RNA–Protein interactions for RNA: ENST00000531625.1

UBXN1-212, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-212ENST00000531625 C1orf64Q8NEQ6 169 aa9.09□□□□□ -0.95
UBXN1-212ENST00000531625 C5orf47Q569G3 176 aa9.08□□□□□ -0.96
UBXN1-212ENST00000531625 LINC00208Q96KT6 92 aa9.08□□□□□ -0.96
UBXN1-212ENST00000531625 SMIM20Q8N5G0 67 aa9.04□□□□□ -0.96
UBXN1-212ENST00000531625 H1FX-AS1Q4G0G2 97 aa9.03□□□□□ -0.96
UBXN1-212ENST00000531625 TRAV7A0A075B6U4 112 aa9.01□□□□□ -0.97
UBXN1-212ENST00000531625 H3BPC8 53 aa9□□□□□ -0.97
UBXN1-212ENST00000531625 KLKP1Q107X0 134 aa8.95□□□□□ -0.98
UBXN1-212ENST00000531625 KRTAP3-1Q9BYR8 98 aa8.95□□□□□ -0.98
UBXN1-212ENST00000531625 NEBP20929 6669 aa8.91□□□□□ -0.98
UBXN1-212ENST00000531625 SERP2Q8N6R1 65 aa8.88□□□□□ -0.99
UBXN1-212ENST00000531625 MUC12Q9UKN1 5478 aa8.86□□□□□ -0.99
UBXN1-212ENST00000531625 S4R3F8 94 aa8.85□□□□□ -0.99
UBXN1-212ENST00000531625 SNURFQ9Y675 71 aa8.81□□□□□ -1
UBXN1-212ENST00000531625 C20orf197Q8N268 126 aa8.8□□□□□ -1
UBXN1-212ENST00000531625 A8MUN3 132 aa8.79□□□□□ -1
UBXN1-212ENST00000531625 LCA10Q71F78 164 aa8.78□□□□□ -1
UBXN1-212ENST00000531625 COX7CP15954 63 aa8.72□□□□□ -1.01
UBXN1-212ENST00000531625 A6NN06 94 aa8.71□□□□□ -1.02
UBXN1-212ENST00000531625 CSAG1Q6PB30 78 aa8.71□□□□□ -1.02
UBXN1-212ENST00000531625 DMAC1Q96GE9 116 aa8.7□□□□□ -1.02
UBXN1-212ENST00000531625 KRTAP20-1Q3LI63 56 aa8.69□□□□□ -1.02
UBXN1-212ENST00000531625 ANAPC13Q9BS18 74 aa8.69□□□□□ -1.02
UBXN1-212ENST00000531625 KRTAP3-3Q9BYR6 98 aa8.67□□□□□ -1.02
UBXN1-212ENST00000531625 NDUFC1O43677 76 aa8.65□□□□□ -1.02
UBXN1-212ENST00000531625 MT1BP07438 61 aa8.65□□□□□ -1.02
UBXN1-212ENST00000531625 Q5VV11 94 aa8.6□□□□□ -1.03
UBXN1-212ENST00000531625 ACYP2P14621 99 aa8.59□□□□□ -1.03
UBXN1-212ENST00000531625 SPANXA2-OT1Q8N9U9 137 aa8.59□□□□□ -1.03
UBXN1-212ENST00000531625 MDN1Q9NU22 5596 aa8.59□□□□□ -1.04
UBXN1-212ENST00000531625 KRTAP5-9P26371 169 aa8.58□□□□□ -1.04
UBXN1-212ENST00000531625 KRTAP19-8Q3LI54 63 aa8.58□□□□□ -1.04
UBXN1-212ENST00000531625 KMT2DO14686 5537 aa8.58□□□□□ -1.04
UBXN1-212ENST00000531625 KRTAP10-5P60370 271 aa8.55□□□□□ -1.04
UBXN1-212ENST00000531625 SPRR2GQ9BYE4 73 aa8.55□□□□□ -1.04
UBXN1-212ENST00000531625 CYSTM1Q9H1C7 97 aa8.52□□□□□ -1.05
UBXN1-212ENST00000531625 CCDC179H3BU77 68 aa8.49□□□□□ -1.05
UBXN1-212ENST00000531625 H7BZZ5 65 aa8.49□□□□□ -1.05
UBXN1-212ENST00000531625 CHKB-CPT1BH3BT56 60 aa8.47□□□□□ -1.05
UBXN1-212ENST00000531625 H0YAA0 97 aa8.41□□□□□ -1.06
UBXN1-212ENST00000531625 SPTSSBQ8NFR3 76 aa8.41□□□□□ -1.06
UBXN1-212ENST00000531625 ADM2Q7Z4H4 148 aa8.39□□□□□ -1.07
UBXN1-212ENST00000531625 KRTAP2-3P0C7H8 128 aa8.36□□□□□ -1.07
UBXN1-212ENST00000531625 KRTAP2-4Q9BYR9 128 aa8.36□□□□□ -1.07
UBXN1-212ENST00000531625 COA5Q86WW8 74 aa8.35□□□□□ -1.07
UBXN1-212ENST00000531625 CRIPTQ9P021 101 aa8.27□□□□□ -1.09
UBXN1-212ENST00000531625 P0C880 135 aa8.24□□□□□ -1.09
UBXN1-212ENST00000531625 ATP5EP56381 51 aaPredicted RBP8.23□□□□□ -1.09
UBXN1-212ENST00000531625 KRTAP3-2Q9BYR7 98 aa8.22□□□□□ -1.09
UBXN1-212ENST00000531625 TMEM258P61165 79 aa8.19□□□□□ -1.1
UBXN1-212ENST00000531625 SPRR2FQ96RM1 72 aa8.17□□□□□ -1.1
UBXN1-212ENST00000531625 SPRR2EP22531 72 aa8.16□□□□□ -1.1
UBXN1-212ENST00000531625 SPRR2BP35325 72 aa8.16□□□□□ -1.1
UBXN1-212ENST00000531625 SPRR2AP35326 72 aa8.16□□□□□ -1.1
UBXN1-212ENST00000531625 R4GN34 69 aa8.13□□□□□ -1.11
UBXN1-212ENST00000531625 M0QZ58 72 aa8.1□□□□□ -1.11
UBXN1-212ENST00000531625 KRTAP2-2Q9BYT5 123 aa8.07□□□□□ -1.12
UBXN1-212ENST00000531625 KRTAP2-1Q9BYU5 128 aa8.07□□□□□ -1.12
UBXN1-212ENST00000531625 SEC61GP60059 68 aa8.06□□□□□ -1.12
UBXN1-212ENST00000531625 PRO2289Q9P1D8 64 aa8.04□□□□□ -1.12
UBXN1-212ENST00000531625 PCP4P48539 62 aa8.02□□□□□ -1.13
UBXN1-212ENST00000531625 LCE1AQ5T7P2 110 aa8.02□□□□□ -1.13
UBXN1-212ENST00000531625 SERP1Q9Y6X1 66 aa8.02□□□□□ -1.13
UBXN1-212ENST00000531625 MT1XP80297 61 aa8□□□□□ -1.13
UBXN1-212ENST00000531625 KRTAP8-1Q8IUC2 63 aa8□□□□□ -1.13
UBXN1-212ENST00000531625 LINC01554Q52M75 96 aa7.98□□□□□ -1.13
UBXN1-212ENST00000531625 A0A1B0GU69 56 aa7.92□□□□□ -1.14
UBXN1-212ENST00000531625 KRTAP12-2P59991 146 aa7.92□□□□□ -1.14
UBXN1-212ENST00000531625 SPRR2DP22532 72 aa7.9□□□□□ -1.14
UBXN1-212ENST00000531625 PLAC4Q8WY50 150 aa7.88□□□□□ -1.15
UBXN1-212ENST00000531625 KRTAP13-4Q3LI77 160 aa7.87□□□□□ -1.15
UBXN1-212ENST00000531625 A0A1B0GU33 70 aa7.86□□□□□ -1.15
UBXN1-212ENST00000531625 PRR15LQ9BU68 103 aa7.82□□□□□ -1.16
UBXN1-212ENST00000531625 LINC01558Q9Y6Z2 57 aa7.82□□□□□ -1.16
UBXN1-212ENST00000531625 KRTAP4-8A0A0G2JLE6 195 aa7.78□□□□□ -1.16
UBXN1-212ENST00000531625 KRTAP4-8Q9BYQ9 185 aa7.78□□□□□ -1.16
UBXN1-212ENST00000531625 SPATA8Q6RVD6 105 aa7.77□□□□□ -1.17
UBXN1-212ENST00000531625 A0A0D9SG42 100 aa7.73□□□□□ -1.17
UBXN1-212ENST00000531625 LCE3BQ5TA77 95 aa7.72□□□□□ -1.17
UBXN1-212ENST00000531625 V9GYY9 64 aa7.66□□□□□ -1.18
UBXN1-212ENST00000531625 SMIM26A0A096LP01 95 aa7.64□□□□□ -1.19
UBXN1-212ENST00000531625 KRTAP10-7P60409 375 aaPredicted RBP7.61□□□□□ -1.19
UBXN1-212ENST00000531625 RPS28P62857 69 aaKnown RBP7.61□□□□□ -1.19
UBXN1-212ENST00000531625 Q1T7F1 81 aa7.61□□□□□ -1.19
UBXN1-212ENST00000531625 KRTAP10-12P60413 245 aa7.6□□□□□ -1.19
UBXN1-212ENST00000531625 GPR98Q8WXG9 6306 aa7.58□□□□□ -1.2
UBXN1-212ENST00000531625 A8MU10 97 aa7.58□□□□□ -1.2
UBXN1-212ENST00000531625 SPINT4Q6UDR6 99 aa7.58□□□□□ -1.2
UBXN1-212ENST00000531625 PSPHP1O15172 72 aa7.57□□□□□ -1.2
UBXN1-212ENST00000531625 UQCR11O14957 56 aa7.56□□□□□ -1.2
UBXN1-212ENST00000531625 CAMK2N1Q7Z7J9 78 aa7.56□□□□□ -1.2
UBXN1-212ENST00000531625 KRTAP12-1P59990 96 aa7.53□□□□□ -1.2
UBXN1-212ENST00000531625 MIR22HGQ0VDD5 57 aa7.44□□□□□ -1.22
UBXN1-212ENST00000531625 DSTQ03001 7570 aaKnown RBP7.42□□□□□ -1.22
UBXN1-212ENST00000531625 A6NED7 52 aa7.34□□□□□ -1.23
UBXN1-212ENST00000531625 KRTAP4-9Q9BYQ8 210 aa7.29□□□□□ -1.24
UBXN1-212ENST00000531625 LCE5AQ5TCM9 118 aa7.25□□□□□ -1.25
UBXN1-212ENST00000531625 K7ERS5 55 aa7.23□□□□□ -1.25
UBXN1-212ENST00000531625 KRTAP19-7Q3SYF9 63 aa7.16□□□□□ -1.26
UBXN1-212ENST00000531625 C10orf95Q9H7T3 257 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms