RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 KRTAP9-6A0A140TA67 174 aa10.23□□□□□ -0.77
SMCO4-203ENST00000526869 Q1T7F1 81 aa10.23□□□□□ -0.77
SMCO4-203ENST00000526869 S4R3F8 94 aa10.21□□□□□ -0.77
SMCO4-203ENST00000526869 KRTAP19-2Q3LHN2 52 aa10.17□□□□□ -0.78
SMCO4-203ENST00000526869 LCA10Q71F78 164 aa10.16□□□□□ -0.78
SMCO4-203ENST00000526869 LINC01558Q9Y6Z2 57 aa10.15□□□□□ -0.78
SMCO4-203ENST00000526869 KRTAP9-2Q9BYQ4 174 aa10.13□□□□□ -0.79
SMCO4-203ENST00000526869 KRTAP3-3Q9BYR6 98 aa10.13□□□□□ -0.79
SMCO4-203ENST00000526869 RNF213Q63HN8 5207 aa10.02□□□□□ -0.81
SMCO4-203ENST00000526869 PRR15LQ9BU68 103 aa10.01□□□□□ -0.81
SMCO4-203ENST00000526869 CSAG1Q6PB30 78 aa10□□□□□ -0.81
SMCO4-203ENST00000526869 A0A1B0GU69 56 aa9.97□□□□□ -0.81
SMCO4-203ENST00000526869 PSPHP1O15172 72 aa9.97□□□□□ -0.81
SMCO4-203ENST00000526869 SEC61GP60059 68 aa9.95□□□□□ -0.82
SMCO4-203ENST00000526869 MUC2Q02817 5179 aa9.95□□□□□ -0.82
SMCO4-203ENST00000526869 FLGP20930 4061 aaPredicted RBP9.95□□□□□ -0.82
SMCO4-203ENST00000526869 LCE2CQ5TA81 110 aa9.93□□□□□ -0.82
SMCO4-203ENST00000526869 Q5VV11 94 aa9.93□□□□□ -0.82
SMCO4-203ENST00000526869 H0YAA0 97 aa9.84□□□□□ -0.83
SMCO4-203ENST00000526869 KRTAP3-2Q9BYR7 98 aa9.78□□□□□ -0.84
SMCO4-203ENST00000526869 KRTAP10-6P60371 365 aaPredicted RBP9.75□□□□□ -0.85
SMCO4-203ENST00000526869 MT1HP80294 61 aa9.72□□□□□ -0.85
SMCO4-203ENST00000526869 ADM2Q7Z4H4 148 aa9.72□□□□□ -0.85
SMCO4-203ENST00000526869 A6NED7 52 aa9.7□□□□□ -0.86
SMCO4-203ENST00000526869 UQCR11O14957 56 aa9.69□□□□□ -0.86
SMCO4-203ENST00000526869 FAT4Q6V0I7 4981 aa9.69□□□□□ -0.86
SMCO4-203ENST00000526869 A0A1B0GU33 70 aa9.68□□□□□ -0.86
SMCO4-203ENST00000526869 P0C880 135 aa9.65□□□□□ -0.86
SMCO4-203ENST00000526869 M0R2T5 61 aa9.6□□□□□ -0.87
SMCO4-203ENST00000526869 SPATA8Q6RVD6 105 aa9.57□□□□□ -0.88
SMCO4-203ENST00000526869 CDC42SE1Q9NRR8 79 aa9.57□□□□□ -0.88
SMCO4-203ENST00000526869 MIR22HGQ0VDD5 57 aa9.56□□□□□ -0.88
SMCO4-203ENST00000526869 BRK1Q8WUW1 75 aa9.56□□□□□ -0.88
SMCO4-203ENST00000526869 M0QZ58 72 aa9.49□□□□□ -0.89
SMCO4-203ENST00000526869 KRTAP13-4Q3LI77 160 aa9.44□□□□□ -0.9
SMCO4-203ENST00000526869 CRIPTQ9P021 101 aa9.43□□□□□ -0.9
SMCO4-203ENST00000526869 A8MU10 97 aa9.4□□□□□ -0.9
SMCO4-203ENST00000526869 PRO0628Q9UI54 55 aa9.39□□□□□ -0.91
SMCO4-203ENST00000526869 R4GN34 69 aa9.39□□□□□ -0.91
SMCO4-203ENST00000526869 LORP23490 312 aaPredicted RBP9.38□□□□□ -0.91
SMCO4-203ENST00000526869 LCE2AQ5TA79 106 aaPredicted RBP9.38□□□□□ -0.91
SMCO4-203ENST00000526869 KRTAP9-8Q9BYQ0 159 aa9.37□□□□□ -0.91
SMCO4-203ENST00000526869 MT2AP02795 61 aa9.35□□□□□ -0.91
SMCO4-203ENST00000526869 FSIP2Q5CZC0 6907 aa9.35□□□□□ -0.91
SMCO4-203ENST00000526869 CRCT1Q9UGL9 99 aa9.34□□□□□ -0.91
SMCO4-203ENST00000526869 MT1FP04733 61 aa9.27□□□□□ -0.93
SMCO4-203ENST00000526869 KRTAP10-10P60014 251 aa9.25□□□□□ -0.93
SMCO4-203ENST00000526869 A0A0D9SG42 100 aa9.24□□□□□ -0.93
SMCO4-203ENST00000526869 SPRR2GQ9BYE4 73 aa9.19□□□□□ -0.94
SMCO4-203ENST00000526869 K7ERS5 55 aa9.17□□□□□ -0.94
SMCO4-203ENST00000526869 A6NN06 94 aa9.15□□□□□ -0.94
SMCO4-203ENST00000526869 LINC01554Q52M75 96 aa9.15□□□□□ -0.94
SMCO4-203ENST00000526869 KRTAP12-1P59990 96 aa9.13□□□□□ -0.95
SMCO4-203ENST00000526869 KRTAP19-1Q8IUB9 90 aa9.13□□□□□ -0.95
SMCO4-203ENST00000526869 KRTAP12-2P59991 146 aa9.07□□□□□ -0.96
SMCO4-203ENST00000526869 KRTAP9-7A8MTY7 169 aa9.05□□□□□ -0.96
SMCO4-203ENST00000526869 PMAIP1Q13794 54 aa9.04□□□□□ -0.96
SMCO4-203ENST00000526869 SPINT4Q6UDR6 99 aa9.04□□□□□ -0.96
SMCO4-203ENST00000526869 KRTAP9-3Q9BYQ3 159 aa9.04□□□□□ -0.96
SMCO4-203ENST00000526869 LCE2DQ5TA82 110 aaPredicted RBP8.99□□□□□ -0.97
SMCO4-203ENST00000526869 KRTAP19-8Q3LI54 63 aa8.97□□□□□ -0.97
SMCO4-203ENST00000526869 PLAC4Q8WY50 150 aa8.86□□□□□ -0.99
SMCO4-203ENST00000526869 MT1BP07438 61 aa8.8□□□□□ -1
SMCO4-203ENST00000526869 CAMK2N1Q7Z7J9 78 aa8.8□□□□□ -1
SMCO4-203ENST00000526869 ROMO1P60602 79 aa8.77□□□□□ -1.01
SMCO4-203ENST00000526869 LCE2BO14633 110 aa8.76□□□□□ -1.01
SMCO4-203ENST00000526869 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.75□□□□□ -1.01
SMCO4-203ENST00000526869 KTN1-AS1Q86SY8 53 aa8.7□□□□□ -1.02
SMCO4-203ENST00000526869 C10orf95Q9H7T3 257 aa8.62□□□□□ -1.03
SMCO4-203ENST00000526869 MT1XP80297 61 aa8.51□□□□□ -1.05
SMCO4-203ENST00000526869 SVIPQ8NHG7 77 aa8.51□□□□□ -1.05
SMCO4-203ENST00000526869 KRTAP10-5P60370 271 aa8.49□□□□□ -1.05
SMCO4-203ENST00000526869 KRTAP25-1Q3LHN0 102 aa8.47□□□□□ -1.05
SMCO4-203ENST00000526869 PRO2289Q9P1D8 64 aa8.47□□□□□ -1.05
SMCO4-203ENST00000526869 USH2AO75445 5202 aa8.46□□□□□ -1.06
SMCO4-203ENST00000526869 PRAC1Q96KF2 57 aa8.43□□□□□ -1.06
SMCO4-203ENST00000526869 TNP1P09430 55 aa8.4□□□□□ -1.06
SMCO4-203ENST00000526869 KRTAP19-6Q3LI70 58 aa8.29□□□□□ -1.08
SMCO4-203ENST00000526869 SSPOA2VEC9 5147 aa8.26□□□□□ -1.09
SMCO4-203ENST00000526869 KRTAP23-1A1A580 65 aa8.22□□□□□ -1.09
SMCO4-203ENST00000526869 SYNE2Q8WXH0 6885 aaKnown RBP8.22□□□□□ -1.09
SMCO4-203ENST00000526869 PP632Q6XCG6 107 aa8.19□□□□□ -1.1
SMCO4-203ENST00000526869 KRTAP10-7P60409 375 aaPredicted RBP8.12□□□□□ -1.11
SMCO4-203ENST00000526869 KRTAP10-12P60413 245 aa8.09□□□□□ -1.11
SMCO4-203ENST00000526869 MACF1Q9UPN3 7388 aaKnown RBP8.03□□□□□ -1.12
SMCO4-203ENST00000526869 LCE3AQ5TA76 89 aa8.01□□□□□ -1.13
SMCO4-203ENST00000526869 FCGBPQ9Y6R7 5405 aaPredicted RBP8□□□□□ -1.13
SMCO4-203ENST00000526869 KRTAP8-1Q8IUC2 63 aa7.9□□□□□ -1.14
SMCO4-203ENST00000526869 NEBP20929 6669 aa7.84□□□□□ -1.15
SMCO4-203ENST00000526869 KRTAP20-1Q3LI63 56 aa7.81□□□□□ -1.16
SMCO4-203ENST00000526869 KRTAP4-8A0A0G2JLE6 195 aa7.77□□□□□ -1.17
SMCO4-203ENST00000526869 KRTAP4-8Q9BYQ9 185 aa7.77□□□□□ -1.17
SMCO4-203ENST00000526869 KRTAP12-3P60328 96 aa7.72□□□□□ -1.17
SMCO4-203ENST00000526869 KRTAP6-3Q3LI67 103 aa7.72□□□□□ -1.17
SMCO4-203ENST00000526869 KRTAP19-5Q3LI72 72 aa7.66□□□□□ -1.18
SMCO4-203ENST00000526869 KRTAP19-7Q3SYF9 63 aa7.58□□□□□ -1.2
SMCO4-203ENST00000526869 KMT2DO14686 5537 aa7.57□□□□□ -1.2
SMCO4-203ENST00000526869 KRTAP15-1Q3LI76 137 aa7.56□□□□□ -1.2
SMCO4-203ENST00000526869 MUC12Q9UKN1 5478 aa7.52□□□□□ -1.21
SMCO4-203ENST00000526869 MT1EP04732 61 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms