RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 LOC101927531A0A1B0GV80 90 aa4.06□□□□□ -1.76
SDCBP-206ENST00000519115 ZCCHC13Q8WW36 166 aaKnown RBP4.06□□□□□ -1.76
SDCBP-206ENST00000519115 KRTAP3-1Q9BYR8 98 aa4.06□□□□□ -1.76
SDCBP-206ENST00000519115 H0Y9P7 68 aa4.05□□□□□ -1.76
SDCBP-206ENST00000519115 RPL37P61927 97 aaKnown RBP4.04□□□□□ -1.76
SDCBP-206ENST00000519115 ATP11AUNQ6ZP68 121 aa4.04□□□□□ -1.76
SDCBP-206ENST00000519115 C20orf197Q8N268 126 aa4.04□□□□□ -1.76
SDCBP-206ENST00000519115 C1orf64Q8NEQ6 169 aa4.04□□□□□ -1.76
SDCBP-206ENST00000519115 CCDC179H3BU77 68 aa4.03□□□□□ -1.76
SDCBP-206ENST00000519115 Q5W150 140 aa4.03□□□□□ -1.76
SDCBP-206ENST00000519115 LINC00208Q96KT6 92 aa4.03□□□□□ -1.76
SDCBP-206ENST00000519115 SPANXA2-OT1Q8N9U9 137 aa4.02□□□□□ -1.77
SDCBP-206ENST00000519115 CYP4F30PQ9H0H9 118 aa4.02□□□□□ -1.77
SDCBP-206ENST00000519115 H7BZZ5 65 aa4□□□□□ -1.77
SDCBP-206ENST00000519115 IGKV2-30P06310 120 aa4□□□□□ -1.77
SDCBP-206ENST00000519115 ATP5EP56381 51 aaPredicted RBP4□□□□□ -1.77
SDCBP-206ENST00000519115 TMEM258P61165 79 aa3.99□□□□□ -1.77
SDCBP-206ENST00000519115 C7orf65Q6ZTY9 151 aa3.98□□□□□ -1.77
SDCBP-206ENST00000519115 SNURFQ9Y675 71 aa3.98□□□□□ -1.77
SDCBP-206ENST00000519115 SSPOA2VEC9 5147 aa3.96□□□□□ -1.78
SDCBP-206ENST00000519115 KRTAP19-2Q3LHN2 52 aa3.95□□□□□ -1.78
SDCBP-206ENST00000519115 GPR98Q8WXG9 6306 aa3.94□□□□□ -1.78
SDCBP-206ENST00000519115 A8MUN3 132 aa3.94□□□□□ -1.78
SDCBP-206ENST00000519115 SPINK7P58062 85 aa3.94□□□□□ -1.78
SDCBP-206ENST00000519115 MPLKIPQ8TAP9 179 aa3.94□□□□□ -1.78
SDCBP-206ENST00000519115 RPS28P62857 69 aaKnown RBP3.92□□□□□ -1.78
SDCBP-206ENST00000519115 NEBP20929 6669 aa3.92□□□□□ -1.78
SDCBP-206ENST00000519115 IGKV2D-30A0A075B6S6 120 aa3.91□□□□□ -1.78
SDCBP-206ENST00000519115 COX6B2Q6YFQ2 88 aa3.91□□□□□ -1.78
SDCBP-206ENST00000519115 CYSTM1Q9H1C7 97 aa3.91□□□□□ -1.78
SDCBP-206ENST00000519115 HRES1P13985 223 aa3.9□□□□□ -1.79
SDCBP-206ENST00000519115 FAM236DA0A1B0GTK5 79 aa3.89□□□□□ -1.79
SDCBP-206ENST00000519115 FAM236CP0DP71 79 aa3.89□□□□□ -1.79
SDCBP-206ENST00000519115 ACYP2P14621 99 aa3.89□□□□□ -1.79
SDCBP-206ENST00000519115 MT1HP80294 61 aa3.89□□□□□ -1.79
SDCBP-206ENST00000519115 DMAC1Q96GE9 116 aa3.89□□□□□ -1.79
SDCBP-206ENST00000519115 SERP1Q9Y6X1 66 aa3.87□□□□□ -1.79
SDCBP-206ENST00000519115 M0R2T5 61 aa3.84□□□□□ -1.79
SDCBP-206ENST00000519115 RBM12B-AS1Q9P1G2 102 aa3.84□□□□□ -1.79
SDCBP-206ENST00000519115 SYNE2Q8WXH0 6885 aaKnown RBP3.84□□□□□ -1.8
SDCBP-206ENST00000519115 C4orf26Q17RF5 130 aa3.82□□□□□ -1.8
SDCBP-206ENST00000519115 FLGP20930 4061 aaPredicted RBP3.81□□□□□ -1.8
SDCBP-206ENST00000519115 KRTAP10-6P60371 365 aaPredicted RBP3.8□□□□□ -1.8
SDCBP-206ENST00000519115 SPTSSBQ8NFR3 76 aa3.8□□□□□ -1.8
SDCBP-206ENST00000519115 H1FX-AS1Q4G0G2 97 aa3.79□□□□□ -1.8
SDCBP-206ENST00000519115 COA5Q86WW8 74 aa3.78□□□□□ -1.8
SDCBP-206ENST00000519115 SMIM26A0A096LP01 95 aa3.77□□□□□ -1.81
SDCBP-206ENST00000519115 V9GYY9 64 aa3.77□□□□□ -1.81
SDCBP-206ENST00000519115 CHKB-CPT1BH3BT56 60 aa3.75□□□□□ -1.81
SDCBP-206ENST00000519115 KRTAP20-1Q3LI63 56 aa3.74□□□□□ -1.81
SDCBP-206ENST00000519115 Q1T7F1 81 aa3.73□□□□□ -1.81
SDCBP-206ENST00000519115 CSAG1Q6PB30 78 aa3.7□□□□□ -1.82
SDCBP-206ENST00000519115 S4R3F8 94 aa3.7□□□□□ -1.82
SDCBP-206ENST00000519115 KRTAP15-1Q3LI76 137 aa3.69□□□□□ -1.82
SDCBP-206ENST00000519115 LINC01558Q9Y6Z2 57 aa3.69□□□□□ -1.82
SDCBP-206ENST00000519115 H0YAA0 97 aa3.68□□□□□ -1.82
SDCBP-206ENST00000519115 LCA10Q71F78 164 aa3.67□□□□□ -1.82
SDCBP-206ENST00000519115 MT2AP02795 61 aa3.66□□□□□ -1.82
SDCBP-206ENST00000519115 PRR15LQ9BU68 103 aa3.66□□□□□ -1.82
SDCBP-206ENST00000519115 SEC61GP60059 68 aa3.65□□□□□ -1.83
SDCBP-206ENST00000519115 MT1FP04733 61 aa3.64□□□□□ -1.83
SDCBP-206ENST00000519115 KRTAP10-10P60014 251 aa3.62□□□□□ -1.83
SDCBP-206ENST00000519115 MACF1Q9UPN3 7388 aaKnown RBP3.6□□□□□ -1.83
SDCBP-206ENST00000519115 A0A1B0GU69 56 aa3.6□□□□□ -1.83
SDCBP-206ENST00000519115 USH2AO75445 5202 aa3.55□□□□□ -1.84
SDCBP-206ENST00000519115 CRIPTQ9P021 101 aa3.55□□□□□ -1.84
SDCBP-206ENST00000519115 M0QZ58 72 aa3.54□□□□□ -1.84
SDCBP-206ENST00000519115 UQCR11O14957 56 aa3.54□□□□□ -1.84
SDCBP-206ENST00000519115 Q5VV11 94 aa3.54□□□□□ -1.84
SDCBP-206ENST00000519115 FCGBPQ9Y6R7 5405 aaPredicted RBP3.53□□□□□ -1.84
SDCBP-206ENST00000519115 A0A1B0GU33 70 aa3.52□□□□□ -1.85
SDCBP-206ENST00000519115 PSPHP1O15172 72 aa3.52□□□□□ -1.85
SDCBP-206ENST00000519115 KMT2DO14686 5537 aa3.52□□□□□ -1.85
SDCBP-206ENST00000519115 ADM2Q7Z4H4 148 aa3.51□□□□□ -1.85
SDCBP-206ENST00000519115 SPATA8Q6RVD6 105 aa3.5□□□□□ -1.85
SDCBP-206ENST00000519115 MUC12Q9UKN1 5478 aa3.49□□□□□ -1.85
SDCBP-206ENST00000519115 P0C880 135 aa3.47□□□□□ -1.85
SDCBP-206ENST00000519115 A6NED7 52 aa3.46□□□□□ -1.86
SDCBP-206ENST00000519115 CDC42SE1Q9NRR8 79 aa3.45□□□□□ -1.86
SDCBP-206ENST00000519115 MIR22HGQ0VDD5 57 aa3.44□□□□□ -1.86
SDCBP-206ENST00000519115 A6NN06 94 aa3.43□□□□□ -1.86
SDCBP-206ENST00000519115 R4GN34 69 aa3.43□□□□□ -1.86
SDCBP-206ENST00000519115 PRAC1Q96KF2 57 aa3.42□□□□□ -1.86
SDCBP-206ENST00000519115 KRTAP6-3Q3LI67 103 aa3.41□□□□□ -1.86
SDCBP-206ENST00000519115 SPRR2GQ9BYE4 73 aa3.41□□□□□ -1.86
SDCBP-206ENST00000519115 KRTAP19-6Q3LI70 58 aa3.39□□□□□ -1.87
SDCBP-206ENST00000519115 K7ERS5 55 aa3.37□□□□□ -1.87
SDCBP-206ENST00000519115 PRO0628Q9UI54 55 aa3.37□□□□□ -1.87
SDCBP-206ENST00000519115 AHNAK2Q8IVF2 5795 aa3.36□□□□□ -1.87
SDCBP-206ENST00000519115 MT1BP07438 61 aa3.36□□□□□ -1.87
SDCBP-206ENST00000519115 KRTAP13-4Q3LI77 160 aa3.36□□□□□ -1.87
SDCBP-206ENST00000519115 BRK1Q8WUW1 75 aa3.36□□□□□ -1.87
SDCBP-206ENST00000519115 KRTAP19-8Q3LI54 63 aa3.35□□□□□ -1.87
SDCBP-206ENST00000519115 KRTAP2-3P0C7H8 128 aa3.3□□□□□ -1.88
SDCBP-206ENST00000519115 KRTAP2-4Q9BYR9 128 aa3.3□□□□□ -1.88
SDCBP-206ENST00000519115 A8MU10 97 aa3.29□□□□□ -1.88
SDCBP-206ENST00000519115 KRTAP12-1P59990 96 aa3.29□□□□□ -1.88
SDCBP-206ENST00000519115 A0A0D9SG42 100 aa3.27□□□□□ -1.89
SDCBP-206ENST00000519115 PLAC4Q8WY50 150 aa3.27□□□□□ -1.89
SDCBP-206ENST00000519115 LINC01554Q52M75 96 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms