RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 KLKP1Q107X0 134 aa8.72□□□□□ -1.01
VEGFA-222ENST00000520948 SMIM20Q8N5G0 67 aa8.71□□□□□ -1.02
VEGFA-222ENST00000520948 KRTAP9-3Q9BYQ3 159 aa8.71□□□□□ -1.02
VEGFA-222ENST00000520948 TRAV7A0A075B6U4 112 aa8.69□□□□□ -1.02
VEGFA-222ENST00000520948 MACF1Q9UPN3 7388 aaKnown RBP8.64□□□□□ -1.03
VEGFA-222ENST00000520948 S4R3F8 94 aa8.62□□□□□ -1.03
VEGFA-222ENST00000520948 LCA10Q71F78 164 aa8.6□□□□□ -1.03
VEGFA-222ENST00000520948 SYNE2Q8WXH0 6885 aaKnown RBP8.58□□□□□ -1.04
VEGFA-222ENST00000520948 KRTAP3-3Q9BYR6 98 aa8.57□□□□□ -1.04
VEGFA-222ENST00000520948 A8MUN3 132 aa8.56□□□□□ -1.04
VEGFA-222ENST00000520948 SERP2Q8N6R1 65 aa8.54□□□□□ -1.04
VEGFA-222ENST00000520948 CSAG1Q6PB30 78 aa8.52□□□□□ -1.05
VEGFA-222ENST00000520948 KRTAP19-6Q3LI70 58 aa8.49□□□□□ -1.05
VEGFA-222ENST00000520948 DMAC1Q96GE9 116 aa8.47□□□□□ -1.05
VEGFA-222ENST00000520948 SNURFQ9Y675 71 aa8.46□□□□□ -1.06
VEGFA-222ENST00000520948 C20orf197Q8N268 126 aa8.43□□□□□ -1.06
VEGFA-222ENST00000520948 NDUFC1O43677 76 aa8.4□□□□□ -1.06
VEGFA-222ENST00000520948 COX7CP15954 63 aa8.39□□□□□ -1.07
VEGFA-222ENST00000520948 SPANXA2-OT1Q8N9U9 137 aa8.33□□□□□ -1.08
VEGFA-222ENST00000520948 ACYP2P14621 99 aa8.32□□□□□ -1.08
VEGFA-222ENST00000520948 H0YAA0 97 aa8.3□□□□□ -1.08
VEGFA-222ENST00000520948 KRTAP6-3Q3LI67 103 aa8.3□□□□□ -1.08
VEGFA-222ENST00000520948 ANAPC13Q9BS18 74 aa8.25□□□□□ -1.09
VEGFA-222ENST00000520948 CYSTM1Q9H1C7 97 aa8.22□□□□□ -1.09
VEGFA-222ENST00000520948 SVIPQ8NHG7 77 aa8.21□□□□□ -1.1
VEGFA-222ENST00000520948 H7BZZ5 65 aa8.19□□□□□ -1.1
VEGFA-222ENST00000520948 PCP4P48539 62 aa8.19□□□□□ -1.1
VEGFA-222ENST00000520948 SPRR2GQ9BYE4 73 aa8.17□□□□□ -1.1
VEGFA-222ENST00000520948 ADM2Q7Z4H4 148 aa8.16□□□□□ -1.1
VEGFA-222ENST00000520948 CRIPTQ9P021 101 aa8.15□□□□□ -1.1
VEGFA-222ENST00000520948 CCDC179H3BU77 68 aa8.12□□□□□ -1.11
VEGFA-222ENST00000520948 SPTSSBQ8NFR3 76 aa8.11□□□□□ -1.11
VEGFA-222ENST00000520948 CHKB-CPT1BH3BT56 60 aa8.1□□□□□ -1.11
VEGFA-222ENST00000520948 NEBP20929 6669 aa8.09□□□□□ -1.11
VEGFA-222ENST00000520948 KRTAP3-2Q9BYR7 98 aa8.09□□□□□ -1.11
VEGFA-222ENST00000520948 KRTAP19-8Q3LI54 63 aa8.07□□□□□ -1.12
VEGFA-222ENST00000520948 P0C880 135 aa8.06□□□□□ -1.12
VEGFA-222ENST00000520948 COA5Q86WW8 74 aa8.04□□□□□ -1.12
VEGFA-222ENST00000520948 MT1BP07438 61 aa8.02□□□□□ -1.13
VEGFA-222ENST00000520948 A6NN06 94 aa8□□□□□ -1.13
VEGFA-222ENST00000520948 MUC12Q9UKN1 5478 aa7.98□□□□□ -1.13
VEGFA-222ENST00000520948 Q5VV11 94 aa7.96□□□□□ -1.14
VEGFA-222ENST00000520948 R4GN34 69 aa7.9□□□□□ -1.14
VEGFA-222ENST00000520948 KRTAP20-1Q3LI63 56 aa7.89□□□□□ -1.15
VEGFA-222ENST00000520948 ATP5EP56381 51 aaPredicted RBP7.87□□□□□ -1.15
VEGFA-222ENST00000520948 M0QZ58 72 aa7.86□□□□□ -1.15
VEGFA-222ENST00000520948 KRTAP10-5P60370 271 aa7.83□□□□□ -1.16
VEGFA-222ENST00000520948 TMEM258P61165 79 aa7.81□□□□□ -1.16
VEGFA-222ENST00000520948 KRTAP5-9P26371 169 aa7.77□□□□□ -1.17
VEGFA-222ENST00000520948 SEC61GP60059 68 aa7.71□□□□□ -1.18
VEGFA-222ENST00000520948 SERP1Q9Y6X1 66 aa7.71□□□□□ -1.18
VEGFA-222ENST00000520948 KMT2DO14686 5537 aa7.7□□□□□ -1.18
VEGFA-222ENST00000520948 KRTAP13-4Q3LI77 160 aa7.7□□□□□ -1.18
VEGFA-222ENST00000520948 LINC01554Q52M75 96 aa7.69□□□□□ -1.18
VEGFA-222ENST00000520948 PLAC4Q8WY50 150 aa7.69□□□□□ -1.18
VEGFA-222ENST00000520948 MDN1Q9NU22 5596 aa7.68□□□□□ -1.18
VEGFA-222ENST00000520948 A0A1B0GU69 56 aa7.6□□□□□ -1.19
VEGFA-222ENST00000520948 MT1XP80297 61 aa7.6□□□□□ -1.19
VEGFA-222ENST00000520948 A0A1B0GU33 70 aa7.59□□□□□ -1.19
VEGFA-222ENST00000520948 KRTAP2-3P0C7H8 128 aa7.56□□□□□ -1.2
VEGFA-222ENST00000520948 KRTAP2-4Q9BYR9 128 aa7.56□□□□□ -1.2
VEGFA-222ENST00000520948 LINC01558Q9Y6Z2 57 aa7.56□□□□□ -1.2
VEGFA-222ENST00000520948 SPATA8Q6RVD6 105 aa7.53□□□□□ -1.2
VEGFA-222ENST00000520948 PRO2289Q9P1D8 64 aa7.53□□□□□ -1.2
VEGFA-222ENST00000520948 SPRR2FQ96RM1 72 aa7.51□□□□□ -1.21
VEGFA-222ENST00000520948 SPRR2EP22531 72 aa7.48□□□□□ -1.21
VEGFA-222ENST00000520948 SPRR2BP35325 72 aa7.48□□□□□ -1.21
VEGFA-222ENST00000520948 SPRR2AP35326 72 aa7.48□□□□□ -1.21
VEGFA-222ENST00000520948 PRR15LQ9BU68 103 aa7.46□□□□□ -1.22
VEGFA-222ENST00000520948 A0A0D9SG42 100 aa7.42□□□□□ -1.22
VEGFA-222ENST00000520948 SMIM26A0A096LP01 95 aa7.36□□□□□ -1.23
VEGFA-222ENST00000520948 KRTAP12-1P59990 96 aa7.36□□□□□ -1.23
VEGFA-222ENST00000520948 KRTAP12-2P59991 146 aa7.35□□□□□ -1.23
VEGFA-222ENST00000520948 KRTAP8-1Q8IUC2 63 aa7.35□□□□□ -1.23
VEGFA-222ENST00000520948 A8MU10 97 aa7.32□□□□□ -1.24
VEGFA-222ENST00000520948 Q1T7F1 81 aa7.32□□□□□ -1.24
VEGFA-222ENST00000520948 LCE1AQ5T7P2 110 aa7.32□□□□□ -1.24
VEGFA-222ENST00000520948 RPS28P62857 69 aaKnown RBP7.3□□□□□ -1.24
VEGFA-222ENST00000520948 SPINT4Q6UDR6 99 aa7.3□□□□□ -1.24
VEGFA-222ENST00000520948 V9GYY9 64 aa7.3□□□□□ -1.24
VEGFA-222ENST00000520948 CAMK2N1Q7Z7J9 78 aa7.29□□□□□ -1.24
VEGFA-222ENST00000520948 KRTAP2-2Q9BYT5 123 aa7.29□□□□□ -1.24
VEGFA-222ENST00000520948 KRTAP2-1Q9BYU5 128 aa7.29□□□□□ -1.24
VEGFA-222ENST00000520948 UQCR11O14957 56 aa7.26□□□□□ -1.25
VEGFA-222ENST00000520948 KRTAP10-7P60409 375 aaPredicted RBP7.25□□□□□ -1.25
VEGFA-222ENST00000520948 SPRR2DP22532 72 aa7.24□□□□□ -1.25
VEGFA-222ENST00000520948 KRTAP10-12P60413 245 aa7.24□□□□□ -1.25
VEGFA-222ENST00000520948 KRTAP4-8A0A0G2JLE6 195 aa7.2□□□□□ -1.26
VEGFA-222ENST00000520948 KRTAP4-8Q9BYQ9 185 aa7.2□□□□□ -1.26
VEGFA-222ENST00000520948 PSPHP1O15172 72 aa7.19□□□□□ -1.26
VEGFA-222ENST00000520948 MIR22HGQ0VDD5 57 aa7.12□□□□□ -1.27
VEGFA-222ENST00000520948 LCE3BQ5TA77 95 aa7.06□□□□□ -1.28
VEGFA-222ENST00000520948 C10orf95Q9H7T3 257 aa7.02□□□□□ -1.29
VEGFA-222ENST00000520948 A6NED7 52 aa6.95□□□□□ -1.3
VEGFA-222ENST00000520948 K7ERS5 55 aa6.86□□□□□ -1.31
VEGFA-222ENST00000520948 TNP1P09430 55 aa6.86□□□□□ -1.31
VEGFA-222ENST00000520948 GPR98Q8WXG9 6306 aa6.83□□□□□ -1.32
VEGFA-222ENST00000520948 KRTAP19-7Q3SYF9 63 aa6.8□□□□□ -1.32
VEGFA-222ENST00000520948 CDC42SE1Q9NRR8 79 aa6.77□□□□□ -1.33
VEGFA-222ENST00000520948 PRO0628Q9UI54 55 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms