RNA–Protein interactions for RNA: ENST00000522719.2

NKX2-1-204, Transcript of NK2 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-1, Length 1,417 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-204ENST00000522719 ACYP2P14621 99 aa12.46□□□□□ -0.41
NKX2-1-204ENST00000522719 LCA10Q71F78 164 aa12.45□□□□□ -0.42
NKX2-1-204ENST00000522719 KRTAP3-3Q9BYR6 98 aa12.35□□□□□ -0.43
NKX2-1-204ENST00000522719 CSAG1Q6PB30 78 aa12.34□□□□□ -0.43
NKX2-1-204ENST00000522719 KRTAP10-6P60371 365 aaPredicted RBP12.33□□□□□ -0.44
NKX2-1-204ENST00000522719 PCP4P48539 62 aa12.32□□□□□ -0.44
NKX2-1-204ENST00000522719 LORP23490 312 aaPredicted RBP12.28□□□□□ -0.44
NKX2-1-204ENST00000522719 ATP5EP56381 51 aaPredicted RBP12.27□□□□□ -0.45
NKX2-1-204ENST00000522719 TMEM258P61165 79 aa12.25□□□□□ -0.45
NKX2-1-204ENST00000522719 CHKB-CPT1BH3BT56 60 aa12.23□□□□□ -0.45
NKX2-1-204ENST00000522719 COA5Q86WW8 74 aa12.18□□□□□ -0.46
NKX2-1-204ENST00000522719 SPTSSBQ8NFR3 76 aa12.16□□□□□ -0.46
NKX2-1-204ENST00000522719 KRTAP9-8Q9BYQ0 159 aa12.15□□□□□ -0.46
NKX2-1-204ENST00000522719 MT2AP02795 61 aa12.05□□□□□ -0.48
NKX2-1-204ENST00000522719 H0YAA0 97 aa12.03□□□□□ -0.48
NKX2-1-204ENST00000522719 CRCT1Q9UGL9 99 aa12.02□□□□□ -0.49
NKX2-1-204ENST00000522719 FSIP2Q5CZC0 6907 aa12□□□□□ -0.49
NKX2-1-204ENST00000522719 LCE2DQ5TA82 110 aaPredicted RBP11.97□□□□□ -0.49
NKX2-1-204ENST00000522719 MT1FP04733 61 aa11.96□□□□□ -0.49
NKX2-1-204ENST00000522719 KRTAP10-10P60014 251 aa11.95□□□□□ -0.5
NKX2-1-204ENST00000522719 ADM2Q7Z4H4 148 aa11.87□□□□□ -0.51
NKX2-1-204ENST00000522719 SERP1Q9Y6X1 66 aa11.86□□□□□ -0.51
NKX2-1-204ENST00000522719 KRTAP3-2Q9BYR7 98 aa11.76□□□□□ -0.53
NKX2-1-204ENST00000522719 KRTAP9-3Q9BYQ3 159 aa11.75□□□□□ -0.53
NKX2-1-204ENST00000522719 CRIPTQ9P021 101 aa11.73□□□□□ -0.53
NKX2-1-204ENST00000522719 P0C880 135 aa11.7□□□□□ -0.54
NKX2-1-204ENST00000522719 SEC61GP60059 68 aa11.68□□□□□ -0.54
NKX2-1-204ENST00000522719 RPS28P62857 69 aaKnown RBP11.6□□□□□ -0.55
NKX2-1-204ENST00000522719 SPRR2GQ9BYE4 73 aa11.57□□□□□ -0.56
NKX2-1-204ENST00000522719 A0A1B0GU69 56 aa11.55□□□□□ -0.56
NKX2-1-204ENST00000522719 KRTAP19-1Q8IUB9 90 aa11.55□□□□□ -0.56
NKX2-1-204ENST00000522719 LINC01558Q9Y6Z2 57 aa11.55□□□□□ -0.56
NKX2-1-204ENST00000522719 R4GN34 69 aa11.52□□□□□ -0.56
NKX2-1-204ENST00000522719 LCE2BO14633 110 aa11.48□□□□□ -0.57
NKX2-1-204ENST00000522719 SMIM26A0A096LP01 95 aa11.47□□□□□ -0.57
NKX2-1-204ENST00000522719 PRR15LQ9BU68 103 aa11.47□□□□□ -0.57
NKX2-1-204ENST00000522719 M0QZ58 72 aa11.46□□□□□ -0.57
NKX2-1-204ENST00000522719 V9GYY9 64 aa11.43□□□□□ -0.58
NKX2-1-204ENST00000522719 Q1T7F1 81 aa11.39□□□□□ -0.59
NKX2-1-204ENST00000522719 A0A1B0GU33 70 aa11.38□□□□□ -0.59
NKX2-1-204ENST00000522719 KRTAP9-7A8MTY7 169 aa11.35□□□□□ -0.59
NKX2-1-204ENST00000522719 KRTAP19-8Q3LI54 63 aa11.35□□□□□ -0.59
NKX2-1-204ENST00000522719 Q5VV11 94 aa11.3□□□□□ -0.6
NKX2-1-204ENST00000522719 USH2AO75445 5202 aa11.27□□□□□ -0.6
NKX2-1-204ENST00000522719 KRTAP13-4Q3LI77 160 aa11.26□□□□□ -0.61
NKX2-1-204ENST00000522719 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.23□□□□□ -0.61
NKX2-1-204ENST00000522719 LINC01554Q52M75 96 aa11.23□□□□□ -0.61
NKX2-1-204ENST00000522719 MT1BP07438 61 aa11.21□□□□□ -0.61
NKX2-1-204ENST00000522719 SPATA8Q6RVD6 105 aa11.18□□□□□ -0.62
NKX2-1-204ENST00000522719 PSPHP1O15172 72 aa11.18□□□□□ -0.62
NKX2-1-204ENST00000522719 UQCR11O14957 56 aa11.11□□□□□ -0.63
NKX2-1-204ENST00000522719 A6NN06 94 aa11.1□□□□□ -0.63
NKX2-1-204ENST00000522719 PLAC4Q8WY50 150 aa11.08□□□□□ -0.64
NKX2-1-204ENST00000522719 A0A0D9SG42 100 aa11.01□□□□□ -0.65
NKX2-1-204ENST00000522719 SSPOA2VEC9 5147 aa10.99□□□□□ -0.65
NKX2-1-204ENST00000522719 KRTAP19-6Q3LI70 58 aa10.97□□□□□ -0.65
NKX2-1-204ENST00000522719 A8MU10 97 aa10.92□□□□□ -0.66
NKX2-1-204ENST00000522719 MIR22HGQ0VDD5 57 aa10.92□□□□□ -0.66
NKX2-1-204ENST00000522719 A6NED7 52 aa10.86□□□□□ -0.67
NKX2-1-204ENST00000522719 KRTAP12-1P59990 96 aa10.84□□□□□ -0.67
NKX2-1-204ENST00000522719 SPINT4Q6UDR6 99 aa10.83□□□□□ -0.68
NKX2-1-204ENST00000522719 KRTAP10-5P60370 271 aa10.79□□□□□ -0.68
NKX2-1-204ENST00000522719 KRTAP12-2P59991 146 aa10.76□□□□□ -0.69
NKX2-1-204ENST00000522719 PRO2289Q9P1D8 64 aa10.75□□□□□ -0.69
NKX2-1-204ENST00000522719 MT1XP80297 61 aa10.72□□□□□ -0.69
NKX2-1-204ENST00000522719 CAMK2N1Q7Z7J9 78 aa10.72□□□□□ -0.69
NKX2-1-204ENST00000522719 FCGBPQ9Y6R7 5405 aaPredicted RBP10.68□□□□□ -0.7
NKX2-1-204ENST00000522719 CDC42SE1Q9NRR8 79 aa10.6□□□□□ -0.71
NKX2-1-204ENST00000522719 K7ERS5 55 aa10.58□□□□□ -0.72
NKX2-1-204ENST00000522719 SYNE2Q8WXH0 6885 aaKnown RBP10.57□□□□□ -0.72
NKX2-1-204ENST00000522719 MACF1Q9UPN3 7388 aaKnown RBP10.53□□□□□ -0.72
NKX2-1-204ENST00000522719 BRK1Q8WUW1 75 aa10.3□□□□□ -0.76
NKX2-1-204ENST00000522719 C10orf95Q9H7T3 257 aa10.29□□□□□ -0.76
NKX2-1-204ENST00000522719 KRTAP10-7P60409 375 aaPredicted RBP10.24□□□□□ -0.77
NKX2-1-204ENST00000522719 KRTAP10-12P60413 245 aa10.21□□□□□ -0.78
NKX2-1-204ENST00000522719 KRTAP6-3Q3LI67 103 aa10.2□□□□□ -0.78
NKX2-1-204ENST00000522719 TNP1P09430 55 aa10.12□□□□□ -0.79
NKX2-1-204ENST00000522719 ROMO1P60602 79 aa10□□□□□ -0.81
NKX2-1-204ENST00000522719 KRTAP25-1Q3LHN0 102 aa9.99□□□□□ -0.81
NKX2-1-204ENST00000522719 KRTAP4-8A0A0G2JLE6 195 aa9.97□□□□□ -0.81
NKX2-1-204ENST00000522719 KRTAP4-8Q9BYQ9 185 aa9.97□□□□□ -0.81
NKX2-1-204ENST00000522719 NEBP20929 6669 aa9.95□□□□□ -0.82
NKX2-1-204ENST00000522719 KMT2DO14686 5537 aa9.92□□□□□ -0.82
NKX2-1-204ENST00000522719 KRTAP8-1Q8IUC2 63 aa9.91□□□□□ -0.82
NKX2-1-204ENST00000522719 KRTAP20-1Q3LI63 56 aa9.86□□□□□ -0.83
NKX2-1-204ENST00000522719 PRO0628Q9UI54 55 aa9.8□□□□□ -0.84
NKX2-1-204ENST00000522719 KRTAP5-9P26371 169 aa9.77□□□□□ -0.85
NKX2-1-204ENST00000522719 PMAIP1Q13794 54 aa9.75□□□□□ -0.85
NKX2-1-204ENST00000522719 MUC12Q9UKN1 5478 aa9.75□□□□□ -0.85
NKX2-1-204ENST00000522719 LCE3AQ5TA76 89 aa9.74□□□□□ -0.85
NKX2-1-204ENST00000522719 KRTAP23-1A1A580 65 aa9.69□□□□□ -0.86
NKX2-1-204ENST00000522719 SPRR2FQ96RM1 72 aa9.66□□□□□ -0.86
NKX2-1-204ENST00000522719 KRTAP19-7Q3SYF9 63 aa9.57□□□□□ -0.88
NKX2-1-204ENST00000522719 KRTAP19-5Q3LI72 72 aa9.55□□□□□ -0.88
NKX2-1-204ENST00000522719 PP632Q6XCG6 107 aa9.53□□□□□ -0.88
NKX2-1-204ENST00000522719 MT1EP04732 61 aa9.44□□□□□ -0.9
NKX2-1-204ENST00000522719 KRTAP12-3P60328 96 aa9.4□□□□□ -0.9
NKX2-1-204ENST00000522719 KRTAP2-3P0C7H8 128 aa9.39□□□□□ -0.91
NKX2-1-204ENST00000522719 KRTAP2-4Q9BYR9 128 aa9.39□□□□□ -0.91
NKX2-1-204ENST00000522719 MDN1Q9NU22 5596 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms