RNA–Protein interactions for RNA: ENST00000524509.1

PACSIN3-202, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 554 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-202ENST00000524509 KLKP1Q107X0 134 aa8.47□□□□□ -1.05
PACSIN3-202ENST00000524509 MACF1Q9UPN3 7388 aaKnown RBP8.47□□□□□ -1.05
PACSIN3-202ENST00000524509 KRTAP19-1Q8IUB9 90 aa8.46□□□□□ -1.06
PACSIN3-202ENST00000524509 SERP2Q8N6R1 65 aa8.46□□□□□ -1.06
PACSIN3-202ENST00000524509 CSAG1Q6PB30 78 aa8.45□□□□□ -1.06
PACSIN3-202ENST00000524509 SYNE2Q8WXH0 6885 aaKnown RBP8.44□□□□□ -1.06
PACSIN3-202ENST00000524509 LCA10Q71F78 164 aa8.39□□□□□ -1.07
PACSIN3-202ENST00000524509 LCE2BO14633 110 aa8.37□□□□□ -1.07
PACSIN3-202ENST00000524509 NDUFC1O43677 76 aa8.36□□□□□ -1.07
PACSIN3-202ENST00000524509 MT2AP02795 61 aa8.35□□□□□ -1.07
PACSIN3-202ENST00000524509 KRTAP10-10P60014 251 aa8.35□□□□□ -1.07
PACSIN3-202ENST00000524509 C20orf197Q8N268 126 aa8.33□□□□□ -1.08
PACSIN3-202ENST00000524509 DMAC1Q96GE9 116 aa8.33□□□□□ -1.08
PACSIN3-202ENST00000524509 SNURFQ9Y675 71 aa8.31□□□□□ -1.08
PACSIN3-202ENST00000524509 COX7CP15954 63 aa8.3□□□□□ -1.08
PACSIN3-202ENST00000524509 ACYP2P14621 99 aa8.29□□□□□ -1.08
PACSIN3-202ENST00000524509 KRTAP9-3Q9BYQ3 159 aa8.29□□□□□ -1.08
PACSIN3-202ENST00000524509 MT1FP04733 61 aa8.28□□□□□ -1.08
PACSIN3-202ENST00000524509 SPANXA2-OT1Q8N9U9 137 aa8.27□□□□□ -1.09
PACSIN3-202ENST00000524509 KRTAP3-3Q9BYR6 98 aa8.26□□□□□ -1.09
PACSIN3-202ENST00000524509 ANAPC13Q9BS18 74 aa8.22□□□□□ -1.09
PACSIN3-202ENST00000524509 KRTAP19-6Q3LI70 58 aa8.19□□□□□ -1.1
PACSIN3-202ENST00000524509 SPTSSBQ8NFR3 76 aa8.19□□□□□ -1.1
PACSIN3-202ENST00000524509 H0YAA0 97 aa8.17□□□□□ -1.1
PACSIN3-202ENST00000524509 KRTAP6-3Q3LI67 103 aa8.15□□□□□ -1.1
PACSIN3-202ENST00000524509 CHKB-CPT1BH3BT56 60 aa8.14□□□□□ -1.11
PACSIN3-202ENST00000524509 CRIPTQ9P021 101 aa8.1□□□□□ -1.11
PACSIN3-202ENST00000524509 H7BZZ5 65 aa8.04□□□□□ -1.12
PACSIN3-202ENST00000524509 ADM2Q7Z4H4 148 aa8.02□□□□□ -1.13
PACSIN3-202ENST00000524509 NEBP20929 6669 aa7.97□□□□□ -1.13
PACSIN3-202ENST00000524509 SPRR2GQ9BYE4 73 aa7.95□□□□□ -1.14
PACSIN3-202ENST00000524509 CCDC179H3BU77 68 aa7.94□□□□□ -1.14
PACSIN3-202ENST00000524509 COA5Q86WW8 74 aa7.94□□□□□ -1.14
PACSIN3-202ENST00000524509 ATP5EP56381 51 aaPredicted RBP7.92□□□□□ -1.14
PACSIN3-202ENST00000524509 CYSTM1Q9H1C7 97 aa7.92□□□□□ -1.14
PACSIN3-202ENST00000524509 Q5VV11 94 aa7.85□□□□□ -1.15
PACSIN3-202ENST00000524509 R4GN34 69 aa7.85□□□□□ -1.15
PACSIN3-202ENST00000524509 P0C880 135 aa7.82□□□□□ -1.16
PACSIN3-202ENST00000524509 KRTAP19-8Q3LI54 63 aa7.82□□□□□ -1.16
PACSIN3-202ENST00000524509 MUC12Q9UKN1 5478 aa7.81□□□□□ -1.16
PACSIN3-202ENST00000524509 SEC61GP60059 68 aa7.81□□□□□ -1.16
PACSIN3-202ENST00000524509 KRTAP3-2Q9BYR7 98 aa7.81□□□□□ -1.16
PACSIN3-202ENST00000524509 TMEM258P61165 79 aa7.8□□□□□ -1.16
PACSIN3-202ENST00000524509 KRTAP20-1Q3LI63 56 aa7.8□□□□□ -1.16
PACSIN3-202ENST00000524509 M0QZ58 72 aa7.76□□□□□ -1.17
PACSIN3-202ENST00000524509 SERP1Q9Y6X1 66 aa7.75□□□□□ -1.17
PACSIN3-202ENST00000524509 MT1BP07438 61 aa7.69□□□□□ -1.18
PACSIN3-202ENST00000524509 PLAC4Q8WY50 150 aa7.65□□□□□ -1.18
PACSIN3-202ENST00000524509 PCP4P48539 62 aa7.64□□□□□ -1.19
PACSIN3-202ENST00000524509 LINC01554Q52M75 96 aa7.6□□□□□ -1.19
PACSIN3-202ENST00000524509 A0A1B0GU69 56 aa7.59□□□□□ -1.19
PACSIN3-202ENST00000524509 A6NN06 94 aa7.59□□□□□ -1.19
PACSIN3-202ENST00000524509 KRTAP5-9P26371 169 aa7.56□□□□□ -1.2
PACSIN3-202ENST00000524509 PRR15LQ9BU68 103 aa7.56□□□□□ -1.2
PACSIN3-202ENST00000524509 A0A1B0GU33 70 aa7.53□□□□□ -1.2
PACSIN3-202ENST00000524509 PRO2289Q9P1D8 64 aa7.53□□□□□ -1.2
PACSIN3-202ENST00000524509 MDN1Q9NU22 5596 aa7.52□□□□□ -1.2
PACSIN3-202ENST00000524509 KMT2DO14686 5537 aa7.52□□□□□ -1.21
PACSIN3-202ENST00000524509 KRTAP10-5P60370 271 aa7.5□□□□□ -1.21
PACSIN3-202ENST00000524509 KRTAP2-3P0C7H8 128 aa7.46□□□□□ -1.22
PACSIN3-202ENST00000524509 KRTAP2-4Q9BYR9 128 aa7.46□□□□□ -1.22
PACSIN3-202ENST00000524509 LINC01558Q9Y6Z2 57 aa7.46□□□□□ -1.22
PACSIN3-202ENST00000524509 KRTAP13-4Q3LI77 160 aa7.41□□□□□ -1.22
PACSIN3-202ENST00000524509 V9GYY9 64 aa7.4□□□□□ -1.22
PACSIN3-202ENST00000524509 SMIM26A0A096LP01 95 aa7.39□□□□□ -1.23
PACSIN3-202ENST00000524509 SPATA8Q6RVD6 105 aa7.35□□□□□ -1.23
PACSIN3-202ENST00000524509 A0A0D9SG42 100 aa7.32□□□□□ -1.24
PACSIN3-202ENST00000524509 MT1XP80297 61 aa7.32□□□□□ -1.24
PACSIN3-202ENST00000524509 CAMK2N1Q7Z7J9 78 aa7.29□□□□□ -1.24
PACSIN3-202ENST00000524509 RPS28P62857 69 aaKnown RBP7.28□□□□□ -1.24
PACSIN3-202ENST00000524509 UQCR11O14957 56 aa7.27□□□□□ -1.25
PACSIN3-202ENST00000524509 Q1T7F1 81 aa7.26□□□□□ -1.25
PACSIN3-202ENST00000524509 SPINT4Q6UDR6 99 aa7.23□□□□□ -1.25
PACSIN3-202ENST00000524509 SPRR2EP22531 72 aa7.2□□□□□ -1.26
PACSIN3-202ENST00000524509 SPRR2BP35325 72 aa7.2□□□□□ -1.26
PACSIN3-202ENST00000524509 SPRR2AP35326 72 aa7.2□□□□□ -1.26
PACSIN3-202ENST00000524509 KRTAP2-2Q9BYT5 123 aa7.19□□□□□ -1.26
PACSIN3-202ENST00000524509 KRTAP2-1Q9BYU5 128 aa7.19□□□□□ -1.26
PACSIN3-202ENST00000524509 KRTAP12-1P59990 96 aa7.17□□□□□ -1.26
PACSIN3-202ENST00000524509 KRTAP12-2P59991 146 aa7.17□□□□□ -1.26
PACSIN3-202ENST00000524509 SPRR2FQ96RM1 72 aa7.17□□□□□ -1.26
PACSIN3-202ENST00000524509 A8MU10 97 aa7.13□□□□□ -1.27
PACSIN3-202ENST00000524509 PSPHP1O15172 72 aa7.12□□□□□ -1.27
PACSIN3-202ENST00000524509 MIR22HGQ0VDD5 57 aa7.1□□□□□ -1.27
PACSIN3-202ENST00000524509 LCE1AQ5T7P2 110 aa7.04□□□□□ -1.28
PACSIN3-202ENST00000524509 K7ERS5 55 aa7.03□□□□□ -1.28
PACSIN3-202ENST00000524509 KRTAP10-12P60413 245 aa7□□□□□ -1.29
PACSIN3-202ENST00000524509 A6NED7 52 aa6.97□□□□□ -1.29
PACSIN3-202ENST00000524509 SPRR2DP22532 72 aa6.97□□□□□ -1.29
PACSIN3-202ENST00000524509 KRTAP8-1Q8IUC2 63 aa6.97□□□□□ -1.29
PACSIN3-202ENST00000524509 KRTAP10-7P60409 375 aaPredicted RBP6.96□□□□□ -1.3
PACSIN3-202ENST00000524509 GPR98Q8WXG9 6306 aa6.88□□□□□ -1.31
PACSIN3-202ENST00000524509 TNP1P09430 55 aa6.84□□□□□ -1.31
PACSIN3-202ENST00000524509 KRTAP4-8A0A0G2JLE6 195 aa6.83□□□□□ -1.32
PACSIN3-202ENST00000524509 LCE3BQ5TA77 95 aa6.83□□□□□ -1.32
PACSIN3-202ENST00000524509 KRTAP4-8Q9BYQ9 185 aa6.83□□□□□ -1.32
PACSIN3-202ENST00000524509 C10orf95Q9H7T3 257 aa6.79□□□□□ -1.32
PACSIN3-202ENST00000524509 CDC42SE1Q9NRR8 79 aa6.75□□□□□ -1.33
PACSIN3-202ENST00000524509 KRTAP25-1Q3LHN0 102 aa6.66□□□□□ -1.34
PACSIN3-202ENST00000524509 DSTQ03001 7570 aaKnown RBP6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms