RNA–Protein interactions for RNA: ENST00000540590.1

LMO3-223, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 565 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-223ENST00000540590 C20orf197Q8N268 126 aa6.46□□□□□ -1.38
LMO3-223ENST00000540590 CYP4F30PQ9H0H9 118 aa6.46□□□□□ -1.38
LMO3-223ENST00000540590 KLKP1Q107X0 134 aa6.45□□□□□ -1.38
LMO3-223ENST00000540590 NDUFC1O43677 76 aa6.43□□□□□ -1.38
LMO3-223ENST00000540590 SNURFQ9Y675 71 aa6.43□□□□□ -1.38
LMO3-223ENST00000540590 HRES1P13985 223 aa6.42□□□□□ -1.38
LMO3-223ENST00000540590 CCDC179H3BU77 68 aa6.4□□□□□ -1.38
LMO3-223ENST00000540590 RBM12B-AS1Q9P1G2 102 aa6.4□□□□□ -1.38
LMO3-223ENST00000540590 MPLKIPQ8TAP9 179 aa6.39□□□□□ -1.39
LMO3-223ENST00000540590 UBR4Q5T4S7 5183 aa6.35□□□□□ -1.39
LMO3-223ENST00000540590 A8MUN3 132 aa6.35□□□□□ -1.39
LMO3-223ENST00000540590 C4orf26Q17RF5 130 aa6.35□□□□□ -1.39
LMO3-223ENST00000540590 SPANXA2-OT1Q8N9U9 137 aa6.35□□□□□ -1.39
LMO3-223ENST00000540590 CYSTM1Q9H1C7 97 aa6.35□□□□□ -1.39
LMO3-223ENST00000540590 COX6B2Q6YFQ2 88 aa6.33□□□□□ -1.4
LMO3-223ENST00000540590 PCP4P48539 62 aa6.32□□□□□ -1.4
LMO3-223ENST00000540590 KRTAP3-1Q9BYR8 98 aa6.31□□□□□ -1.4
LMO3-223ENST00000540590 KRTAP19-2Q3LHN2 52 aa6.3□□□□□ -1.4
LMO3-223ENST00000540590 H7BZZ5 65 aa6.29□□□□□ -1.4
LMO3-223ENST00000540590 MUC2Q02817 5179 aa6.28□□□□□ -1.4
LMO3-223ENST00000540590 RNF213Q63HN8 5207 aa6.28□□□□□ -1.4
LMO3-223ENST00000540590 FAM236DA0A1B0GTK5 79 aa6.28□□□□□ -1.4
LMO3-223ENST00000540590 FAM236CP0DP71 79 aa6.28□□□□□ -1.4
LMO3-223ENST00000540590 ATP5EP56381 51 aaPredicted RBP6.26□□□□□ -1.41
LMO3-223ENST00000540590 DMAC1Q96GE9 116 aa6.25□□□□□ -1.41
LMO3-223ENST00000540590 H1FX-AS1Q4G0G2 97 aa6.24□□□□□ -1.41
LMO3-223ENST00000540590 ACYP2P14621 99 aa6.21□□□□□ -1.42
LMO3-223ENST00000540590 TMEM258P61165 79 aa6.21□□□□□ -1.42
LMO3-223ENST00000540590 FLGP20930 4061 aaPredicted RBP6.21□□□□□ -1.42
LMO3-223ENST00000540590 S4R3F8 94 aa6.13□□□□□ -1.43
LMO3-223ENST00000540590 MT1HP80294 61 aa6.11□□□□□ -1.43
LMO3-223ENST00000540590 SPTSSBQ8NFR3 76 aa6.1□□□□□ -1.43
LMO3-223ENST00000540590 LCA10Q71F78 164 aa6.09□□□□□ -1.43
LMO3-223ENST00000540590 FAT4Q6V0I7 4981 aa6.09□□□□□ -1.44
LMO3-223ENST00000540590 CHKB-CPT1BH3BT56 60 aa6.07□□□□□ -1.44
LMO3-223ENST00000540590 COA5Q86WW8 74 aa6.07□□□□□ -1.44
LMO3-223ENST00000540590 CSAG1Q6PB30 78 aa6.06□□□□□ -1.44
LMO3-223ENST00000540590 M0R2T5 61 aa6.02□□□□□ -1.45
LMO3-223ENST00000540590 SERP1Q9Y6X1 66 aa5.99□□□□□ -1.45
LMO3-223ENST00000540590 H0YAA0 97 aa5.97□□□□□ -1.45
LMO3-223ENST00000540590 RPS28P62857 69 aaKnown RBP5.93□□□□□ -1.46
LMO3-223ENST00000540590 KRTAP10-6P60371 365 aaPredicted RBP5.92□□□□□ -1.46
LMO3-223ENST00000540590 SEC61GP60059 68 aa5.84□□□□□ -1.47
LMO3-223ENST00000540590 V9GYY9 64 aa5.84□□□□□ -1.47
LMO3-223ENST00000540590 MT2AP02795 61 aa5.83□□□□□ -1.48
LMO3-223ENST00000540590 SMIM26A0A096LP01 95 aa5.82□□□□□ -1.48
LMO3-223ENST00000540590 CRIPTQ9P021 101 aa5.82□□□□□ -1.48
LMO3-223ENST00000540590 ADM2Q7Z4H4 148 aa5.81□□□□□ -1.48
LMO3-223ENST00000540590 MT1FP04733 61 aa5.79□□□□□ -1.48
LMO3-223ENST00000540590 PRR15LQ9BU68 103 aa5.79□□□□□ -1.48
LMO3-223ENST00000540590 LINC01558Q9Y6Z2 57 aa5.78□□□□□ -1.48
LMO3-223ENST00000540590 P0C880 135 aa5.77□□□□□ -1.49
LMO3-223ENST00000540590 KRTAP15-1Q3LI76 137 aa5.77□□□□□ -1.49
LMO3-223ENST00000540590 KRTAP10-10P60014 251 aa5.76□□□□□ -1.49
LMO3-223ENST00000540590 A0A1B0GU69 56 aa5.75□□□□□ -1.49
LMO3-223ENST00000540590 Q1T7F1 81 aa5.75□□□□□ -1.49
LMO3-223ENST00000540590 M0QZ58 72 aa5.7□□□□□ -1.5
LMO3-223ENST00000540590 R4GN34 69 aa5.66□□□□□ -1.5
LMO3-223ENST00000540590 SPRR2GQ9BYE4 73 aa5.64□□□□□ -1.51
LMO3-223ENST00000540590 A0A1B0GU33 70 aa5.63□□□□□ -1.51
LMO3-223ENST00000540590 PSPHP1O15172 72 aa5.63□□□□□ -1.51
LMO3-223ENST00000540590 Q5VV11 94 aa5.63□□□□□ -1.51
LMO3-223ENST00000540590 UQCR11O14957 56 aa5.59□□□□□ -1.51
LMO3-223ENST00000540590 KRTAP13-4Q3LI77 160 aa5.59□□□□□ -1.51
LMO3-223ENST00000540590 SPATA8Q6RVD6 105 aa5.55□□□□□ -1.52
LMO3-223ENST00000540590 A6NN06 94 aa5.54□□□□□ -1.52
LMO3-223ENST00000540590 KRTAP19-8Q3LI54 63 aa5.52□□□□□ -1.53
LMO3-223ENST00000540590 LINC01554Q52M75 96 aa5.51□□□□□ -1.53
LMO3-223ENST00000540590 KRTAP23-1A1A580 65 aa5.49□□□□□ -1.53
LMO3-223ENST00000540590 A0A0D9SG42 100 aa5.45□□□□□ -1.54
LMO3-223ENST00000540590 A6NED7 52 aa5.45□□□□□ -1.54
LMO3-223ENST00000540590 MT1BP07438 61 aa5.45□□□□□ -1.54
LMO3-223ENST00000540590 MIR22HGQ0VDD5 57 aa5.45□□□□□ -1.54
LMO3-223ENST00000540590 A8MU10 97 aa5.44□□□□□ -1.54
LMO3-223ENST00000540590 PLAC4Q8WY50 150 aa5.41□□□□□ -1.54
LMO3-223ENST00000540590 CDC42SE1Q9NRR8 79 aa5.37□□□□□ -1.55
LMO3-223ENST00000540590 KRTAP12-1P59990 96 aa5.36□□□□□ -1.55
LMO3-223ENST00000540590 K7ERS5 55 aa5.35□□□□□ -1.55
LMO3-223ENST00000540590 SPINT4Q6UDR6 99 aa5.34□□□□□ -1.55
LMO3-223ENST00000540590 KRTAP12-2P59991 146 aa5.33□□□□□ -1.56
LMO3-223ENST00000540590 USH2AO75445 5202 aa5.32□□□□□ -1.56
LMO3-223ENST00000540590 PRO2289Q9P1D8 64 aa5.29□□□□□ -1.56
LMO3-223ENST00000540590 KRTAP19-6Q3LI70 58 aa5.28□□□□□ -1.56
LMO3-223ENST00000540590 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.26□□□□□ -1.57
LMO3-223ENST00000540590 CAMK2N1Q7Z7J9 78 aa5.26□□□□□ -1.57
LMO3-223ENST00000540590 BRK1Q8WUW1 75 aa5.24□□□□□ -1.57
LMO3-223ENST00000540590 KRTAP10-5P60370 271 aa5.21□□□□□ -1.58
LMO3-223ENST00000540590 MT1XP80297 61 aa5.21□□□□□ -1.58
LMO3-223ENST00000540590 CRCT1Q9UGL9 99 aa5.2□□□□□ -1.58
LMO3-223ENST00000540590 FSIP2Q5CZC0 6907 aa5.2□□□□□ -1.58
LMO3-223ENST00000540590 SSPOA2VEC9 5147 aa5.18□□□□□ -1.58
LMO3-223ENST00000540590 KRTAP10-7P60409 375 aaPredicted RBP5.18□□□□□ -1.58
LMO3-223ENST00000540590 LCE1AQ5T7P2 110 aa5.12□□□□□ -1.59
LMO3-223ENST00000540590 KRTAP5-11Q6L8G4 156 aa5.11□□□□□ -1.59
LMO3-223ENST00000540590 C10orf95Q9H7T3 257 aa5.09□□□□□ -1.59
LMO3-223ENST00000540590 PRO0628Q9UI54 55 aa5.06□□□□□ -1.6
LMO3-223ENST00000540590 TNP1P09430 55 aa5.01□□□□□ -1.61
LMO3-223ENST00000540590 ROMO1P60602 79 aa5.01□□□□□ -1.61
LMO3-223ENST00000540590 FCGBPQ9Y6R7 5405 aaPredicted RBP5.01□□□□□ -1.61
LMO3-223ENST00000540590 KRTAP25-1Q3LHN0 102 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms