RNA–Protein interactions for RNA: ENST00000527698.1

LRRK1-206, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 2

Gene LRRK1, Length 679 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-206ENST00000527698 MT2AP02795 61 aa11.09□□□□□ -0.63
LRRK1-206ENST00000527698 CSAG1Q6PB30 78 aa11.08□□□□□ -0.64
LRRK1-206ENST00000527698 KRTAP10-10P60014 251 aa11.05□□□□□ -0.64
LRRK1-206ENST00000527698 LCA10Q71F78 164 aa11.05□□□□□ -0.64
LRRK1-206ENST00000527698 MT1FP04733 61 aa10.99□□□□□ -0.65
LRRK1-206ENST00000527698 SERP2Q8N6R1 65 aa10.99□□□□□ -0.65
LRRK1-206ENST00000527698 FCGBPQ9Y6R7 5405 aaPredicted RBP10.95□□□□□ -0.66
LRRK1-206ENST00000527698 NDUFC1O43677 76 aa10.94□□□□□ -0.66
LRRK1-206ENST00000527698 DMAC1Q96GE9 116 aa10.91□□□□□ -0.66
LRRK1-206ENST00000527698 KRTAP3-3Q9BYR6 98 aa10.91□□□□□ -0.66
LRRK1-206ENST00000527698 LCE2BO14633 110 aa10.86□□□□□ -0.67
LRRK1-206ENST00000527698 KRTAP19-1Q8IUB9 90 aa10.86□□□□□ -0.67
LRRK1-206ENST00000527698 KRTAP9-3Q9BYQ3 159 aa10.86□□□□□ -0.67
LRRK1-206ENST00000527698 C20orf197Q8N268 126 aa10.83□□□□□ -0.68
LRRK1-206ENST00000527698 SNURFQ9Y675 71 aa10.83□□□□□ -0.68
LRRK1-206ENST00000527698 ACYP2P14621 99 aa10.8□□□□□ -0.68
LRRK1-206ENST00000527698 COX7CP15954 63 aa10.77□□□□□ -0.69
LRRK1-206ENST00000527698 SPANXA2-OT1Q8N9U9 137 aa10.76□□□□□ -0.69
LRRK1-206ENST00000527698 H0YAA0 97 aa10.74□□□□□ -0.69
LRRK1-206ENST00000527698 MACF1Q9UPN3 7388 aaKnown RBP10.73□□□□□ -0.69
LRRK1-206ENST00000527698 SPTSSBQ8NFR3 76 aa10.65□□□□□ -0.7
LRRK1-206ENST00000527698 CRIPTQ9P021 101 aa10.64□□□□□ -0.71
LRRK1-206ENST00000527698 SYNE2Q8WXH0 6885 aaKnown RBP10.64□□□□□ -0.71
LRRK1-206ENST00000527698 ANAPC13Q9BS18 74 aa10.63□□□□□ -0.71
LRRK1-206ENST00000527698 KRTAP19-6Q3LI70 58 aa10.59□□□□□ -0.71
LRRK1-206ENST00000527698 CHKB-CPT1BH3BT56 60 aa10.57□□□□□ -0.72
LRRK1-206ENST00000527698 ADM2Q7Z4H4 148 aa10.53□□□□□ -0.72
LRRK1-206ENST00000527698 SPRR2GQ9BYE4 73 aa10.52□□□□□ -0.73
LRRK1-206ENST00000527698 H7BZZ5 65 aa10.47□□□□□ -0.73
LRRK1-206ENST00000527698 KRTAP6-3Q3LI67 103 aa10.37□□□□□ -0.75
LRRK1-206ENST00000527698 CYSTM1Q9H1C7 97 aa10.36□□□□□ -0.75
LRRK1-206ENST00000527698 KRTAP19-8Q3LI54 63 aa10.35□□□□□ -0.75
LRRK1-206ENST00000527698 Q5VV11 94 aa10.35□□□□□ -0.75
LRRK1-206ENST00000527698 COA5Q86WW8 74 aa10.34□□□□□ -0.75
LRRK1-206ENST00000527698 CCDC179H3BU77 68 aa10.3□□□□□ -0.76
LRRK1-206ENST00000527698 R4GN34 69 aa10.3□□□□□ -0.76
LRRK1-206ENST00000527698 P0C880 135 aa10.29□□□□□ -0.76
LRRK1-206ENST00000527698 KRTAP3-2Q9BYR7 98 aa10.29□□□□□ -0.76
LRRK1-206ENST00000527698 ATP5EP56381 51 aaPredicted RBP10.23□□□□□ -0.77
LRRK1-206ENST00000527698 MT1BP07438 61 aa10.21□□□□□ -0.77
LRRK1-206ENST00000527698 M0QZ58 72 aa10.18□□□□□ -0.78
LRRK1-206ENST00000527698 SEC61GP60059 68 aa10.14□□□□□ -0.79
LRRK1-206ENST00000527698 TMEM258P61165 79 aa10.08□□□□□ -0.8
LRRK1-206ENST00000527698 SERP1Q9Y6X1 66 aa10.07□□□□□ -0.8
LRRK1-206ENST00000527698 PLAC4Q8WY50 150 aa10.05□□□□□ -0.8
LRRK1-206ENST00000527698 NEBP20929 6669 aa10.04□□□□□ -0.8
LRRK1-206ENST00000527698 A6NN06 94 aa10.01□□□□□ -0.81
LRRK1-206ENST00000527698 LINC01554Q52M75 96 aa9.97□□□□□ -0.81
LRRK1-206ENST00000527698 KRTAP10-5P60370 271 aa9.95□□□□□ -0.82
LRRK1-206ENST00000527698 MUC12Q9UKN1 5478 aa9.94□□□□□ -0.82
LRRK1-206ENST00000527698 PRO2289Q9P1D8 64 aa9.9□□□□□ -0.82
LRRK1-206ENST00000527698 A0A1B0GU69 56 aa9.86□□□□□ -0.83
LRRK1-206ENST00000527698 A0A1B0GU33 70 aa9.83□□□□□ -0.84
LRRK1-206ENST00000527698 KRTAP20-1Q3LI63 56 aa9.79□□□□□ -0.84
LRRK1-206ENST00000527698 PRR15LQ9BU68 103 aa9.79□□□□□ -0.84
LRRK1-206ENST00000527698 KRTAP13-4Q3LI77 160 aa9.76□□□□□ -0.85
LRRK1-206ENST00000527698 KRTAP5-9P26371 169 aa9.72□□□□□ -0.85
LRRK1-206ENST00000527698 MT1XP80297 61 aa9.71□□□□□ -0.86
LRRK1-206ENST00000527698 LINC01558Q9Y6Z2 57 aa9.7□□□□□ -0.86
LRRK1-206ENST00000527698 SPATA8Q6RVD6 105 aa9.63□□□□□ -0.87
LRRK1-206ENST00000527698 PCP4P48539 62 aa9.62□□□□□ -0.87
LRRK1-206ENST00000527698 SMIM26A0A096LP01 95 aa9.61□□□□□ -0.87
LRRK1-206ENST00000527698 KMT2DO14686 5537 aa9.61□□□□□ -0.87
LRRK1-206ENST00000527698 MDN1Q9NU22 5596 aa9.59□□□□□ -0.87
LRRK1-206ENST00000527698 A0A0D9SG42 100 aa9.56□□□□□ -0.88
LRRK1-206ENST00000527698 V9GYY9 64 aa9.54□□□□□ -0.88
LRRK1-206ENST00000527698 CAMK2N1Q7Z7J9 78 aa9.53□□□□□ -0.88
LRRK1-206ENST00000527698 KRTAP12-2P59991 146 aa9.48□□□□□ -0.89
LRRK1-206ENST00000527698 UQCR11O14957 56 aa9.44□□□□□ -0.9
LRRK1-206ENST00000527698 KRTAP2-3P0C7H8 128 aa9.44□□□□□ -0.9
LRRK1-206ENST00000527698 SPINT4Q6UDR6 99 aa9.44□□□□□ -0.9
LRRK1-206ENST00000527698 KRTAP2-4Q9BYR9 128 aa9.44□□□□□ -0.9
LRRK1-206ENST00000527698 KRTAP12-1P59990 96 aa9.41□□□□□ -0.9
LRRK1-206ENST00000527698 Q1T7F1 81 aa9.41□□□□□ -0.9
LRRK1-206ENST00000527698 RPS28P62857 69 aaKnown RBP9.38□□□□□ -0.91
LRRK1-206ENST00000527698 A8MU10 97 aa9.33□□□□□ -0.92
LRRK1-206ENST00000527698 KRTAP10-12P60413 245 aa9.28□□□□□ -0.92
LRRK1-206ENST00000527698 SPRR2FQ96RM1 72 aa9.27□□□□□ -0.93
LRRK1-206ENST00000527698 SPRR2EP22531 72 aa9.24□□□□□ -0.93
LRRK1-206ENST00000527698 SPRR2BP35325 72 aa9.24□□□□□ -0.93
LRRK1-206ENST00000527698 SPRR2AP35326 72 aa9.24□□□□□ -0.93
LRRK1-206ENST00000527698 KRTAP10-7P60409 375 aaPredicted RBP9.24□□□□□ -0.93
LRRK1-206ENST00000527698 PSPHP1O15172 72 aa9.23□□□□□ -0.93
LRRK1-206ENST00000527698 MIR22HGQ0VDD5 57 aa9.21□□□□□ -0.94
LRRK1-206ENST00000527698 KRTAP8-1Q8IUC2 63 aa9.2□□□□□ -0.94
LRRK1-206ENST00000527698 KRTAP2-2Q9BYT5 123 aa9.11□□□□□ -0.95
LRRK1-206ENST00000527698 KRTAP2-1Q9BYU5 128 aa9.11□□□□□ -0.95
LRRK1-206ENST00000527698 KRTAP4-8A0A0G2JLE6 195 aa9.08□□□□□ -0.96
LRRK1-206ENST00000527698 LCE1AQ5T7P2 110 aa9.08□□□□□ -0.96
LRRK1-206ENST00000527698 KRTAP4-8Q9BYQ9 185 aa9.08□□□□□ -0.96
LRRK1-206ENST00000527698 K7ERS5 55 aa9.07□□□□□ -0.96
LRRK1-206ENST00000527698 A6NED7 52 aa9.01□□□□□ -0.97
LRRK1-206ENST00000527698 TNP1P09430 55 aa8.94□□□□□ -0.98
LRRK1-206ENST00000527698 SPRR2DP22532 72 aa8.94□□□□□ -0.98
LRRK1-206ENST00000527698 C10orf95Q9H7T3 257 aa8.93□□□□□ -0.98
LRRK1-206ENST00000527698 LCE3BQ5TA77 95 aa8.75□□□□□ -1.01
LRRK1-206ENST00000527698 CDC42SE1Q9NRR8 79 aa8.72□□□□□ -1.01
LRRK1-206ENST00000527698 KRTAP25-1Q3LHN0 102 aa8.69□□□□□ -1.02
LRRK1-206ENST00000527698 KRTAP19-7Q3SYF9 63 aa8.66□□□□□ -1.02
LRRK1-206ENST00000527698 LCE3AQ5TA76 89 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms