RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 IGKV2D-30A0A075B6S6 120 aa5.72□□□□□ -1.49
TRAPPC4-211ENST00000533012 IGKV2-30P06310 120 aa5.72□□□□□ -1.49
TRAPPC4-211ENST00000533012 C7orf65Q6ZTY9 151 aa5.71□□□□□ -1.5
TRAPPC4-211ENST00000533012 MPLKIPQ8TAP9 179 aa5.7□□□□□ -1.5
TRAPPC4-211ENST00000533012 ACYP2P14621 99 aa5.66□□□□□ -1.5
TRAPPC4-211ENST00000533012 MT1HP80294 61 aa5.66□□□□□ -1.5
TRAPPC4-211ENST00000533012 KRTAP9-6A0A140TA67 174 aa5.64□□□□□ -1.51
TRAPPC4-211ENST00000533012 COA5Q86WW8 74 aa5.64□□□□□ -1.51
TRAPPC4-211ENST00000533012 M0R2T5 61 aa5.63□□□□□ -1.51
TRAPPC4-211ENST00000533012 Q1T7F1 81 aa5.63□□□□□ -1.51
TRAPPC4-211ENST00000533012 KRTAP9-2Q9BYQ4 174 aa5.63□□□□□ -1.51
TRAPPC4-211ENST00000533012 C4orf26Q17RF5 130 aa5.6□□□□□ -1.51
TRAPPC4-211ENST00000533012 DMAC1Q96GE9 116 aa5.6□□□□□ -1.51
TRAPPC4-211ENST00000533012 FLGP20930 4061 aaPredicted RBP5.6□□□□□ -1.51
TRAPPC4-211ENST00000533012 A8MUN3 132 aa5.59□□□□□ -1.51
TRAPPC4-211ENST00000533012 CHKB-CPT1BH3BT56 60 aa5.59□□□□□ -1.51
TRAPPC4-211ENST00000533012 H1FX-AS1Q4G0G2 97 aa5.56□□□□□ -1.52
TRAPPC4-211ENST00000533012 SPTSSBQ8NFR3 76 aa5.53□□□□□ -1.52
TRAPPC4-211ENST00000533012 KRTAP10-6P60371 365 aaPredicted RBP5.51□□□□□ -1.53
TRAPPC4-211ENST00000533012 PRR15LQ9BU68 103 aa5.5□□□□□ -1.53
TRAPPC4-211ENST00000533012 KRTAP3-1Q9BYR8 98 aa5.5□□□□□ -1.53
TRAPPC4-211ENST00000533012 LINC01558Q9Y6Z2 57 aa5.5□□□□□ -1.53
TRAPPC4-211ENST00000533012 PSPHP1O15172 72 aa5.45□□□□□ -1.54
TRAPPC4-211ENST00000533012 PRO0628Q9UI54 55 aa5.43□□□□□ -1.54
TRAPPC4-211ENST00000533012 S4R3F8 94 aa5.43□□□□□ -1.54
TRAPPC4-211ENST00000533012 BRK1Q8WUW1 75 aa5.42□□□□□ -1.54
TRAPPC4-211ENST00000533012 SEC61GP60059 68 aa5.4□□□□□ -1.54
TRAPPC4-211ENST00000533012 Q5VV11 94 aa5.4□□□□□ -1.54
TRAPPC4-211ENST00000533012 KRTAP9-8Q9BYQ0 159 aa5.4□□□□□ -1.54
TRAPPC4-211ENST00000533012 A0A1B0GU69 56 aa5.39□□□□□ -1.55
TRAPPC4-211ENST00000533012 LCA10Q71F78 164 aa5.39□□□□□ -1.55
TRAPPC4-211ENST00000533012 CSAG1Q6PB30 78 aa5.38□□□□□ -1.55
TRAPPC4-211ENST00000533012 A6NED7 52 aa5.37□□□□□ -1.55
TRAPPC4-211ENST00000533012 SVIPQ8NHG7 77 aa5.37□□□□□ -1.55
TRAPPC4-211ENST00000533012 MT2AP02795 61 aa5.34□□□□□ -1.55
TRAPPC4-211ENST00000533012 KRTAP10-10P60014 251 aa5.33□□□□□ -1.56
TRAPPC4-211ENST00000533012 KRTAP4-8Q9BYQ9 185 aa5.32□□□□□ -1.56
TRAPPC4-211ENST00000533012 FSIP2Q5CZC0 6907 aa5.32□□□□□ -1.56
TRAPPC4-211ENST00000533012 CDC42SE1Q9NRR8 79 aa5.31□□□□□ -1.56
TRAPPC4-211ENST00000533012 MT1FP04733 61 aa5.3□□□□□ -1.56
TRAPPC4-211ENST00000533012 UQCR11O14957 56 aa5.29□□□□□ -1.56
TRAPPC4-211ENST00000533012 KRTAP9-3Q9BYQ3 159 aa5.22□□□□□ -1.57
TRAPPC4-211ENST00000533012 CRCT1Q9UGL9 99 aa5.21□□□□□ -1.58
TRAPPC4-211ENST00000533012 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.2□□□□□ -1.58
TRAPPC4-211ENST00000533012 MIR22HGQ0VDD5 57 aa5.2□□□□□ -1.58
TRAPPC4-211ENST00000533012 H0YAA0 97 aa5.18□□□□□ -1.58
TRAPPC4-211ENST00000533012 SPATA8Q6RVD6 105 aa5.18□□□□□ -1.58
TRAPPC4-211ENST00000533012 PMAIP1Q13794 54 aa5.15□□□□□ -1.59
TRAPPC4-211ENST00000533012 A0A1B0GU33 70 aa5.14□□□□□ -1.59
TRAPPC4-211ENST00000533012 ADM2Q7Z4H4 148 aa5.14□□□□□ -1.59
TRAPPC4-211ENST00000533012 CRIPTQ9P021 101 aa5.12□□□□□ -1.59
TRAPPC4-211ENST00000533012 USH2AO75445 5202 aa5.11□□□□□ -1.59
TRAPPC4-211ENST00000533012 K7ERS5 55 aa5.08□□□□□ -1.6
TRAPPC4-211ENST00000533012 LCE3BQ5TA77 95 aa5.08□□□□□ -1.6
TRAPPC4-211ENST00000533012 KRTAP4-12Q9BQ66 201 aa5.07□□□□□ -1.6
TRAPPC4-211ENST00000533012 KRTAP19-1Q8IUB9 90 aa5.06□□□□□ -1.6
TRAPPC4-211ENST00000533012 SPRR2GQ9BYE4 73 aa5.06□□□□□ -1.6
TRAPPC4-211ENST00000533012 A8MU10 97 aa5.05□□□□□ -1.6
TRAPPC4-211ENST00000533012 P0C880 135 aa5.04□□□□□ -1.6
TRAPPC4-211ENST00000533012 A6NN06 94 aa5.03□□□□□ -1.6
TRAPPC4-211ENST00000533012 KTN1-AS1Q86SY8 53 aa5.01□□□□□ -1.61
TRAPPC4-211ENST00000533012 SSPOA2VEC9 5147 aa5□□□□□ -1.61
TRAPPC4-211ENST00000533012 KRTAP9-7A8MTY7 169 aa5□□□□□ -1.61
TRAPPC4-211ENST00000533012 R4GN34 69 aa5□□□□□ -1.61
TRAPPC4-211ENST00000533012 KRTAP19-8Q3LI54 63 aa4.98□□□□□ -1.61
TRAPPC4-211ENST00000533012 M0QZ58 72 aa4.96□□□□□ -1.62
TRAPPC4-211ENST00000533012 KRTAP9-9Q9BYP9 154 aa4.94□□□□□ -1.62
TRAPPC4-211ENST00000533012 KRTAP9-4Q9BYQ2 154 aa4.94□□□□□ -1.62
TRAPPC4-211ENST00000533012 MT1BP07438 61 aa4.93□□□□□ -1.62
TRAPPC4-211ENST00000533012 KRTAP19-6Q3LI70 58 aa4.91□□□□□ -1.62
TRAPPC4-211ENST00000533012 KRTAP4-8A0A0G2JLE6 195 aa4.9□□□□□ -1.63
TRAPPC4-211ENST00000533012 LINC01554Q52M75 96 aa4.88□□□□□ -1.63
TRAPPC4-211ENST00000533012 PLAC4Q8WY50 150 aa4.87□□□□□ -1.63
TRAPPC4-211ENST00000533012 FCGBPQ9Y6R7 5405 aaPredicted RBP4.84□□□□□ -1.63
TRAPPC4-211ENST00000533012 A0A0D9SG42 100 aa4.83□□□□□ -1.64
TRAPPC4-211ENST00000533012 KRTAP13-4Q3LI77 160 aa4.81□□□□□ -1.64
TRAPPC4-211ENST00000533012 KRTAP10-5P60370 271 aa4.78□□□□□ -1.64
TRAPPC4-211ENST00000533012 ROMO1P60602 79 aa4.77□□□□□ -1.65
TRAPPC4-211ENST00000533012 LCE1DQ5T752 114 aa4.75□□□□□ -1.65
TRAPPC4-211ENST00000533012 SPINT4Q6UDR6 99 aa4.75□□□□□ -1.65
TRAPPC4-211ENST00000533012 KRTAP4-7Q9BYR0 210 aa4.74□□□□□ -1.65
TRAPPC4-211ENST00000533012 PRO2289Q9P1D8 64 aa4.74□□□□□ -1.65
TRAPPC4-211ENST00000533012 KRTAP12-1P59990 96 aa4.72□□□□□ -1.65
TRAPPC4-211ENST00000533012 KRTAP12-2P59991 146 aa4.69□□□□□ -1.66
TRAPPC4-211ENST00000533012 MT1XP80297 61 aa4.69□□□□□ -1.66
TRAPPC4-211ENST00000533012 SYNE2Q8WXH0 6885 aaKnown RBP4.69□□□□□ -1.66
TRAPPC4-211ENST00000533012 PRAC1Q96KF2 57 aa4.67□□□□□ -1.66
TRAPPC4-211ENST00000533012 MACF1Q9UPN3 7388 aaKnown RBP4.65□□□□□ -1.66
TRAPPC4-211ENST00000533012 CAMK2N1Q7Z7J9 78 aa4.65□□□□□ -1.67
TRAPPC4-211ENST00000533012 KRTAP25-1Q3LHN0 102 aa4.64□□□□□ -1.67
TRAPPC4-211ENST00000533012 KRTAP4-9Q9BYQ8 210 aa4.61□□□□□ -1.67
TRAPPC4-211ENST00000533012 KRTAP4-2Q9BYR5 136 aa4.52□□□□□ -1.69
TRAPPC4-211ENST00000533012 KRTAP6-3Q3LI67 103 aa4.5□□□□□ -1.69
TRAPPC4-211ENST00000533012 KRTAP10-7P60409 375 aaPredicted RBP4.49□□□□□ -1.69
TRAPPC4-211ENST00000533012 KRTAP19-4Q3LI73 84 aa4.48□□□□□ -1.69
TRAPPC4-211ENST00000533012 KRTAP10-12P60413 245 aa4.47□□□□□ -1.69
TRAPPC4-211ENST00000533012 NEBP20929 6669 aa4.47□□□□□ -1.69
TRAPPC4-211ENST00000533012 LCE4AQ5TA78 99 aa4.46□□□□□ -1.7
TRAPPC4-211ENST00000533012 KMT2DO14686 5537 aa4.46□□□□□ -1.7
TRAPPC4-211ENST00000533012 PP632Q6XCG6 107 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 149.9 ms