RNA–Protein interactions for RNA: ENST00000545368.5

CDCA3-210, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 619 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-210ENST00000545368 DMAC1Q96GE9 116 aa6.32□□□□□ -1.4
CDCA3-210ENST00000545368 NDUFC1O43677 76 aa6.31□□□□□ -1.4
CDCA3-210ENST00000545368 KRTAP10-6P60371 365 aaPredicted RBP6.3□□□□□ -1.4
CDCA3-210ENST00000545368 SPANXA2-OT1Q8N9U9 137 aa6.3□□□□□ -1.4
CDCA3-210ENST00000545368 LCA10Q71F78 164 aa6.29□□□□□ -1.4
CDCA3-210ENST00000545368 CCDC179H3BU77 68 aa6.26□□□□□ -1.41
CDCA3-210ENST00000545368 ACYP2P14621 99 aa6.26□□□□□ -1.41
CDCA3-210ENST00000545368 H7BZZ5 65 aa6.24□□□□□ -1.41
CDCA3-210ENST00000545368 CSAG1Q6PB30 78 aa6.24□□□□□ -1.41
CDCA3-210ENST00000545368 CYSTM1Q9H1C7 97 aa6.23□□□□□ -1.41
CDCA3-210ENST00000545368 PCP4P48539 62 aa6.22□□□□□ -1.41
CDCA3-210ENST00000545368 CHKB-CPT1BH3BT56 60 aa6.18□□□□□ -1.42
CDCA3-210ENST00000545368 KRTAP9-8Q9BYQ0 159 aa6.16□□□□□ -1.42
CDCA3-210ENST00000545368 MT2AP02795 61 aa6.14□□□□□ -1.43
CDCA3-210ENST00000545368 SPTSSBQ8NFR3 76 aa6.14□□□□□ -1.43
CDCA3-210ENST00000545368 ATP5EP56381 51 aaPredicted RBP6.12□□□□□ -1.43
CDCA3-210ENST00000545368 KRTAP10-10P60014 251 aa6.1□□□□□ -1.43
CDCA3-210ENST00000545368 COA5Q86WW8 74 aa6.1□□□□□ -1.43
CDCA3-210ENST00000545368 MT1FP04733 61 aa6.09□□□□□ -1.43
CDCA3-210ENST00000545368 TMEM258P61165 79 aa6.09□□□□□ -1.43
CDCA3-210ENST00000545368 H0YAA0 97 aa6.06□□□□□ -1.44
CDCA3-210ENST00000545368 KRTAP23-1A1A580 65 aa6.05□□□□□ -1.44
CDCA3-210ENST00000545368 ADM2Q7Z4H4 148 aa6.01□□□□□ -1.45
CDCA3-210ENST00000545368 KRTAP9-3Q9BYQ3 159 aa5.96□□□□□ -1.46
CDCA3-210ENST00000545368 KRTAP9-2Q9BYQ4 174 aa5.96□□□□□ -1.46
CDCA3-210ENST00000545368 CRIPTQ9P021 101 aa5.93□□□□□ -1.46
CDCA3-210ENST00000545368 P0C880 135 aa5.9□□□□□ -1.46
CDCA3-210ENST00000545368 SEC61GP60059 68 aa5.89□□□□□ -1.47
CDCA3-210ENST00000545368 SERP1Q9Y6X1 66 aa5.89□□□□□ -1.47
CDCA3-210ENST00000545368 A0A0A0MQY5 61 aa5.88□□□□□ -1.47
CDCA3-210ENST00000545368 KRTAP19-1Q8IUB9 90 aa5.85□□□□□ -1.47
CDCA3-210ENST00000545368 SPRR2GQ9BYE4 73 aa5.85□□□□□ -1.47
CDCA3-210ENST00000545368 R4GN34 69 aa5.85□□□□□ -1.47
CDCA3-210ENST00000545368 M0QZ58 72 aa5.82□□□□□ -1.48
CDCA3-210ENST00000545368 A0A1B0GU69 56 aa5.8□□□□□ -1.48
CDCA3-210ENST00000545368 PRR15LQ9BU68 103 aa5.77□□□□□ -1.49
CDCA3-210ENST00000545368 USH2AO75445 5202 aa5.76□□□□□ -1.49
CDCA3-210ENST00000545368 Q5VV11 94 aa5.76□□□□□ -1.49
CDCA3-210ENST00000545368 FSIP2Q5CZC0 6907 aa5.76□□□□□ -1.49
CDCA3-210ENST00000545368 KRTAP19-8Q3LI54 63 aa5.75□□□□□ -1.49
CDCA3-210ENST00000545368 LINC01558Q9Y6Z2 57 aa5.75□□□□□ -1.49
CDCA3-210ENST00000545368 A0A1B0GU33 70 aa5.72□□□□□ -1.49
CDCA3-210ENST00000545368 LINC01554Q52M75 96 aa5.71□□□□□ -1.5
CDCA3-210ENST00000545368 RPS28P62857 69 aaKnown RBP5.7□□□□□ -1.5
CDCA3-210ENST00000545368 CRCT1Q9UGL9 99 aa5.7□□□□□ -1.5
CDCA3-210ENST00000545368 V9GYY9 64 aa5.7□□□□□ -1.5
CDCA3-210ENST00000545368 SMIM26A0A096LP01 95 aa5.68□□□□□ -1.5
CDCA3-210ENST00000545368 MT1BP07438 61 aa5.68□□□□□ -1.5
CDCA3-210ENST00000545368 KRTAP13-4Q3LI77 160 aa5.66□□□□□ -1.5
CDCA3-210ENST00000545368 Q1T7F1 81 aa5.64□□□□□ -1.51
CDCA3-210ENST00000545368 PLAC4Q8WY50 150 aa5.64□□□□□ -1.51
CDCA3-210ENST00000545368 KRTAP9-6A0A140TA67 174 aa5.63□□□□□ -1.51
CDCA3-210ENST00000545368 SSPOA2VEC9 5147 aa5.62□□□□□ -1.51
CDCA3-210ENST00000545368 SPATA8Q6RVD6 105 aa5.62□□□□□ -1.51
CDCA3-210ENST00000545368 KRTAP19-4Q3LI73 84 aa5.61□□□□□ -1.51
CDCA3-210ENST00000545368 A6NN06 94 aa5.59□□□□□ -1.51
CDCA3-210ENST00000545368 KRTAP19-6Q3LI70 58 aa5.59□□□□□ -1.51
CDCA3-210ENST00000545368 A0A0D9SG42 100 aa5.57□□□□□ -1.52
CDCA3-210ENST00000545368 PSPHP1O15172 72 aa5.57□□□□□ -1.52
CDCA3-210ENST00000545368 UQCR11O14957 56 aa5.56□□□□□ -1.52
CDCA3-210ENST00000545368 KRTAP10-5P60370 271 aa5.49□□□□□ -1.53
CDCA3-210ENST00000545368 PRO2289Q9P1D8 64 aa5.49□□□□□ -1.53
CDCA3-210ENST00000545368 A8MU10 97 aa5.48□□□□□ -1.53
CDCA3-210ENST00000545368 SPINT4Q6UDR6 99 aa5.48□□□□□ -1.53
CDCA3-210ENST00000545368 MIR22HGQ0VDD5 57 aa5.47□□□□□ -1.53
CDCA3-210ENST00000545368 FCGBPQ9Y6R7 5405 aaPredicted RBP5.45□□□□□ -1.54
CDCA3-210ENST00000545368 CAMK2N1Q7Z7J9 78 aa5.45□□□□□ -1.54
CDCA3-210ENST00000545368 KRTAP12-1P59990 96 aa5.44□□□□□ -1.54
CDCA3-210ENST00000545368 A6NED7 52 aa5.43□□□□□ -1.54
CDCA3-210ENST00000545368 MT1XP80297 61 aa5.42□□□□□ -1.54
CDCA3-210ENST00000545368 KRTAP12-2P59991 146 aa5.41□□□□□ -1.54
CDCA3-210ENST00000545368 K7ERS5 55 aa5.33□□□□□ -1.56
CDCA3-210ENST00000545368 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.28□□□□□ -1.56
CDCA3-210ENST00000545368 CDC42SE1Q9NRR8 79 aa5.26□□□□□ -1.57
CDCA3-210ENST00000545368 MACF1Q9UPN3 7388 aaKnown RBP5.25□□□□□ -1.57
CDCA3-210ENST00000545368 KRTAP10-7P60409 375 aaPredicted RBP5.19□□□□□ -1.58
CDCA3-210ENST00000545368 SYNE2Q8WXH0 6885 aaKnown RBP5.17□□□□□ -1.58
CDCA3-210ENST00000545368 KRTAP10-12P60413 245 aa5.16□□□□□ -1.58
CDCA3-210ENST00000545368 C10orf95Q9H7T3 257 aa5.16□□□□□ -1.58
CDCA3-210ENST00000545368 TNP1P09430 55 aa5.12□□□□□ -1.59
CDCA3-210ENST00000545368 KRTAP9-7A8MTY7 169 aa5.11□□□□□ -1.59
CDCA3-210ENST00000545368 KRTAP15-1Q3LI76 137 aa5.11□□□□□ -1.59
CDCA3-210ENST00000545368 BRK1Q8WUW1 75 aa5.1□□□□□ -1.59
CDCA3-210ENST00000545368 KRTAP6-3Q3LI67 103 aa5.07□□□□□ -1.6
CDCA3-210ENST00000545368 KRTAP8-1Q8IUC2 63 aa5.07□□□□□ -1.6
CDCA3-210ENST00000545368 KRTAP4-8A0A0G2JLE6 195 aa5.05□□□□□ -1.6
CDCA3-210ENST00000545368 KRTAP4-8Q9BYQ9 185 aa5.05□□□□□ -1.6
CDCA3-210ENST00000545368 KMT2DO14686 5537 aa5.04□□□□□ -1.6
CDCA3-210ENST00000545368 LOC100996750A0A140TA64 210 aa5.01□□□□□ -1.61
CDCA3-210ENST00000545368 KRTAP25-1Q3LHN0 102 aa5.01□□□□□ -1.61
CDCA3-210ENST00000545368 KRTAP4-6Q9BYQ5 205 aa5.01□□□□□ -1.61
CDCA3-210ENST00000545368 ROMO1P60602 79 aa5□□□□□ -1.61
CDCA3-210ENST00000545368 KRTAP5-9P26371 169 aa4.99□□□□□ -1.61
CDCA3-210ENST00000545368 LCE4AQ5TA78 99 aa4.96□□□□□ -1.62
CDCA3-210ENST00000545368 SPRR2FQ96RM1 72 aa4.96□□□□□ -1.62
CDCA3-210ENST00000545368 KRTAP4-12Q9BQ66 201 aa4.94□□□□□ -1.62
CDCA3-210ENST00000545368 LCE3AQ5TA76 89 aa4.92□□□□□ -1.62
CDCA3-210ENST00000545368 KRTAP9-4Q9BYQ2 154 aa4.92□□□□□ -1.62
CDCA3-210ENST00000545368 KRTAP9-9Q9BYP9 154 aa4.86□□□□□ -1.63
CDCA3-210ENST00000545368 PRAC1Q96KF2 57 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms