CHPT1-203ENST00000546873 S4R3F8 94 aa3.55□□□□□ -1.84
CHPT1-203ENST00000546873 A0A1B0GU69 56 aa3.54□□□□□ -1.84
CHPT1-203ENST00000546873 H1FX-AS1Q4G0G2 97 aa3.53□□□□□ -1.84
CHPT1-203ENST00000546873 KRTAP4-1Q9BYQ7 146 aa3.53□□□□□ -1.84
CHPT1-203ENST00000546873 SYNE2Q8WXH0 6885 aaKnown RBP3.51□□□□□ -1.85
CHPT1-203ENST00000546873 Q5VV11 94 aa3.5□□□□□ -1.85
CHPT1-203ENST00000546873 A6NED7 52 aa3.49□□□□□ -1.85
CHPT1-203ENST00000546873 LCA10Q71F78 164 aa3.48□□□□□ -1.85
CHPT1-203ENST00000546873 BRK1Q8WUW1 75 aa3.48□□□□□ -1.85
CHPT1-203ENST00000546873 MT1HP80294 61 aa3.47□□□□□ -1.85
CHPT1-203ENST00000546873 PP632Q6XCG6 107 aa3.47□□□□□ -1.85
CHPT1-203ENST00000546873 SSPOA2VEC9 5147 aa3.45□□□□□ -1.86
CHPT1-203ENST00000546873 CSAG1Q6PB30 78 aa3.45□□□□□ -1.86
CHPT1-203ENST00000546873 UQCR11O14957 56 aa3.44□□□□□ -1.86
CHPT1-203ENST00000546873 KRTAP19-2Q3LHN2 52 aa3.44□□□□□ -1.86
CHPT1-203ENST00000546873 LCE3DQ9BYE3 92 aa3.42□□□□□ -1.86
CHPT1-203ENST00000546873 CDC42SE1Q9NRR8 79 aa3.42□□□□□ -1.86
CHPT1-203ENST00000546873 FCGBPQ9Y6R7 5405 aaPredicted RBP3.42□□□□□ -1.86
CHPT1-203ENST00000546873 USH2AO75445 5202 aa3.41□□□□□ -1.86
CHPT1-203ENST00000546873 MIR22HGQ0VDD5 57 aa3.4□□□□□ -1.87
CHPT1-203ENST00000546873 MACF1Q9UPN3 7388 aaKnown RBP3.39□□□□□ -1.87
CHPT1-203ENST00000546873 A0A1B0GU33 70 aa3.38□□□□□ -1.87
CHPT1-203ENST00000546873 CAMK2N1Q7Z7J9 78 aa3.37□□□□□ -1.87
CHPT1-203ENST00000546873 H0YAA0 97 aa3.36□□□□□ -1.87
CHPT1-203ENST00000546873 KTN1-AS1Q86SY8 53 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms