RNA–Protein interactions for RNA: ENST00000539449.2

RTN4IP1-204, Transcript of reticulon 4 interacting protein 1, humanhuman

TSL 2 BASIC

Gene RTN4IP1, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-204ENST00000539449 ATP11AUNQ6ZP68 121 aa4.81□□□□□ -1.64
RTN4IP1-204ENST00000539449 C1orf64Q8NEQ6 169 aa4.81□□□□□ -1.64
RTN4IP1-204ENST00000539449 IGKV2D-30A0A075B6S6 120 aa4.79□□□□□ -1.64
RTN4IP1-204ENST00000539449 KLKP1Q107X0 134 aa4.79□□□□□ -1.64
RTN4IP1-204ENST00000539449 KRTAP4-1Q9BYQ7 146 aa4.79□□□□□ -1.64
RTN4IP1-204ENST00000539449 CYP4F30PQ9H0H9 118 aa4.78□□□□□ -1.64
RTN4IP1-204ENST00000539449 H3BPC8 53 aa4.77□□□□□ -1.65
RTN4IP1-204ENST00000539449 SPINK7P58062 85 aa4.77□□□□□ -1.65
RTN4IP1-204ENST00000539449 LOC101927531A0A1B0GV80 90 aa4.76□□□□□ -1.65
RTN4IP1-204ENST00000539449 H7BZZ5 65 aa4.74□□□□□ -1.65
RTN4IP1-204ENST00000539449 SEC61BP60468 96 aaKnown RBP4.74□□□□□ -1.65
RTN4IP1-204ENST00000539449 C7orf65Q6ZTY9 151 aa4.74□□□□□ -1.65
RTN4IP1-204ENST00000539449 SSPOA2VEC9 5147 aa4.72□□□□□ -1.65
RTN4IP1-204ENST00000539449 HRES1P13985 223 aa4.72□□□□□ -1.65
RTN4IP1-204ENST00000539449 C4orf26Q17RF5 130 aa4.69□□□□□ -1.66
RTN4IP1-204ENST00000539449 USH2AO75445 5202 aa4.68□□□□□ -1.66
RTN4IP1-204ENST00000539449 NDUFC1O43677 76 aa4.67□□□□□ -1.66
RTN4IP1-204ENST00000539449 KRTAP3-1Q9BYR8 98 aa4.67□□□□□ -1.66
RTN4IP1-204ENST00000539449 SYNE2Q8WXH0 6885 aaKnown RBP4.66□□□□□ -1.66
RTN4IP1-204ENST00000539449 FCGBPQ9Y6R7 5405 aaPredicted RBP4.65□□□□□ -1.66
RTN4IP1-204ENST00000539449 MPLKIPQ8TAP9 179 aa4.65□□□□□ -1.67
RTN4IP1-204ENST00000539449 KRTAP19-2Q3LHN2 52 aa4.63□□□□□ -1.67
RTN4IP1-204ENST00000539449 KRTAP5-3Q6L8H2 238 aa4.63□□□□□ -1.67
RTN4IP1-204ENST00000539449 COX6B2Q6YFQ2 88 aa4.63□□□□□ -1.67
RTN4IP1-204ENST00000539449 SPANXA2-OT1Q8N9U9 137 aa4.63□□□□□ -1.67
RTN4IP1-204ENST00000539449 MACF1Q9UPN3 7388 aaKnown RBP4.62□□□□□ -1.67
RTN4IP1-204ENST00000539449 FAM236DA0A1B0GTK5 79 aa4.61□□□□□ -1.67
RTN4IP1-204ENST00000539449 FAM236CP0DP71 79 aa4.61□□□□□ -1.67
RTN4IP1-204ENST00000539449 TMEM258P61165 79 aa4.61□□□□□ -1.67
RTN4IP1-204ENST00000539449 MT1HP80294 61 aa4.61□□□□□ -1.67
RTN4IP1-204ENST00000539449 KRTAP10-6P60371 365 aaPredicted RBP4.6□□□□□ -1.67
RTN4IP1-204ENST00000539449 DMAC1Q96GE9 116 aa4.59□□□□□ -1.67
RTN4IP1-204ENST00000539449 RBM12B-AS1Q9P1G2 102 aa4.56□□□□□ -1.68
RTN4IP1-204ENST00000539449 ATP5EP56381 51 aaPredicted RBP4.54□□□□□ -1.68
RTN4IP1-204ENST00000539449 ACYP2P14621 99 aa4.53□□□□□ -1.68
RTN4IP1-204ENST00000539449 H1FX-AS1Q4G0G2 97 aa4.53□□□□□ -1.68
RTN4IP1-204ENST00000539449 COA5Q86WW8 74 aa4.53□□□□□ -1.68
RTN4IP1-204ENST00000539449 A8MUN3 132 aa4.52□□□□□ -1.69
RTN4IP1-204ENST00000539449 SERP1Q9Y6X1 66 aa4.49□□□□□ -1.69
RTN4IP1-204ENST00000539449 LCA10Q71F78 164 aa4.48□□□□□ -1.69
RTN4IP1-204ENST00000539449 FLGP20930 4061 aaPredicted RBP4.48□□□□□ -1.69
RTN4IP1-204ENST00000539449 M0R2T5 61 aa4.47□□□□□ -1.69
RTN4IP1-204ENST00000539449 S4R3F8 94 aa4.47□□□□□ -1.69
RTN4IP1-204ENST00000539449 CHKB-CPT1BH3BT56 60 aa4.45□□□□□ -1.7
RTN4IP1-204ENST00000539449 NEBP20929 6669 aa4.43□□□□□ -1.7
RTN4IP1-204ENST00000539449 RPS28P62857 69 aaKnown RBP4.43□□□□□ -1.7
RTN4IP1-204ENST00000539449 KRTAP9-8Q9BYQ0 159 aa4.43□□□□□ -1.7
RTN4IP1-204ENST00000539449 KRTAP6-3Q3LI67 103 aa4.39□□□□□ -1.71
RTN4IP1-204ENST00000539449 SMIM26A0A096LP01 95 aa4.36□□□□□ -1.71
RTN4IP1-204ENST00000539449 CSAG1Q6PB30 78 aa4.36□□□□□ -1.71
RTN4IP1-204ENST00000539449 KRTAP20-1Q3LI63 56 aa4.34□□□□□ -1.71
RTN4IP1-204ENST00000539449 SPTSSBQ8NFR3 76 aa4.34□□□□□ -1.71
RTN4IP1-204ENST00000539449 LINC01558Q9Y6Z2 57 aa4.32□□□□□ -1.72
RTN4IP1-204ENST00000539449 MUC12Q9UKN1 5478 aa4.31□□□□□ -1.72
RTN4IP1-204ENST00000539449 Q1T7F1 81 aa4.3□□□□□ -1.72
RTN4IP1-204ENST00000539449 P0C880 135 aa4.28□□□□□ -1.72
RTN4IP1-204ENST00000539449 ADM2Q7Z4H4 148 aa4.28□□□□□ -1.72
RTN4IP1-204ENST00000539449 PRR15LQ9BU68 103 aa4.27□□□□□ -1.73
RTN4IP1-204ENST00000539449 A0A1B0GU69 56 aa4.25□□□□□ -1.73
RTN4IP1-204ENST00000539449 H0YAA0 97 aa4.25□□□□□ -1.73
RTN4IP1-204ENST00000539449 PSPHP1O15172 72 aa4.25□□□□□ -1.73
RTN4IP1-204ENST00000539449 MT2AP02795 61 aa4.25□□□□□ -1.73
RTN4IP1-204ENST00000539449 Q5VV11 94 aa4.23□□□□□ -1.73
RTN4IP1-204ENST00000539449 V9GYY9 64 aa4.23□□□□□ -1.73
RTN4IP1-204ENST00000539449 MT1FP04733 61 aa4.22□□□□□ -1.73
RTN4IP1-204ENST00000539449 KRTAP19-6Q3LI70 58 aa4.21□□□□□ -1.74
RTN4IP1-204ENST00000539449 SEC61GP60059 68 aa4.2□□□□□ -1.74
RTN4IP1-204ENST00000539449 KRTAP13-4Q3LI77 160 aa4.18□□□□□ -1.74
RTN4IP1-204ENST00000539449 A0A1B0GU33 70 aa4.17□□□□□ -1.74
RTN4IP1-204ENST00000539449 KRTAP10-10P60014 251 aa4.17□□□□□ -1.74
RTN4IP1-204ENST00000539449 SPATA8Q6RVD6 105 aa4.15□□□□□ -1.75
RTN4IP1-204ENST00000539449 KMT2DO14686 5537 aa4.12□□□□□ -1.75
RTN4IP1-204ENST00000539449 M0QZ58 72 aa4.11□□□□□ -1.75
RTN4IP1-204ENST00000539449 MDN1Q9NU22 5596 aa4.1□□□□□ -1.75
RTN4IP1-204ENST00000539449 A6NED7 52 aa4.09□□□□□ -1.75
RTN4IP1-204ENST00000539449 A8MU10 97 aa4.09□□□□□ -1.75
RTN4IP1-204ENST00000539449 UQCR11O14957 56 aa4.08□□□□□ -1.76
RTN4IP1-204ENST00000539449 R4GN34 69 aa4.08□□□□□ -1.76
RTN4IP1-204ENST00000539449 KRTAP2-3P0C7H8 128 aa4.07□□□□□ -1.76
RTN4IP1-204ENST00000539449 SPRR2GQ9BYE4 73 aa4.07□□□□□ -1.76
RTN4IP1-204ENST00000539449 KRTAP2-4Q9BYR9 128 aa4.07□□□□□ -1.76
RTN4IP1-204ENST00000539449 CRIPTQ9P021 101 aa4.07□□□□□ -1.76
RTN4IP1-204ENST00000539449 MIR22HGQ0VDD5 57 aa4.06□□□□□ -1.76
RTN4IP1-204ENST00000539449 A0A0D9SG42 100 aa4.05□□□□□ -1.76
RTN4IP1-204ENST00000539449 LINC01554Q52M75 96 aa4.05□□□□□ -1.76
RTN4IP1-204ENST00000539449 GPR98Q8WXG9 6306 aa4.05□□□□□ -1.76
RTN4IP1-204ENST00000539449 KRTAP19-8Q3LI54 63 aa4□□□□□ -1.77
RTN4IP1-204ENST00000539449 CDC42SE1Q9NRR8 79 aa4□□□□□ -1.77
RTN4IP1-204ENST00000539449 MT1BP07438 61 aa3.99□□□□□ -1.77
RTN4IP1-204ENST00000539449 KRTAP12-1P59990 96 aa3.99□□□□□ -1.77
RTN4IP1-204ENST00000539449 KRTAP15-1Q3LI76 137 aa3.98□□□□□ -1.77
RTN4IP1-204ENST00000539449 BRK1Q8WUW1 75 aa3.98□□□□□ -1.77
RTN4IP1-204ENST00000539449 KRTAP12-2P59991 146 aa3.97□□□□□ -1.77
RTN4IP1-204ENST00000539449 SPINT4Q6UDR6 99 aa3.95□□□□□ -1.78
RTN4IP1-204ENST00000539449 KRTAP5-9P26371 169 aa3.94□□□□□ -1.78
RTN4IP1-204ENST00000539449 A6NN06 94 aa3.92□□□□□ -1.78
RTN4IP1-204ENST00000539449 KRTAP2-2Q9BYT5 123 aa3.91□□□□□ -1.78
RTN4IP1-204ENST00000539449 KRTAP2-1Q9BYU5 128 aa3.91□□□□□ -1.78
RTN4IP1-204ENST00000539449 KRTAP23-1A1A580 65 aa3.88□□□□□ -1.79
RTN4IP1-204ENST00000539449 PLAC4Q8WY50 150 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms