RNA–Protein interactions for RNA: ENST00000538064.1

LRRK1-211, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 5

Gene LRRK1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-211ENST00000538064 MACF1Q9UPN3 7388 aaKnown RBP6.96□□□□□ -1.3
LRRK1-211ENST00000538064 SYNE2Q8WXH0 6885 aaKnown RBP6.95□□□□□ -1.3
LRRK1-211ENST00000538064 H3BPC8 53 aa6.93□□□□□ -1.3
LRRK1-211ENST00000538064 S4R3F8 94 aa6.93□□□□□ -1.3
LRRK1-211ENST00000538064 SMIM20Q8N5G0 67 aa6.89□□□□□ -1.31
LRRK1-211ENST00000538064 FAM236AA0A1B0GUQ0 79 aa6.88□□□□□ -1.31
LRRK1-211ENST00000538064 FAM236BA0A1B0GV22 79 aa6.88□□□□□ -1.31
LRRK1-211ENST00000538064 CSAG1Q6PB30 78 aa6.86□□□□□ -1.31
LRRK1-211ENST00000538064 A8MUN3 132 aa6.85□□□□□ -1.31
LRRK1-211ENST00000538064 KLKP1Q107X0 134 aa6.85□□□□□ -1.31
LRRK1-211ENST00000538064 LCA10Q71F78 164 aa6.85□□□□□ -1.31
LRRK1-211ENST00000538064 TRAV7A0A075B6U4 112 aa6.83□□□□□ -1.32
LRRK1-211ENST00000538064 NDUFC1O43677 76 aa6.76□□□□□ -1.33
LRRK1-211ENST00000538064 KRTAP3-3Q9BYR6 98 aa6.76□□□□□ -1.33
LRRK1-211ENST00000538064 KRTAP6-3Q3LI67 103 aa6.73□□□□□ -1.33
LRRK1-211ENST00000538064 SPRR2GQ9BYE4 73 aa6.73□□□□□ -1.33
LRRK1-211ENST00000538064 MT1BP07438 61 aa6.71□□□□□ -1.34
LRRK1-211ENST00000538064 KRTAP19-8Q3LI54 63 aa6.7□□□□□ -1.34
LRRK1-211ENST00000538064 Q5VV11 94 aa6.7□□□□□ -1.34
LRRK1-211ENST00000538064 DMAC1Q96GE9 116 aa6.7□□□□□ -1.34
LRRK1-211ENST00000538064 SERP2Q8N6R1 65 aa6.69□□□□□ -1.34
LRRK1-211ENST00000538064 A6NN06 94 aa6.67□□□□□ -1.34
LRRK1-211ENST00000538064 SNURFQ9Y675 71 aa6.65□□□□□ -1.34
LRRK1-211ENST00000538064 C20orf197Q8N268 126 aa6.63□□□□□ -1.35
LRRK1-211ENST00000538064 ACYP2P14621 99 aa6.62□□□□□ -1.35
LRRK1-211ENST00000538064 H0YAA0 97 aa6.61□□□□□ -1.35
LRRK1-211ENST00000538064 CRIPTQ9P021 101 aa6.59□□□□□ -1.35
LRRK1-211ENST00000538064 NEBP20929 6669 aa6.58□□□□□ -1.36
LRRK1-211ENST00000538064 KRTAP10-5P60370 271 aa6.58□□□□□ -1.36
LRRK1-211ENST00000538064 SPANXA2-OT1Q8N9U9 137 aa6.56□□□□□ -1.36
LRRK1-211ENST00000538064 MUC12Q9UKN1 5478 aa6.56□□□□□ -1.36
LRRK1-211ENST00000538064 COX7CP15954 63 aa6.55□□□□□ -1.36
LRRK1-211ENST00000538064 ADM2Q7Z4H4 148 aa6.54□□□□□ -1.36
LRRK1-211ENST00000538064 SPTSSBQ8NFR3 76 aa6.53□□□□□ -1.36
LRRK1-211ENST00000538064 CHKB-CPT1BH3BT56 60 aa6.52□□□□□ -1.37
LRRK1-211ENST00000538064 ANAPC13Q9BS18 74 aa6.45□□□□□ -1.38
LRRK1-211ENST00000538064 KRTAP5-9P26371 169 aa6.41□□□□□ -1.38
LRRK1-211ENST00000538064 P0C880 135 aa6.38□□□□□ -1.39
LRRK1-211ENST00000538064 R4GN34 69 aa6.38□□□□□ -1.39
LRRK1-211ENST00000538064 KMT2DO14686 5537 aa6.37□□□□□ -1.39
LRRK1-211ENST00000538064 H7BZZ5 65 aa6.37□□□□□ -1.39
LRRK1-211ENST00000538064 KRTAP3-2Q9BYR7 98 aa6.36□□□□□ -1.39
LRRK1-211ENST00000538064 MDN1Q9NU22 5596 aa6.35□□□□□ -1.39
LRRK1-211ENST00000538064 COA5Q86WW8 74 aa6.34□□□□□ -1.39
LRRK1-211ENST00000538064 CYSTM1Q9H1C7 97 aa6.33□□□□□ -1.4
LRRK1-211ENST00000538064 M0QZ58 72 aa6.32□□□□□ -1.4
LRRK1-211ENST00000538064 PRO2289Q9P1D8 64 aa6.31□□□□□ -1.4
LRRK1-211ENST00000538064 CCDC179H3BU77 68 aa6.28□□□□□ -1.4
LRRK1-211ENST00000538064 MT1XP80297 61 aa6.28□□□□□ -1.4
LRRK1-211ENST00000538064 KRTAP20-1Q3LI63 56 aa6.27□□□□□ -1.41
LRRK1-211ENST00000538064 PLAC4Q8WY50 150 aa6.25□□□□□ -1.41
LRRK1-211ENST00000538064 SEC61GP60059 68 aa6.22□□□□□ -1.41
LRRK1-211ENST00000538064 LINC01554Q52M75 96 aa6.21□□□□□ -1.42
LRRK1-211ENST00000538064 ATP5EP56381 51 aaPredicted RBP6.2□□□□□ -1.42
LRRK1-211ENST00000538064 SERP1Q9Y6X1 66 aa6.19□□□□□ -1.42
LRRK1-211ENST00000538064 KRTAP12-2P59991 146 aa6.17□□□□□ -1.42
LRRK1-211ENST00000538064 SPRR2FQ96RM1 72 aa6.17□□□□□ -1.42
LRRK1-211ENST00000538064 KRTAP8-1Q8IUC2 63 aa6.12□□□□□ -1.43
LRRK1-211ENST00000538064 SPRR2EP22531 72 aa6.11□□□□□ -1.43
LRRK1-211ENST00000538064 SPRR2BP35325 72 aa6.11□□□□□ -1.43
LRRK1-211ENST00000538064 SPRR2AP35326 72 aa6.11□□□□□ -1.43
LRRK1-211ENST00000538064 TMEM258P61165 79 aa6.1□□□□□ -1.43
LRRK1-211ENST00000538064 KRTAP2-3P0C7H8 128 aa6.08□□□□□ -1.44
LRRK1-211ENST00000538064 KRTAP2-4Q9BYR9 128 aa6.08□□□□□ -1.44
LRRK1-211ENST00000538064 A0A1B0GU69 56 aa6.05□□□□□ -1.44
LRRK1-211ENST00000538064 A0A1B0GU33 70 aa6.04□□□□□ -1.44
LRRK1-211ENST00000538064 KRTAP13-4Q3LI77 160 aa6.04□□□□□ -1.44
LRRK1-211ENST00000538064 LCE1AQ5T7P2 110 aa6.02□□□□□ -1.45
LRRK1-211ENST00000538064 KRTAP4-8A0A0G2JLE6 195 aa6□□□□□ -1.45
LRRK1-211ENST00000538064 KRTAP4-8Q9BYQ9 185 aa6□□□□□ -1.45
LRRK1-211ENST00000538064 KRTAP10-7P60409 375 aaPredicted RBP5.98□□□□□ -1.45
LRRK1-211ENST00000538064 KRTAP10-12P60413 245 aa5.97□□□□□ -1.45
LRRK1-211ENST00000538064 PRR15LQ9BU68 103 aa5.97□□□□□ -1.45
LRRK1-211ENST00000538064 SPATA8Q6RVD6 105 aa5.95□□□□□ -1.46
LRRK1-211ENST00000538064 A0A0D9SG42 100 aa5.93□□□□□ -1.46
LRRK1-211ENST00000538064 CAMK2N1Q7Z7J9 78 aa5.91□□□□□ -1.46
LRRK1-211ENST00000538064 LINC01558Q9Y6Z2 57 aa5.91□□□□□ -1.46
LRRK1-211ENST00000538064 SPRR2DP22532 72 aa5.9□□□□□ -1.46
LRRK1-211ENST00000538064 SMIM26A0A096LP01 95 aa5.89□□□□□ -1.47
LRRK1-211ENST00000538064 KRTAP2-2Q9BYT5 123 aa5.88□□□□□ -1.47
LRRK1-211ENST00000538064 KRTAP2-1Q9BYU5 128 aa5.88□□□□□ -1.47
LRRK1-211ENST00000538064 SPINT4Q6UDR6 99 aa5.85□□□□□ -1.47
LRRK1-211ENST00000538064 KRTAP12-1P59990 96 aa5.8□□□□□ -1.48
LRRK1-211ENST00000538064 A8MU10 97 aa5.77□□□□□ -1.49
LRRK1-211ENST00000538064 V9GYY9 64 aa5.77□□□□□ -1.49
LRRK1-211ENST00000538064 PCP4P48539 62 aa5.76□□□□□ -1.49
LRRK1-211ENST00000538064 UQCR11O14957 56 aa5.75□□□□□ -1.49
LRRK1-211ENST00000538064 LCE3BQ5TA77 95 aa5.75□□□□□ -1.49
LRRK1-211ENST00000538064 Q1T7F1 81 aa5.69□□□□□ -1.5
LRRK1-211ENST00000538064 PSPHP1O15172 72 aa5.64□□□□□ -1.51
LRRK1-211ENST00000538064 MIR22HGQ0VDD5 57 aa5.64□□□□□ -1.51
LRRK1-211ENST00000538064 RPS28P62857 69 aaKnown RBP5.62□□□□□ -1.51
LRRK1-211ENST00000538064 KRTAP19-7Q3SYF9 63 aa5.62□□□□□ -1.51
LRRK1-211ENST00000538064 MT1EP04732 61 aa5.58□□□□□ -1.52
LRRK1-211ENST00000538064 LCE5AQ5TCM9 118 aa5.57□□□□□ -1.52
LRRK1-211ENST00000538064 KRTAP19-3Q7Z4W3 81 aa5.55□□□□□ -1.52
LRRK1-211ENST00000538064 K7ERS5 55 aa5.54□□□□□ -1.52
LRRK1-211ENST00000538064 TNP1P09430 55 aa5.52□□□□□ -1.53
LRRK1-211ENST00000538064 C10orf95Q9H7T3 257 aa5.51□□□□□ -1.53
LRRK1-211ENST00000538064 A6NED7 52 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms