RNA–Protein interactions for RNA: ENST00000545717.1

DDX11-230, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 3

Gene DDX11, Length 617 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-230ENST00000545717 CHKB-CPT1BH3BT56 60 aa7.26□□□□□ -1.25
DDX11-230ENST00000545717 KRTAP19-2Q3LHN2 52 aa7.23□□□□□ -1.25
DDX11-230ENST00000545717 LCE2AQ5TA79 106 aaPredicted RBP7.22□□□□□ -1.25
DDX11-230ENST00000545717 SPTSSBQ8NFR3 76 aa7.21□□□□□ -1.26
DDX11-230ENST00000545717 COA5Q86WW8 74 aa7.19□□□□□ -1.26
DDX11-230ENST00000545717 LCE2CQ5TA81 110 aa7.18□□□□□ -1.26
DDX11-230ENST00000545717 LCA10Q71F78 164 aa7.17□□□□□ -1.26
DDX11-230ENST00000545717 M0R2T5 61 aa7.15□□□□□ -1.26
DDX11-230ENST00000545717 CSAG1Q6PB30 78 aa7.13□□□□□ -1.27
DDX11-230ENST00000545717 SERP1Q9Y6X1 66 aa7.13□□□□□ -1.27
DDX11-230ENST00000545717 FLGP20930 4061 aaPredicted RBP7.11□□□□□ -1.27
DDX11-230ENST00000545717 MT1HP80294 61 aa7.11□□□□□ -1.27
DDX11-230ENST00000545717 KRTAP3-3Q9BYR6 98 aa7.05□□□□□ -1.28
DDX11-230ENST00000545717 CRCT1Q9UGL9 99 aa7.01□□□□□ -1.29
DDX11-230ENST00000545717 FSIP2Q5CZC0 6907 aa6.99□□□□□ -1.29
DDX11-230ENST00000545717 RPS28P62857 69 aaKnown RBP6.98□□□□□ -1.29
DDX11-230ENST00000545717 SEC61GP60059 68 aa6.95□□□□□ -1.3
DDX11-230ENST00000545717 H0YAA0 97 aa6.93□□□□□ -1.3
DDX11-230ENST00000545717 KRTAP3-2Q9BYR7 98 aa6.93□□□□□ -1.3
DDX11-230ENST00000545717 SMIM26A0A096LP01 95 aa6.91□□□□□ -1.3
DDX11-230ENST00000545717 KRTAP10-6P60371 365 aaPredicted RBP6.9□□□□□ -1.3
DDX11-230ENST00000545717 V9GYY9 64 aa6.9□□□□□ -1.3
DDX11-230ENST00000545717 ADM2Q7Z4H4 148 aa6.88□□□□□ -1.31
DDX11-230ENST00000545717 PRR15LQ9BU68 103 aa6.88□□□□□ -1.31
DDX11-230ENST00000545717 A0A1B0GU69 56 aa6.86□□□□□ -1.31
DDX11-230ENST00000545717 LORP23490 312 aaPredicted RBP6.84□□□□□ -1.31
DDX11-230ENST00000545717 LINC01558Q9Y6Z2 57 aa6.84□□□□□ -1.31
DDX11-230ENST00000545717 Q1T7F1 81 aa6.81□□□□□ -1.32
DDX11-230ENST00000545717 KRTAP10-10P60014 251 aa6.78□□□□□ -1.32
DDX11-230ENST00000545717 KRTAP9-8Q9BYQ0 159 aa6.78□□□□□ -1.32
DDX11-230ENST00000545717 MT2AP02795 61 aa6.77□□□□□ -1.33
DDX11-230ENST00000545717 CRIPTQ9P021 101 aa6.76□□□□□ -1.33
DDX11-230ENST00000545717 P0C880 135 aa6.73□□□□□ -1.33
DDX11-230ENST00000545717 MT1FP04733 61 aa6.71□□□□□ -1.34
DDX11-230ENST00000545717 R4GN34 69 aa6.7□□□□□ -1.34
DDX11-230ENST00000545717 A0A1B0GU33 70 aa6.69□□□□□ -1.34
DDX11-230ENST00000545717 PSPHP1O15172 72 aa6.68□□□□□ -1.34
DDX11-230ENST00000545717 M0QZ58 72 aa6.66□□□□□ -1.34
DDX11-230ENST00000545717 KRTAP9-7A8MTY7 169 aa6.62□□□□□ -1.35
DDX11-230ENST00000545717 UQCR11O14957 56 aa6.61□□□□□ -1.35
DDX11-230ENST00000545717 Q5VV11 94 aa6.6□□□□□ -1.35
DDX11-230ENST00000545717 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.56□□□□□ -1.36
DDX11-230ENST00000545717 SPRR2GQ9BYE4 73 aa6.56□□□□□ -1.36
DDX11-230ENST00000545717 KRTAP9-3Q9BYQ3 159 aa6.55□□□□□ -1.36
DDX11-230ENST00000545717 A6NED7 52 aa6.54□□□□□ -1.36
DDX11-230ENST00000545717 LINC01554Q52M75 96 aa6.53□□□□□ -1.36
DDX11-230ENST00000545717 SPATA8Q6RVD6 105 aa6.52□□□□□ -1.37
DDX11-230ENST00000545717 MIR22HGQ0VDD5 57 aa6.5□□□□□ -1.37
DDX11-230ENST00000545717 KRTAP13-4Q3LI77 160 aa6.5□□□□□ -1.37
DDX11-230ENST00000545717 KRTAP19-1Q8IUB9 90 aa6.5□□□□□ -1.37
DDX11-230ENST00000545717 A0A0D9SG42 100 aa6.45□□□□□ -1.38
DDX11-230ENST00000545717 A6NN06 94 aa6.43□□□□□ -1.38
DDX11-230ENST00000545717 KRTAP19-8Q3LI54 63 aa6.41□□□□□ -1.38
DDX11-230ENST00000545717 PLAC4Q8WY50 150 aa6.41□□□□□ -1.38
DDX11-230ENST00000545717 A8MU10 97 aa6.38□□□□□ -1.39
DDX11-230ENST00000545717 LCE2BO14633 110 aa6.38□□□□□ -1.39
DDX11-230ENST00000545717 SSPOA2VEC9 5147 aa6.38□□□□□ -1.39
DDX11-230ENST00000545717 CDC42SE1Q9NRR8 79 aa6.37□□□□□ -1.39
DDX11-230ENST00000545717 K7ERS5 55 aa6.36□□□□□ -1.39
DDX11-230ENST00000545717 SPINT4Q6UDR6 99 aa6.35□□□□□ -1.39
DDX11-230ENST00000545717 USH2AO75445 5202 aa6.35□□□□□ -1.39
DDX11-230ENST00000545717 MT1BP07438 61 aa6.3□□□□□ -1.4
DDX11-230ENST00000545717 FCGBPQ9Y6R7 5405 aaPredicted RBP6.29□□□□□ -1.4
DDX11-230ENST00000545717 KRTAP12-1P59990 96 aa6.29□□□□□ -1.4
DDX11-230ENST00000545717 BRK1Q8WUW1 75 aa6.29□□□□□ -1.4
DDX11-230ENST00000545717 CAMK2N1Q7Z7J9 78 aa6.27□□□□□ -1.41
DDX11-230ENST00000545717 KRTAP12-2P59991 146 aa6.25□□□□□ -1.41
DDX11-230ENST00000545717 PRO2289Q9P1D8 64 aa6.2□□□□□ -1.42
DDX11-230ENST00000545717 SYNE2Q8WXH0 6885 aaKnown RBP6.18□□□□□ -1.42
DDX11-230ENST00000545717 MACF1Q9UPN3 7388 aaKnown RBP6.16□□□□□ -1.42
DDX11-230ENST00000545717 KRTAP19-6Q3LI70 58 aa6.11□□□□□ -1.43
DDX11-230ENST00000545717 KRTAP10-5P60370 271 aa6.08□□□□□ -1.44
DDX11-230ENST00000545717 MT1XP80297 61 aa6.06□□□□□ -1.44
DDX11-230ENST00000545717 PRO0628Q9UI54 55 aa6.03□□□□□ -1.44
DDX11-230ENST00000545717 ROMO1P60602 79 aa5.96□□□□□ -1.46
DDX11-230ENST00000545717 SVIPQ8NHG7 77 aa5.96□□□□□ -1.46
DDX11-230ENST00000545717 KRTAP6-3Q3LI67 103 aa5.95□□□□□ -1.46
DDX11-230ENST00000545717 PMAIP1Q13794 54 aa5.94□□□□□ -1.46
DDX11-230ENST00000545717 C10orf95Q9H7T3 257 aa5.94□□□□□ -1.46
DDX11-230ENST00000545717 TNP1P09430 55 aa5.92□□□□□ -1.46
DDX11-230ENST00000545717 NEBP20929 6669 aa5.87□□□□□ -1.47
DDX11-230ENST00000545717 KRTAP25-1Q3LHN0 102 aa5.87□□□□□ -1.47
DDX11-230ENST00000545717 KRTAP10-7P60409 375 aaPredicted RBP5.79□□□□□ -1.48
DDX11-230ENST00000545717 KRTAP10-12P60413 245 aa5.78□□□□□ -1.48
DDX11-230ENST00000545717 KRTAP20-1Q3LI63 56 aa5.76□□□□□ -1.49
DDX11-230ENST00000545717 MUC12Q9UKN1 5478 aa5.75□□□□□ -1.49
DDX11-230ENST00000545717 KRTAP23-1A1A580 65 aa5.67□□□□□ -1.5
DDX11-230ENST00000545717 PP632Q6XCG6 107 aa5.65□□□□□ -1.5
DDX11-230ENST00000545717 KTN1-AS1Q86SY8 53 aa5.63□□□□□ -1.51
DDX11-230ENST00000545717 LCE3AQ5TA76 89 aa5.62□□□□□ -1.51
DDX11-230ENST00000545717 KRTAP8-1Q8IUC2 63 aa5.62□□□□□ -1.51
DDX11-230ENST00000545717 KRTAP4-8A0A0G2JLE6 195 aa5.58□□□□□ -1.52
DDX11-230ENST00000545717 KRTAP4-8Q9BYQ9 185 aa5.58□□□□□ -1.52
DDX11-230ENST00000545717 MDN1Q9NU22 5596 aa5.51□□□□□ -1.53
DDX11-230ENST00000545717 PRAC1Q96KF2 57 aa5.5□□□□□ -1.53
DDX11-230ENST00000545717 LOC100996750A0A140TA64 210 aa5.48□□□□□ -1.53
DDX11-230ENST00000545717 KRTAP4-6Q9BYQ5 205 aa5.48□□□□□ -1.53
DDX11-230ENST00000545717 KRTAP2-3P0C7H8 128 aa5.47□□□□□ -1.53
DDX11-230ENST00000545717 KRTAP2-4Q9BYR9 128 aa5.47□□□□□ -1.53
DDX11-230ENST00000545717 KMT2DO14686 5537 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms