RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-222ENST00000524006 A8MUN3 132 aa5.88□□□□□ -1.47
SPIDR-222ENST00000524006 Q75L30 129 aa5.87□□□□□ -1.47
SPIDR-222ENST00000524006 MT1HL1P0DM35 61 aa5.86□□□□□ -1.47
SPIDR-222ENST00000524006 KRTAP9-2Q9BYQ4 174 aa5.86□□□□□ -1.47
SPIDR-222ENST00000524006 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.85□□□□□ -1.47
SPIDR-222ENST00000524006 ATP11AUNQ6ZP68 121 aa5.85□□□□□ -1.47
SPIDR-222ENST00000524006 SPTSSBQ8NFR3 76 aa5.85□□□□□ -1.47
SPIDR-222ENST00000524006 PRO0628Q9UI54 55 aa5.84□□□□□ -1.47
SPIDR-222ENST00000524006 LINC01558Q9Y6Z2 57 aa5.84□□□□□ -1.47
SPIDR-222ENST00000524006 KRTAP9-6A0A140TA67 174 aa5.83□□□□□ -1.48
SPIDR-222ENST00000524006 A6NED7 52 aa5.81□□□□□ -1.48
SPIDR-222ENST00000524006 SPINK7P58062 85 aa5.8□□□□□ -1.48
SPIDR-222ENST00000524006 Q5VV11 94 aa5.8□□□□□ -1.48
SPIDR-222ENST00000524006 LPAP08519 4548 aa5.79□□□□□ -1.48
SPIDR-222ENST00000524006 A0A1B0GU69 56 aa5.78□□□□□ -1.48
SPIDR-222ENST00000524006 RPL37P61927 97 aaKnown RBP5.78□□□□□ -1.48
SPIDR-222ENST00000524006 KRTAP4-12Q9BQ66 201 aa5.77□□□□□ -1.49
SPIDR-222ENST00000524006 SEC61GP60059 68 aa5.75□□□□□ -1.49
SPIDR-222ENST00000524006 H3BS24 57 aa5.74□□□□□ -1.49
SPIDR-222ENST00000524006 LCE3BQ5TA77 95 aa5.73□□□□□ -1.49
SPIDR-222ENST00000524006 KRTAP19-1Q8IUB9 90 aa5.7□□□□□ -1.5
SPIDR-222ENST00000524006 MUC2Q02817 5179 aa5.69□□□□□ -1.5
SPIDR-222ENST00000524006 COX6B2Q6YFQ2 88 aa5.69□□□□□ -1.5
SPIDR-222ENST00000524006 TPRXLQ17RH7 258 aa5.67□□□□□ -1.5
SPIDR-222ENST00000524006 CDC42SE1Q9NRR8 79 aa5.67□□□□□ -1.5
SPIDR-222ENST00000524006 UQCR11O14957 56 aa5.62□□□□□ -1.51
SPIDR-222ENST00000524006 RBM12B-AS1Q9P1G2 102 aa5.59□□□□□ -1.51
SPIDR-222ENST00000524006 MIR22HGQ0VDD5 57 aa5.58□□□□□ -1.52
SPIDR-222ENST00000524006 LCA10Q71F78 164 aa5.58□□□□□ -1.52
SPIDR-222ENST00000524006 S4R3F8 94 aa5.58□□□□□ -1.52
SPIDR-222ENST00000524006 PMAIP1Q13794 54 aa5.57□□□□□ -1.52
SPIDR-222ENST00000524006 KRTAP3-1Q9BYR8 98 aa5.57□□□□□ -1.52
SPIDR-222ENST00000524006 SEC61BP60468 96 aaKnown RBP5.56□□□□□ -1.52
SPIDR-222ENST00000524006 KRTAP9-9Q9BYP9 154 aa5.56□□□□□ -1.52
SPIDR-222ENST00000524006 KRTAP9-4Q9BYQ2 154 aa5.56□□□□□ -1.52
SPIDR-222ENST00000524006 FAT4Q6V0I7 4981 aa5.54□□□□□ -1.52
SPIDR-222ENST00000524006 A8MU10 97 aa5.52□□□□□ -1.53
SPIDR-222ENST00000524006 MUC17Q685J3 4493 aa5.52□□□□□ -1.53
SPIDR-222ENST00000524006 H1FX-AS1Q4G0G2 97 aa5.51□□□□□ -1.53
SPIDR-222ENST00000524006 KRTAP4-8A0A0G2JLE6 195 aa5.5□□□□□ -1.53
SPIDR-222ENST00000524006 SPATA8Q6RVD6 105 aa5.5□□□□□ -1.53
SPIDR-222ENST00000524006 A0A1B0GU33 70 aa5.48□□□□□ -1.53
SPIDR-222ENST00000524006 KRTAP19-4Q3LI73 84 aa5.46□□□□□ -1.54
SPIDR-222ENST00000524006 A6NN06 94 aa5.42□□□□□ -1.54
SPIDR-222ENST00000524006 K7ERS5 55 aa5.42□□□□□ -1.54
SPIDR-222ENST00000524006 KTN1-AS1Q86SY8 53 aa5.41□□□□□ -1.54
SPIDR-222ENST00000524006 CSAG1Q6PB30 78 aa5.4□□□□□ -1.54
SPIDR-222ENST00000524006 H0YAA0 97 aa5.36□□□□□ -1.55
SPIDR-222ENST00000524006 LCE1DQ5T752 114 aa5.35□□□□□ -1.55
SPIDR-222ENST00000524006 ADM2Q7Z4H4 148 aa5.33□□□□□ -1.56
SPIDR-222ENST00000524006 KRTAP4-7Q9BYR0 210 aa5.31□□□□□ -1.56
SPIDR-222ENST00000524006 LCE4AQ5TA78 99 aa5.29□□□□□ -1.56
SPIDR-222ENST00000524006 KRTAP10-6P60371 365 aaPredicted RBP5.26□□□□□ -1.57
SPIDR-222ENST00000524006 A0A0D9SG42 100 aa5.25□□□□□ -1.57
SPIDR-222ENST00000524006 P0C880 135 aa5.24□□□□□ -1.57
SPIDR-222ENST00000524006 FSIP2Q5CZC0 6907 aa5.24□□□□□ -1.57
SPIDR-222ENST00000524006 M0QZ58 72 aa5.21□□□□□ -1.58
SPIDR-222ENST00000524006 KRTAP9-7A8MTY7 169 aa5.2□□□□□ -1.58
SPIDR-222ENST00000524006 KRTAP4-9Q9BYQ8 210 aa5.2□□□□□ -1.58
SPIDR-222ENST00000524006 KRTAP4-1Q9BYQ7 146 aa5.19□□□□□ -1.58
SPIDR-222ENST00000524006 KRTAP13-4Q3LI77 160 aa5.16□□□□□ -1.58
SPIDR-222ENST00000524006 R4GN34 69 aa5.16□□□□□ -1.58
SPIDR-222ENST00000524006 PRAC1Q96KF2 57 aa5.15□□□□□ -1.59
SPIDR-222ENST00000524006 SPINT4Q6UDR6 99 aa5.13□□□□□ -1.59
SPIDR-222ENST00000524006 CRCT1Q9UGL9 99 aa5.11□□□□□ -1.59
SPIDR-222ENST00000524006 ROMO1P60602 79 aa5.1□□□□□ -1.59
SPIDR-222ENST00000524006 LINC01554Q52M75 96 aa5.09□□□□□ -1.59
SPIDR-222ENST00000524006 KRTAP4-2Q9BYR5 136 aa5.06□□□□□ -1.6
SPIDR-222ENST00000524006 KRTAP19-2Q3LHN2 52 aa5.04□□□□□ -1.6
SPIDR-222ENST00000524006 KRTAP12-1P59990 96 aa5.03□□□□□ -1.6
SPIDR-222ENST00000524006 KRTAP12-2P59991 146 aa5.03□□□□□ -1.6
SPIDR-222ENST00000524006 FLGP20930 4061 aaPredicted RBP5.02□□□□□ -1.61
SPIDR-222ENST00000524006 LCE5AQ5TCM9 118 aa5.02□□□□□ -1.61
SPIDR-222ENST00000524006 M0R2T5 61 aa5.01□□□□□ -1.61
SPIDR-222ENST00000524006 KRTAP9-3Q9BYQ3 159 aa5.01□□□□□ -1.61
SPIDR-222ENST00000524006 KRTAP4-11Q9BYQ6 195 aa5.01□□□□□ -1.61
SPIDR-222ENST00000524006 MT1HP80294 61 aa5□□□□□ -1.61
SPIDR-222ENST00000524006 CRIPTQ9P021 101 aa5□□□□□ -1.61
SPIDR-222ENST00000524006 KRTAP25-1Q3LHN0 102 aa4.98□□□□□ -1.61
SPIDR-222ENST00000524006 CAMK2N1Q7Z7J9 78 aa4.91□□□□□ -1.62
SPIDR-222ENST00000524006 SSPOA2VEC9 5147 aa4.87□□□□□ -1.63
SPIDR-222ENST00000524006 USH2AO75445 5202 aa4.85□□□□□ -1.63
SPIDR-222ENST00000524006 KRTAP23-1A1A580 65 aa4.84□□□□□ -1.63
SPIDR-222ENST00000524006 PLAC4Q8WY50 150 aa4.79□□□□□ -1.64
SPIDR-222ENST00000524006 A0A0A0MQY5 61 aa4.78□□□□□ -1.64
SPIDR-222ENST00000524006 C10orf95Q9H7T3 257 aa4.78□□□□□ -1.64
SPIDR-222ENST00000524006 KRTAP10-10P60014 251 aa4.77□□□□□ -1.65
SPIDR-222ENST00000524006 FCGBPQ9Y6R7 5405 aaPredicted RBP4.75□□□□□ -1.65
SPIDR-222ENST00000524006 SPRR2GQ9BYE4 73 aa4.71□□□□□ -1.66
SPIDR-222ENST00000524006 KRTAP9-8Q9BYQ0 159 aa4.71□□□□□ -1.66
SPIDR-222ENST00000524006 MT2AP02795 61 aa4.7□□□□□ -1.66
SPIDR-222ENST00000524006 TNP1P09430 55 aa4.67□□□□□ -1.66
SPIDR-222ENST00000524006 PP632Q6XCG6 107 aa4.67□□□□□ -1.66
SPIDR-222ENST00000524006 SYNE2Q8WXH0 6885 aaKnown RBP4.66□□□□□ -1.66
SPIDR-222ENST00000524006 MT1FP04733 61 aa4.66□□□□□ -1.66
SPIDR-222ENST00000524006 MACF1Q9UPN3 7388 aaKnown RBP4.66□□□□□ -1.66
SPIDR-222ENST00000524006 KRTAP19-8Q3LI54 63 aa4.55□□□□□ -1.68
SPIDR-222ENST00000524006 KRTAP5-3Q6L8H2 238 aa4.48□□□□□ -1.69
SPIDR-222ENST00000524006 PRO2289Q9P1D8 64 aa4.48□□□□□ -1.69
SPIDR-222ENST00000524006 KRTAP19-6Q3LI70 58 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms