RNA–Protein interactions for RNA: ENST00000542694.2

SPTB-205, Transcript of spectrin beta, erythrocytic, humanhuman

TSL 1 (best)

Gene SPTB, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-205ENST00000542694 CSAG1Q6PB30 78 aa7.38□□□□□ -1.23
SPTB-205ENST00000542694 KRTAP9-3Q9BYQ3 159 aa7.36□□□□□ -1.23
SPTB-205ENST00000542694 OCR1Q9BZK8 76 aa7.36□□□□□ -1.23
SPTB-205ENST00000542694 H3BPC8 53 aa7.34□□□□□ -1.23
SPTB-205ENST00000542694 LINC00208Q96KT6 92 aa7.34□□□□□ -1.23
SPTB-205ENST00000542694 A8MUN3 132 aa7.3□□□□□ -1.24
SPTB-205ENST00000542694 LCA10Q71F78 164 aa7.3□□□□□ -1.24
SPTB-205ENST00000542694 SERP2Q8N6R1 65 aa7.29□□□□□ -1.24
SPTB-205ENST00000542694 SMIM20Q8N5G0 67 aa7.28□□□□□ -1.24
SPTB-205ENST00000542694 TRAV7A0A075B6U4 112 aa7.27□□□□□ -1.25
SPTB-205ENST00000542694 COX7CP15954 63 aa7.27□□□□□ -1.25
SPTB-205ENST00000542694 CCDC179H3BU77 68 aa7.26□□□□□ -1.25
SPTB-205ENST00000542694 NDUFC1O43677 76 aa7.23□□□□□ -1.25
SPTB-205ENST00000542694 KLKP1Q107X0 134 aa7.21□□□□□ -1.26
SPTB-205ENST00000542694 USH2AO75445 5202 aa7.16□□□□□ -1.26
SPTB-205ENST00000542694 C20orf197Q8N268 126 aa7.15□□□□□ -1.26
SPTB-205ENST00000542694 CYSTM1Q9H1C7 97 aa7.1□□□□□ -1.27
SPTB-205ENST00000542694 CRIPTQ9P021 101 aa7.1□□□□□ -1.27
SPTB-205ENST00000542694 SNURFQ9Y675 71 aa7.1□□□□□ -1.27
SPTB-205ENST00000542694 H0YAA0 97 aa7.09□□□□□ -1.27
SPTB-205ENST00000542694 DMAC1Q96GE9 116 aa7.08□□□□□ -1.28
SPTB-205ENST00000542694 KRTAP19-1Q8IUB9 90 aa7.07□□□□□ -1.28
SPTB-205ENST00000542694 KRTAP9-7A8MTY7 169 aa7.05□□□□□ -1.28
SPTB-205ENST00000542694 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.05□□□□□ -1.28
SPTB-205ENST00000542694 SSPOA2VEC9 5147 aa7.04□□□□□ -1.28
SPTB-205ENST00000542694 KRTAP19-6Q3LI70 58 aa7.03□□□□□ -1.28
SPTB-205ENST00000542694 SPRR2GQ9BYE4 73 aa7.03□□□□□ -1.28
SPTB-205ENST00000542694 ACYP2P14621 99 aa7.02□□□□□ -1.29
SPTB-205ENST00000542694 H7BZZ5 65 aa7.01□□□□□ -1.29
SPTB-205ENST00000542694 Q5VV11 94 aa6.99□□□□□ -1.29
SPTB-205ENST00000542694 KRTAP23-1A1A580 65 aa6.98□□□□□ -1.29
SPTB-205ENST00000542694 TMEM258P61165 79 aa6.97□□□□□ -1.29
SPTB-205ENST00000542694 ADM2Q7Z4H4 148 aa6.97□□□□□ -1.29
SPTB-205ENST00000542694 SPTSSBQ8NFR3 76 aa6.96□□□□□ -1.3
SPTB-205ENST00000542694 KRTAP19-8Q3LI54 63 aa6.95□□□□□ -1.3
SPTB-205ENST00000542694 FCGBPQ9Y6R7 5405 aaPredicted RBP6.93□□□□□ -1.3
SPTB-205ENST00000542694 SEC61GP60059 68 aa6.9□□□□□ -1.3
SPTB-205ENST00000542694 SPANXA2-OT1Q8N9U9 137 aa6.9□□□□□ -1.3
SPTB-205ENST00000542694 CHKB-CPT1BH3BT56 60 aa6.88□□□□□ -1.31
SPTB-205ENST00000542694 MT1BP07438 61 aa6.86□□□□□ -1.31
SPTB-205ENST00000542694 ATP5EP56381 51 aaPredicted RBP6.86□□□□□ -1.31
SPTB-205ENST00000542694 R4GN34 69 aa6.83□□□□□ -1.32
SPTB-205ENST00000542694 A6NN06 94 aa6.82□□□□□ -1.32
SPTB-205ENST00000542694 P0C880 135 aa6.78□□□□□ -1.32
SPTB-205ENST00000542694 RPS28P62857 69 aaKnown RBP6.76□□□□□ -1.33
SPTB-205ENST00000542694 SERP1Q9Y6X1 66 aa6.76□□□□□ -1.33
SPTB-205ENST00000542694 M0QZ58 72 aa6.74□□□□□ -1.33
SPTB-205ENST00000542694 PLAC4Q8WY50 150 aa6.74□□□□□ -1.33
SPTB-205ENST00000542694 KRTAP10-5P60370 271 aa6.73□□□□□ -1.33
SPTB-205ENST00000542694 SYNE2Q8WXH0 6885 aaKnown RBP6.71□□□□□ -1.34
SPTB-205ENST00000542694 MACF1Q9UPN3 7388 aaKnown RBP6.71□□□□□ -1.34
SPTB-205ENST00000542694 PRO2289Q9P1D8 64 aa6.67□□□□□ -1.34
SPTB-205ENST00000542694 COA5Q86WW8 74 aa6.64□□□□□ -1.35
SPTB-205ENST00000542694 LINC01554Q52M75 96 aa6.62□□□□□ -1.35
SPTB-205ENST00000542694 SMIM26A0A096LP01 95 aa6.59□□□□□ -1.35
SPTB-205ENST00000542694 KRTAP6-3Q3LI67 103 aa6.58□□□□□ -1.36
SPTB-205ENST00000542694 MT1XP80297 61 aa6.49□□□□□ -1.37
SPTB-205ENST00000542694 Q1T7F1 81 aa6.45□□□□□ -1.38
SPTB-205ENST00000542694 V9GYY9 64 aa6.42□□□□□ -1.38
SPTB-205ENST00000542694 LINC01558Q9Y6Z2 57 aa6.39□□□□□ -1.39
SPTB-205ENST00000542694 A0A1B0GU33 70 aa6.38□□□□□ -1.39
SPTB-205ENST00000542694 KRTAP12-2P59991 146 aa6.38□□□□□ -1.39
SPTB-205ENST00000542694 A0A1B0GU69 56 aa6.36□□□□□ -1.39
SPTB-205ENST00000542694 KRTAP13-4Q3LI77 160 aa6.36□□□□□ -1.39
SPTB-205ENST00000542694 NEBP20929 6669 aa6.35□□□□□ -1.39
SPTB-205ENST00000542694 PSPHP1O15172 72 aa6.34□□□□□ -1.39
SPTB-205ENST00000542694 KRTAP5-9P26371 169 aa6.33□□□□□ -1.4
SPTB-205ENST00000542694 PRR15LQ9BU68 103 aa6.33□□□□□ -1.4
SPTB-205ENST00000542694 CAMK2N1Q7Z7J9 78 aa6.32□□□□□ -1.4
SPTB-205ENST00000542694 A0A0D9SG42 100 aa6.26□□□□□ -1.41
SPTB-205ENST00000542694 SPATA8Q6RVD6 105 aa6.26□□□□□ -1.41
SPTB-205ENST00000542694 KRTAP8-1Q8IUC2 63 aa6.25□□□□□ -1.41
SPTB-205ENST00000542694 MUC12Q9UKN1 5478 aa6.22□□□□□ -1.41
SPTB-205ENST00000542694 KRTAP10-12P60413 245 aa6.21□□□□□ -1.42
SPTB-205ENST00000542694 SPINT4Q6UDR6 99 aa6.2□□□□□ -1.42
SPTB-205ENST00000542694 SPRR2FQ96RM1 72 aa6.19□□□□□ -1.42
SPTB-205ENST00000542694 KRTAP10-7P60409 375 aaPredicted RBP6.18□□□□□ -1.42
SPTB-205ENST00000542694 KMT2DO14686 5537 aa6.15□□□□□ -1.42
SPTB-205ENST00000542694 PRAC1Q96KF2 57 aa6.15□□□□□ -1.42
SPTB-205ENST00000542694 A6NED7 52 aa6.14□□□□□ -1.43
SPTB-205ENST00000542694 KRTAP12-1P59990 96 aa6.13□□□□□ -1.43
SPTB-205ENST00000542694 KRTAP4-8A0A0G2JLE6 195 aa6.12□□□□□ -1.43
SPTB-205ENST00000542694 KRTAP4-8Q9BYQ9 185 aa6.12□□□□□ -1.43
SPTB-205ENST00000542694 KRTAP20-1Q3LI63 56 aa6.11□□□□□ -1.43
SPTB-205ENST00000542694 BRK1Q8WUW1 75 aa6.09□□□□□ -1.43
SPTB-205ENST00000542694 UQCR11O14957 56 aa6.08□□□□□ -1.44
SPTB-205ENST00000542694 SPRR2EP22531 72 aa6.06□□□□□ -1.44
SPTB-205ENST00000542694 SPRR2BP35325 72 aa6.06□□□□□ -1.44
SPTB-205ENST00000542694 SPRR2AP35326 72 aa6.06□□□□□ -1.44
SPTB-205ENST00000542694 A8MU10 97 aa6.04□□□□□ -1.44
SPTB-205ENST00000542694 CDC42SE1Q9NRR8 79 aa6.04□□□□□ -1.44
SPTB-205ENST00000542694 MDN1Q9NU22 5596 aa6.04□□□□□ -1.44
SPTB-205ENST00000542694 MIR22HGQ0VDD5 57 aa6.02□□□□□ -1.45
SPTB-205ENST00000542694 LCE1AQ5T7P2 110 aa5.98□□□□□ -1.45
SPTB-205ENST00000542694 PRO0628Q9UI54 55 aa5.96□□□□□ -1.46
SPTB-205ENST00000542694 KRTAP2-3P0C7H8 128 aa5.93□□□□□ -1.46
SPTB-205ENST00000542694 KRTAP2-4Q9BYR9 128 aa5.93□□□□□ -1.46
SPTB-205ENST00000542694 KRTAP19-4Q3LI73 84 aa5.9□□□□□ -1.46
SPTB-205ENST00000542694 TNP1P09430 55 aa5.89□□□□□ -1.47
SPTB-205ENST00000542694 K7ERS5 55 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms