RNA–Protein interactions for RNA: ENST00000534091.1

LDLRAD3-206, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-206ENST00000534091 SPINK7P58062 85 aa5.26□□□□□ -1.57
LDLRAD3-206ENST00000534091 HRES1P13985 223 aa5.25□□□□□ -1.57
LDLRAD3-206ENST00000534091 KRTAP4-1Q9BYQ7 146 aa5.23□□□□□ -1.57
LDLRAD3-206ENST00000534091 DMAC1Q96GE9 116 aa5.21□□□□□ -1.58
LDLRAD3-206ENST00000534091 A8MUN3 132 aa5.19□□□□□ -1.58
LDLRAD3-206ENST00000534091 SERP1Q9Y6X1 66 aa5.19□□□□□ -1.58
LDLRAD3-206ENST00000534091 RPS28P62857 69 aaKnown RBP5.18□□□□□ -1.58
LDLRAD3-206ENST00000534091 ACYP2P14621 99 aa5.15□□□□□ -1.59
LDLRAD3-206ENST00000534091 COX6B2Q6YFQ2 88 aa5.15□□□□□ -1.59
LDLRAD3-206ENST00000534091 MPLKIPQ8TAP9 179 aa5.14□□□□□ -1.59
LDLRAD3-206ENST00000534091 KRTAP19-2Q3LHN2 52 aa5.13□□□□□ -1.59
LDLRAD3-206ENST00000534091 FSIP2Q5CZC0 6907 aa5.12□□□□□ -1.59
LDLRAD3-206ENST00000534091 COA5Q86WW8 74 aa5.12□□□□□ -1.59
LDLRAD3-206ENST00000534091 KRTAP3-1Q9BYR8 98 aa5.11□□□□□ -1.59
LDLRAD3-206ENST00000534091 KRTAP23-1A1A580 65 aa5.08□□□□□ -1.6
LDLRAD3-206ENST00000534091 RBM12B-AS1Q9P1G2 102 aa5.08□□□□□ -1.6
LDLRAD3-206ENST00000534091 MT1HP80294 61 aa5.07□□□□□ -1.6
LDLRAD3-206ENST00000534091 PMAIP1Q13794 54 aa5.06□□□□□ -1.6
LDLRAD3-206ENST00000534091 SMIM26A0A096LP01 95 aa5.05□□□□□ -1.6
LDLRAD3-206ENST00000534091 LOC100996750A0A140TA64 210 aa5.04□□□□□ -1.6
LDLRAD3-206ENST00000534091 CHKB-CPT1BH3BT56 60 aa5.04□□□□□ -1.6
LDLRAD3-206ENST00000534091 KRTAP4-6Q9BYQ5 205 aa5.04□□□□□ -1.6
LDLRAD3-206ENST00000534091 H1FX-AS1Q4G0G2 97 aa5.03□□□□□ -1.6
LDLRAD3-206ENST00000534091 CRCT1Q9UGL9 99 aa5□□□□□ -1.61
LDLRAD3-206ENST00000534091 M0R2T5 61 aa4.99□□□□□ -1.61
LDLRAD3-206ENST00000534091 SPTSSBQ8NFR3 76 aa4.99□□□□□ -1.61
LDLRAD3-206ENST00000534091 KRTAP10-6P60371 365 aaPredicted RBP4.98□□□□□ -1.61
LDLRAD3-206ENST00000534091 S4R3F8 94 aa4.98□□□□□ -1.61
LDLRAD3-206ENST00000534091 Q1T7F1 81 aa4.96□□□□□ -1.62
LDLRAD3-206ENST00000534091 LCA10Q71F78 164 aa4.95□□□□□ -1.62
LDLRAD3-206ENST00000534091 FLGP20930 4061 aaPredicted RBP4.94□□□□□ -1.62
LDLRAD3-206ENST00000534091 LINC01558Q9Y6Z2 57 aa4.94□□□□□ -1.62
LDLRAD3-206ENST00000534091 PSPHP1O15172 72 aa4.9□□□□□ -1.63
LDLRAD3-206ENST00000534091 CSAG1Q6PB30 78 aa4.88□□□□□ -1.63
LDLRAD3-206ENST00000534091 PRR15LQ9BU68 103 aa4.85□□□□□ -1.63
LDLRAD3-206ENST00000534091 A0A1B0GU69 56 aa4.84□□□□□ -1.63
LDLRAD3-206ENST00000534091 KRTAP9-7A8MTY7 169 aa4.83□□□□□ -1.64
LDLRAD3-206ENST00000534091 H0YAA0 97 aa4.82□□□□□ -1.64
LDLRAD3-206ENST00000534091 Q5VV11 94 aa4.81□□□□□ -1.64
LDLRAD3-206ENST00000534091 KRTAP9-8Q9BYQ0 159 aa4.81□□□□□ -1.64
LDLRAD3-206ENST00000534091 MT2AP02795 61 aa4.73□□□□□ -1.65
LDLRAD3-206ENST00000534091 ADM2Q7Z4H4 148 aa4.73□□□□□ -1.65
LDLRAD3-206ENST00000534091 KTN1-AS1Q86SY8 53 aa4.73□□□□□ -1.65
LDLRAD3-206ENST00000534091 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.7□□□□□ -1.66
LDLRAD3-206ENST00000534091 UQCR11O14957 56 aa4.7□□□□□ -1.66
LDLRAD3-206ENST00000534091 P0C880 135 aa4.7□□□□□ -1.66
LDLRAD3-206ENST00000534091 PRAC1Q96KF2 57 aa4.7□□□□□ -1.66
LDLRAD3-206ENST00000534091 A0A1B0GU33 70 aa4.69□□□□□ -1.66
LDLRAD3-206ENST00000534091 KRTAP10-10P60014 251 aa4.69□□□□□ -1.66
LDLRAD3-206ENST00000534091 A6NED7 52 aa4.68□□□□□ -1.66
LDLRAD3-206ENST00000534091 MT1FP04733 61 aa4.68□□□□□ -1.66
LDLRAD3-206ENST00000534091 KRTAP9-3Q9BYQ3 159 aa4.67□□□□□ -1.66
LDLRAD3-206ENST00000534091 M0QZ58 72 aa4.64□□□□□ -1.67
LDLRAD3-206ENST00000534091 SPATA8Q6RVD6 105 aa4.64□□□□□ -1.67
LDLRAD3-206ENST00000534091 CDC42SE1Q9NRR8 79 aa4.64□□□□□ -1.67
LDLRAD3-206ENST00000534091 MIR22HGQ0VDD5 57 aa4.63□□□□□ -1.67
LDLRAD3-206ENST00000534091 BRK1Q8WUW1 75 aa4.63□□□□□ -1.67
LDLRAD3-206ENST00000534091 CRIPTQ9P021 101 aa4.62□□□□□ -1.67
LDLRAD3-206ENST00000534091 KRTAP4-8Q9BYQ9 185 aa4.61□□□□□ -1.67
LDLRAD3-206ENST00000534091 KRTAP13-4Q3LI77 160 aa4.6□□□□□ -1.67
LDLRAD3-206ENST00000534091 R4GN34 69 aa4.57□□□□□ -1.68
LDLRAD3-206ENST00000534091 SYNE2Q8WXH0 6885 aaKnown RBP4.55□□□□□ -1.68
LDLRAD3-206ENST00000534091 USH2AO75445 5202 aa4.54□□□□□ -1.68
LDLRAD3-206ENST00000534091 A8MU10 97 aa4.53□□□□□ -1.68
LDLRAD3-206ENST00000534091 LINC01554Q52M75 96 aa4.52□□□□□ -1.69
LDLRAD3-206ENST00000534091 SPRR2GQ9BYE4 73 aa4.51□□□□□ -1.69
LDLRAD3-206ENST00000534091 CAMK2N1Q7Z7J9 78 aa4.5□□□□□ -1.69
LDLRAD3-206ENST00000534091 KRTAP19-1Q8IUB9 90 aa4.5□□□□□ -1.69
LDLRAD3-206ENST00000534091 SSPOA2VEC9 5147 aa4.49□□□□□ -1.69
LDLRAD3-206ENST00000534091 KRTAP19-6Q3LI70 58 aa4.49□□□□□ -1.69
LDLRAD3-206ENST00000534091 MACF1Q9UPN3 7388 aaKnown RBP4.49□□□□□ -1.69
LDLRAD3-206ENST00000534091 A6NN06 94 aa4.48□□□□□ -1.69
LDLRAD3-206ENST00000534091 A0A0D9SG42 100 aa4.47□□□□□ -1.69
LDLRAD3-206ENST00000534091 KRTAP4-12Q9BQ66 201 aa4.45□□□□□ -1.7
LDLRAD3-206ENST00000534091 K7ERS5 55 aa4.44□□□□□ -1.7
LDLRAD3-206ENST00000534091 KRTAP12-1P59990 96 aa4.44□□□□□ -1.7
LDLRAD3-206ENST00000534091 FCGBPQ9Y6R7 5405 aaPredicted RBP4.42□□□□□ -1.7
LDLRAD3-206ENST00000534091 KRTAP19-8Q3LI54 63 aa4.41□□□□□ -1.7
LDLRAD3-206ENST00000534091 LUZP6Q538Z0 58 aa4.41□□□□□ -1.7
LDLRAD3-206ENST00000534091 KRTAP12-2P59991 146 aa4.4□□□□□ -1.71
LDLRAD3-206ENST00000534091 SPINT4Q6UDR6 99 aa4.39□□□□□ -1.71
LDLRAD3-206ENST00000534091 NEBP20929 6669 aa4.34□□□□□ -1.71
LDLRAD3-206ENST00000534091 MT1BP07438 61 aa4.33□□□□□ -1.72
LDLRAD3-206ENST00000534091 KRTAP9-9Q9BYP9 154 aa4.32□□□□□ -1.72
LDLRAD3-206ENST00000534091 KRTAP9-4Q9BYQ2 154 aa4.32□□□□□ -1.72
LDLRAD3-206ENST00000534091 LCE3BQ5TA77 95 aa4.31□□□□□ -1.72
LDLRAD3-206ENST00000534091 PLAC4Q8WY50 150 aa4.31□□□□□ -1.72
LDLRAD3-206ENST00000534091 KRTAP10-5P60370 271 aa4.26□□□□□ -1.73
LDLRAD3-206ENST00000534091 ROMO1P60602 79 aa4.25□□□□□ -1.73
LDLRAD3-206ENST00000534091 KRTAP6-3Q3LI67 103 aa4.25□□□□□ -1.73
LDLRAD3-206ENST00000534091 KRTAP4-8A0A0G2JLE6 195 aa4.22□□□□□ -1.73
LDLRAD3-206ENST00000534091 C10orf95Q9H7T3 257 aa4.2□□□□□ -1.74
LDLRAD3-206ENST00000534091 PRO2289Q9P1D8 64 aa4.18□□□□□ -1.74
LDLRAD3-206ENST00000534091 MT1XP80297 61 aa4.16□□□□□ -1.74
LDLRAD3-206ENST00000534091 KRTAP20-1Q3LI63 56 aa4.16□□□□□ -1.74
LDLRAD3-206ENST00000534091 KRTAP25-1Q3LHN0 102 aa4.12□□□□□ -1.75
LDLRAD3-206ENST00000534091 TNP1P09430 55 aa4.09□□□□□ -1.75
LDLRAD3-206ENST00000534091 NDUFAF8A1L188 74 aa4.08□□□□□ -1.76
LDLRAD3-206ENST00000534091 KRTAP5-9P26371 169 aa4.08□□□□□ -1.76
LDLRAD3-206ENST00000534091 LCE1DQ5T752 114 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms