RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 LINC00208Q96KT6 92 aa5.53□□□□□ -1.52
CLCF1-202ENST00000533438 ANAPC13Q9BS18 74 aa5.53□□□□□ -1.52
CLCF1-202ENST00000533438 COX7CP15954 63 aa5.52□□□□□ -1.53
CLCF1-202ENST00000533438 KRTAP10-10P60014 251 aa5.52□□□□□ -1.53
CLCF1-202ENST00000533438 CYP4F30PQ9H0H9 118 aa5.52□□□□□ -1.53
CLCF1-202ENST00000533438 SYNE2Q8WXH0 6885 aaKnown RBP5.49□□□□□ -1.53
CLCF1-202ENST00000533438 MACF1Q9UPN3 7388 aaKnown RBP5.49□□□□□ -1.53
CLCF1-202ENST00000533438 C20orf197Q8N268 126 aa5.47□□□□□ -1.53
CLCF1-202ENST00000533438 KLKP1Q107X0 134 aa5.46□□□□□ -1.54
CLCF1-202ENST00000533438 KRTAP19-6Q3LI70 58 aa5.45□□□□□ -1.54
CLCF1-202ENST00000533438 SNURFQ9Y675 71 aa5.45□□□□□ -1.54
CLCF1-202ENST00000533438 C4orf26Q17RF5 130 aa5.41□□□□□ -1.54
CLCF1-202ENST00000533438 CCDC179H3BU77 68 aa5.4□□□□□ -1.54
CLCF1-202ENST00000533438 KRTAP6-3Q3LI67 103 aa5.4□□□□□ -1.54
CLCF1-202ENST00000533438 NDUFC1O43677 76 aa5.38□□□□□ -1.55
CLCF1-202ENST00000533438 CYSTM1Q9H1C7 97 aa5.37□□□□□ -1.55
CLCF1-202ENST00000533438 H7BZZ5 65 aa5.36□□□□□ -1.55
CLCF1-202ENST00000533438 KRTAP3-1Q9BYR8 98 aa5.36□□□□□ -1.55
CLCF1-202ENST00000533438 H1FX-AS1Q4G0G2 97 aa5.35□□□□□ -1.55
CLCF1-202ENST00000533438 SPANXA2-OT1Q8N9U9 137 aa5.35□□□□□ -1.55
CLCF1-202ENST00000533438 A8MUN3 132 aa5.34□□□□□ -1.55
CLCF1-202ENST00000533438 DMAC1Q96GE9 116 aa5.32□□□□□ -1.56
CLCF1-202ENST00000533438 ACYP2P14621 99 aa5.25□□□□□ -1.57
CLCF1-202ENST00000533438 TMEM258P61165 79 aa5.24□□□□□ -1.57
CLCF1-202ENST00000533438 ATP5EP56381 51 aaPredicted RBP5.23□□□□□ -1.57
CLCF1-202ENST00000533438 S4R3F8 94 aa5.23□□□□□ -1.57
CLCF1-202ENST00000533438 LCA10Q71F78 164 aa5.21□□□□□ -1.58
CLCF1-202ENST00000533438 NEBP20929 6669 aa5.19□□□□□ -1.58
CLCF1-202ENST00000533438 RPS28P62857 69 aaKnown RBP5.19□□□□□ -1.58
CLCF1-202ENST00000533438 KRTAP3-3Q9BYR6 98 aa5.19□□□□□ -1.58
CLCF1-202ENST00000533438 COA5Q86WW8 74 aa5.16□□□□□ -1.58
CLCF1-202ENST00000533438 CHKB-CPT1BH3BT56 60 aa5.14□□□□□ -1.59
CLCF1-202ENST00000533438 CSAG1Q6PB30 78 aa5.14□□□□□ -1.59
CLCF1-202ENST00000533438 MT1BP07438 61 aa5.11□□□□□ -1.59
CLCF1-202ENST00000533438 SPTSSBQ8NFR3 76 aa5.11□□□□□ -1.59
CLCF1-202ENST00000533438 MUC12Q9UKN1 5478 aa5.1□□□□□ -1.59
CLCF1-202ENST00000533438 SPRR2GQ9BYE4 73 aa5.09□□□□□ -1.59
CLCF1-202ENST00000533438 KRTAP19-8Q3LI54 63 aa5.08□□□□□ -1.6
CLCF1-202ENST00000533438 KRTAP20-1Q3LI63 56 aa5.08□□□□□ -1.6
CLCF1-202ENST00000533438 Q5VV11 94 aa5.07□□□□□ -1.6
CLCF1-202ENST00000533438 SERP1Q9Y6X1 66 aa5.07□□□□□ -1.6
CLCF1-202ENST00000533438 A6NN06 94 aa5.05□□□□□ -1.6
CLCF1-202ENST00000533438 KRTAP5-9P26371 169 aa5.05□□□□□ -1.6
CLCF1-202ENST00000533438 H0YAA0 97 aa5.04□□□□□ -1.6
CLCF1-202ENST00000533438 KRTAP10-5P60370 271 aa5.01□□□□□ -1.61
CLCF1-202ENST00000533438 ADM2Q7Z4H4 148 aa4.97□□□□□ -1.61
CLCF1-202ENST00000533438 KMT2DO14686 5537 aa4.97□□□□□ -1.61
CLCF1-202ENST00000533438 MDN1Q9NU22 5596 aa4.96□□□□□ -1.62
CLCF1-202ENST00000533438 KRTAP3-2Q9BYR7 98 aa4.96□□□□□ -1.62
CLCF1-202ENST00000533438 CRIPTQ9P021 101 aa4.95□□□□□ -1.62
CLCF1-202ENST00000533438 KRTAP2-3P0C7H8 128 aa4.92□□□□□ -1.62
CLCF1-202ENST00000533438 KRTAP2-4Q9BYR9 128 aa4.92□□□□□ -1.62
CLCF1-202ENST00000533438 SMIM26A0A096LP01 95 aa4.91□□□□□ -1.62
CLCF1-202ENST00000533438 P0C880 135 aa4.91□□□□□ -1.62
CLCF1-202ENST00000533438 SEC61GP60059 68 aa4.91□□□□□ -1.62
CLCF1-202ENST00000533438 LINC01558Q9Y6Z2 57 aa4.91□□□□□ -1.62
CLCF1-202ENST00000533438 PRO0628Q9UI54 55 aa4.9□□□□□ -1.63
CLCF1-202ENST00000533438 A0A1B0GU69 56 aa4.88□□□□□ -1.63
CLCF1-202ENST00000533438 Q1T7F1 81 aa4.87□□□□□ -1.63
CLCF1-202ENST00000533438 V9GYY9 64 aa4.87□□□□□ -1.63
CLCF1-202ENST00000533438 PRR15LQ9BU68 103 aa4.85□□□□□ -1.63
CLCF1-202ENST00000533438 R4GN34 69 aa4.81□□□□□ -1.64
CLCF1-202ENST00000533438 M0QZ58 72 aa4.8□□□□□ -1.64
CLCF1-202ENST00000533438 A0A1B0GU33 70 aa4.79□□□□□ -1.64
CLCF1-202ENST00000533438 MT1XP80297 61 aa4.76□□□□□ -1.65
CLCF1-202ENST00000533438 PSPHP1O15172 72 aa4.75□□□□□ -1.65
CLCF1-202ENST00000533438 KRTAP13-4Q3LI77 160 aa4.75□□□□□ -1.65
CLCF1-202ENST00000533438 PRO2289Q9P1D8 64 aa4.75□□□□□ -1.65
CLCF1-202ENST00000533438 KRTAP2-2Q9BYT5 123 aa4.74□□□□□ -1.65
CLCF1-202ENST00000533438 KRTAP2-1Q9BYU5 128 aa4.74□□□□□ -1.65
CLCF1-202ENST00000533438 UQCR11O14957 56 aa4.71□□□□□ -1.66
CLCF1-202ENST00000533438 SPATA8Q6RVD6 105 aa4.71□□□□□ -1.66
CLCF1-202ENST00000533438 PLAC4Q8WY50 150 aa4.71□□□□□ -1.66
CLCF1-202ENST00000533438 SPRR2EP22531 72 aa4.69□□□□□ -1.66
CLCF1-202ENST00000533438 SPRR2BP35325 72 aa4.69□□□□□ -1.66
CLCF1-202ENST00000533438 SPRR2AP35326 72 aa4.69□□□□□ -1.66
CLCF1-202ENST00000533438 SPRR2FQ96RM1 72 aa4.69□□□□□ -1.66
CLCF1-202ENST00000533438 LINC01554Q52M75 96 aa4.68□□□□□ -1.66
CLCF1-202ENST00000533438 KRTAP12-2P59991 146 aa4.67□□□□□ -1.66
CLCF1-202ENST00000533438 LCE1AQ5T7P2 110 aa4.67□□□□□ -1.66
CLCF1-202ENST00000533438 KRTAP8-1Q8IUC2 63 aa4.65□□□□□ -1.67
CLCF1-202ENST00000533438 BRK1Q8WUW1 75 aa4.65□□□□□ -1.67
CLCF1-202ENST00000533438 MIR22HGQ0VDD5 57 aa4.63□□□□□ -1.67
CLCF1-202ENST00000533438 A0A0D9SG42 100 aa4.62□□□□□ -1.67
CLCF1-202ENST00000533438 A6NED7 52 aa4.62□□□□□ -1.67
CLCF1-202ENST00000533438 A8MU10 97 aa4.61□□□□□ -1.67
CLCF1-202ENST00000533438 PMAIP1Q13794 54 aa4.59□□□□□ -1.67
CLCF1-202ENST00000533438 KRTAP4-8A0A0G2JLE6 195 aa4.58□□□□□ -1.68
CLCF1-202ENST00000533438 KRTAP4-8Q9BYQ9 185 aa4.58□□□□□ -1.68
CLCF1-202ENST00000533438 KRTAP12-1P59990 96 aa4.57□□□□□ -1.68
CLCF1-202ENST00000533438 SPRR2DP22532 72 aa4.55□□□□□ -1.68
CLCF1-202ENST00000533438 KRTAP10-7P60409 375 aaPredicted RBP4.54□□□□□ -1.68
CLCF1-202ENST00000533438 KRTAP10-12P60413 245 aa4.53□□□□□ -1.68
CLCF1-202ENST00000533438 SPINT4Q6UDR6 99 aa4.53□□□□□ -1.68
CLCF1-202ENST00000533438 CDC42SE1Q9NRR8 79 aa4.53□□□□□ -1.68
CLCF1-202ENST00000533438 LCE3BQ5TA77 95 aa4.47□□□□□ -1.69
CLCF1-202ENST00000533438 CAMK2N1Q7Z7J9 78 aa4.47□□□□□ -1.69
CLCF1-202ENST00000533438 K7ERS5 55 aa4.46□□□□□ -1.7
CLCF1-202ENST00000533438 KTN1-AS1Q86SY8 53 aa4.46□□□□□ -1.7
CLCF1-202ENST00000533438 GPR98Q8WXG9 6306 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms