RNA–Protein interactions for RNA: ENST00000542242.1

DDX11-219, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 795 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-219ENST00000542242 COA5Q86WW8 74 aa7.63□□□□□ -1.19
DDX11-219ENST00000542242 ACYP2P14621 99 aa7.62□□□□□ -1.19
DDX11-219ENST00000542242 C4orf26Q17RF5 130 aa7.61□□□□□ -1.19
DDX11-219ENST00000542242 KRTAP4-1Q9BYQ7 146 aa7.58□□□□□ -1.2
DDX11-219ENST00000542242 SMIM26A0A096LP01 95 aa7.57□□□□□ -1.2
DDX11-219ENST00000542242 SEC61BP60468 96 aaKnown RBP7.57□□□□□ -1.2
DDX11-219ENST00000542242 A8MUN3 132 aa7.56□□□□□ -1.2
DDX11-219ENST00000542242 CRCT1Q9UGL9 99 aa7.55□□□□□ -1.2
DDX11-219ENST00000542242 KRTAP19-4Q3LI73 84 aa7.54□□□□□ -1.2
DDX11-219ENST00000542242 COX6B2Q6YFQ2 88 aa7.53□□□□□ -1.2
DDX11-219ENST00000542242 CHKB-CPT1BH3BT56 60 aa7.52□□□□□ -1.21
DDX11-219ENST00000542242 KRTAP3-1Q9BYR8 98 aa7.49□□□□□ -1.21
DDX11-219ENST00000542242 A0A0A0MQY5 61 aa7.47□□□□□ -1.21
DDX11-219ENST00000542242 MPLKIPQ8TAP9 179 aa7.44□□□□□ -1.22
DDX11-219ENST00000542242 KRTAP19-2Q3LHN2 52 aa7.41□□□□□ -1.22
DDX11-219ENST00000542242 Q1T7F1 81 aa7.4□□□□□ -1.22
DDX11-219ENST00000542242 RBM12B-AS1Q9P1G2 102 aa7.4□□□□□ -1.22
DDX11-219ENST00000542242 V9GYY9 64 aa7.39□□□□□ -1.23
DDX11-219ENST00000542242 SPTSSBQ8NFR3 76 aa7.36□□□□□ -1.23
DDX11-219ENST00000542242 H1FX-AS1Q4G0G2 97 aa7.34□□□□□ -1.23
DDX11-219ENST00000542242 LINC01558Q9Y6Z2 57 aa7.33□□□□□ -1.24
DDX11-219ENST00000542242 FLGP20930 4061 aaPredicted RBP7.32□□□□□ -1.24
DDX11-219ENST00000542242 FSIP2Q5CZC0 6907 aa7.32□□□□□ -1.24
DDX11-219ENST00000542242 S4R3F8 94 aa7.3□□□□□ -1.24
DDX11-219ENST00000542242 PRR15LQ9BU68 103 aa7.29□□□□□ -1.24
DDX11-219ENST00000542242 PSPHP1O15172 72 aa7.28□□□□□ -1.24
DDX11-219ENST00000542242 LCA10Q71F78 164 aa7.26□□□□□ -1.25
DDX11-219ENST00000542242 Q5VV11 94 aa7.21□□□□□ -1.26
DDX11-219ENST00000542242 A0A1B0GU69 56 aa7.2□□□□□ -1.26
DDX11-219ENST00000542242 MT1HP80294 61 aa7.2□□□□□ -1.26
DDX11-219ENST00000542242 SEC61GP60059 68 aa7.16□□□□□ -1.26
DDX11-219ENST00000542242 KRTAP9-7A8MTY7 169 aa7.13□□□□□ -1.27
DDX11-219ENST00000542242 CSAG1Q6PB30 78 aa7.12□□□□□ -1.27
DDX11-219ENST00000542242 A6NED7 52 aa7.07□□□□□ -1.28
DDX11-219ENST00000542242 KRTAP10-6P60371 365 aaPredicted RBP7.02□□□□□ -1.29
DDX11-219ENST00000542242 BRK1Q8WUW1 75 aa7.01□□□□□ -1.29
DDX11-219ENST00000542242 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.99□□□□□ -1.29
DDX11-219ENST00000542242 UQCR11O14957 56 aa6.98□□□□□ -1.29
DDX11-219ENST00000542242 ADM2Q7Z4H4 148 aa6.98□□□□□ -1.29
DDX11-219ENST00000542242 PRO0628Q9UI54 55 aa6.98□□□□□ -1.29
DDX11-219ENST00000542242 A0A1B0GU33 70 aa6.97□□□□□ -1.29
DDX11-219ENST00000542242 M0R2T5 61 aa6.97□□□□□ -1.29
DDX11-219ENST00000542242 LOC100996750A0A140TA64 210 aa6.96□□□□□ -1.3
DDX11-219ENST00000542242 KRTAP4-6Q9BYQ5 205 aa6.96□□□□□ -1.3
DDX11-219ENST00000542242 H0YAA0 97 aa6.95□□□□□ -1.3
DDX11-219ENST00000542242 P0C880 135 aa6.93□□□□□ -1.3
DDX11-219ENST00000542242 CDC42SE1Q9NRR8 79 aa6.93□□□□□ -1.3
DDX11-219ENST00000542242 MIR22HGQ0VDD5 57 aa6.92□□□□□ -1.3
DDX11-219ENST00000542242 SPATA8Q6RVD6 105 aa6.9□□□□□ -1.3
DDX11-219ENST00000542242 KRTAP9-8Q9BYQ0 159 aa6.89□□□□□ -1.31
DDX11-219ENST00000542242 A8MU10 97 aa6.88□□□□□ -1.31
DDX11-219ENST00000542242 KRTAP19-1Q8IUB9 90 aa6.88□□□□□ -1.31
DDX11-219ENST00000542242 KRTAP13-4Q3LI77 160 aa6.79□□□□□ -1.32
DDX11-219ENST00000542242 MT2AP02795 61 aa6.77□□□□□ -1.33
DDX11-219ENST00000542242 KRTAP15-1Q3LI76 137 aa6.77□□□□□ -1.33
DDX11-219ENST00000542242 M0QZ58 72 aa6.76□□□□□ -1.33
DDX11-219ENST00000542242 KRTAP4-12Q9BQ66 201 aa6.74□□□□□ -1.33
DDX11-219ENST00000542242 MT1FP04733 61 aa6.72□□□□□ -1.33
DDX11-219ENST00000542242 R4GN34 69 aa6.72□□□□□ -1.33
DDX11-219ENST00000542242 A0A0D9SG42 100 aa6.71□□□□□ -1.34
DDX11-219ENST00000542242 KRTAP4-8Q9BYQ9 185 aa6.71□□□□□ -1.34
DDX11-219ENST00000542242 LCE4AQ5TA78 99 aa6.7□□□□□ -1.34
DDX11-219ENST00000542242 KRTAP9-3Q9BYQ3 159 aa6.66□□□□□ -1.34
DDX11-219ENST00000542242 CRIPTQ9P021 101 aa6.65□□□□□ -1.34
DDX11-219ENST00000542242 K7ERS5 55 aa6.62□□□□□ -1.35
DDX11-219ENST00000542242 PMAIP1Q13794 54 aa6.62□□□□□ -1.35
DDX11-219ENST00000542242 USH2AO75445 5202 aa6.61□□□□□ -1.35
DDX11-219ENST00000542242 LINC01554Q52M75 96 aa6.61□□□□□ -1.35
DDX11-219ENST00000542242 SSPOA2VEC9 5147 aa6.58□□□□□ -1.36
DDX11-219ENST00000542242 A6NN06 94 aa6.58□□□□□ -1.36
DDX11-219ENST00000542242 KRTAP10-10P60014 251 aa6.58□□□□□ -1.36
DDX11-219ENST00000542242 KRTAP12-1P59990 96 aa6.55□□□□□ -1.36
DDX11-219ENST00000542242 SPINT4Q6UDR6 99 aa6.55□□□□□ -1.36
DDX11-219ENST00000542242 KRTAP12-2P59991 146 aa6.52□□□□□ -1.37
DDX11-219ENST00000542242 LCE3BQ5TA77 95 aa6.52□□□□□ -1.37
DDX11-219ENST00000542242 KRTAP9-4Q9BYQ2 154 aa6.5□□□□□ -1.37
DDX11-219ENST00000542242 SPRR2GQ9BYE4 73 aa6.47□□□□□ -1.37
DDX11-219ENST00000542242 SYNE2Q8WXH0 6885 aaKnown RBP6.46□□□□□ -1.38
DDX11-219ENST00000542242 MACF1Q9UPN3 7388 aaKnown RBP6.46□□□□□ -1.38
DDX11-219ENST00000542242 FCGBPQ9Y6R7 5405 aaPredicted RBP6.45□□□□□ -1.38
DDX11-219ENST00000542242 KRTAP9-9Q9BYP9 154 aa6.42□□□□□ -1.38
DDX11-219ENST00000542242 KRTAP6-3Q3LI67 103 aa6.4□□□□□ -1.38
DDX11-219ENST00000542242 KTN1-AS1Q86SY8 53 aa6.36□□□□□ -1.39
DDX11-219ENST00000542242 ROMO1P60602 79 aa6.34□□□□□ -1.39
DDX11-219ENST00000542242 KRTAP19-8Q3LI54 63 aa6.32□□□□□ -1.4
DDX11-219ENST00000542242 KRTAP19-6Q3LI70 58 aa6.32□□□□□ -1.4
DDX11-219ENST00000542242 PLAC4Q8WY50 150 aa6.32□□□□□ -1.4
DDX11-219ENST00000542242 CAMK2N1Q7Z7J9 78 aa6.31□□□□□ -1.4
DDX11-219ENST00000542242 MT1BP07438 61 aa6.24□□□□□ -1.41
DDX11-219ENST00000542242 KRTAP20-1Q3LI63 56 aa6.23□□□□□ -1.41
DDX11-219ENST00000542242 PRAC1Q96KF2 57 aa6.22□□□□□ -1.41
DDX11-219ENST00000542242 C10orf95Q9H7T3 257 aa6.2□□□□□ -1.42
DDX11-219ENST00000542242 LCE5AQ5TCM9 118 aa6.16□□□□□ -1.42
DDX11-219ENST00000542242 LCE1DQ5T752 114 aa6.09□□□□□ -1.43
DDX11-219ENST00000542242 NEBP20929 6669 aa6.06□□□□□ -1.44
DDX11-219ENST00000542242 KRTAP25-1Q3LHN0 102 aa6.06□□□□□ -1.44
DDX11-219ENST00000542242 KRTAP10-5P60370 271 aa6.03□□□□□ -1.44
DDX11-219ENST00000542242 MT1XP80297 61 aa6.03□□□□□ -1.44
DDX11-219ENST00000542242 KRTAP4-8A0A0G2JLE6 195 aa6.01□□□□□ -1.45
DDX11-219ENST00000542242 TNP1P09430 55 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms