RNA–Protein interactions for RNA: ENST00000517921.1

PABPC1-203, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 885 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-203ENST00000517921 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.43□□□□□ -1.54
PABPC1-203ENST00000517921 C4orf26Q17RF5 130 aa5.4□□□□□ -1.54
PABPC1-203ENST00000517921 MPLKIPQ8TAP9 179 aa5.4□□□□□ -1.54
PABPC1-203ENST00000517921 SMIM26A0A096LP01 95 aa5.38□□□□□ -1.55
PABPC1-203ENST00000517921 SPANXA2-OT1Q8N9U9 137 aa5.38□□□□□ -1.55
PABPC1-203ENST00000517921 COX6B2Q6YFQ2 88 aa5.36□□□□□ -1.55
PABPC1-203ENST00000517921 KRTAP4-12Q9BQ66 201 aa5.35□□□□□ -1.55
PABPC1-203ENST00000517921 LCE3BQ5TA77 95 aa5.34□□□□□ -1.55
PABPC1-203ENST00000517921 DMAC1Q96GE9 116 aa5.34□□□□□ -1.55
PABPC1-203ENST00000517921 KRTAP3-1Q9BYR8 98 aa5.34□□□□□ -1.55
PABPC1-203ENST00000517921 RBM12B-AS1Q9P1G2 102 aa5.34□□□□□ -1.55
PABPC1-203ENST00000517921 FAT4Q6V0I7 4981 aa5.33□□□□□ -1.56
PABPC1-203ENST00000517921 KRTAP19-2Q3LHN2 52 aa5.33□□□□□ -1.56
PABPC1-203ENST00000517921 A8MUN3 132 aa5.3□□□□□ -1.56
PABPC1-203ENST00000517921 FLGP20930 4061 aaPredicted RBP5.27□□□□□ -1.57
PABPC1-203ENST00000517921 ACYP2P14621 99 aa5.26□□□□□ -1.57
PABPC1-203ENST00000517921 H1FX-AS1Q4G0G2 97 aa5.26□□□□□ -1.57
PABPC1-203ENST00000517921 KRTAP19-1Q8IUB9 90 aa5.26□□□□□ -1.57
PABPC1-203ENST00000517921 COA5Q86WW8 74 aa5.23□□□□□ -1.57
PABPC1-203ENST00000517921 Q1T7F1 81 aa5.21□□□□□ -1.58
PABPC1-203ENST00000517921 S4R3F8 94 aa5.2□□□□□ -1.58
PABPC1-203ENST00000517921 V9GYY9 64 aa5.2□□□□□ -1.58
PABPC1-203ENST00000517921 LCA10Q71F78 164 aa5.19□□□□□ -1.58
PABPC1-203ENST00000517921 CHKB-CPT1BH3BT56 60 aa5.17□□□□□ -1.58
PABPC1-203ENST00000517921 KRTAP9-9Q9BYP9 154 aa5.17□□□□□ -1.58
PABPC1-203ENST00000517921 KRTAP9-4Q9BYQ2 154 aa5.17□□□□□ -1.58
PABPC1-203ENST00000517921 PRO0628Q9UI54 55 aa5.16□□□□□ -1.58
PABPC1-203ENST00000517921 MT1HP80294 61 aa5.13□□□□□ -1.59
PABPC1-203ENST00000517921 M0R2T5 61 aa5.11□□□□□ -1.59
PABPC1-203ENST00000517921 KRTAP4-8A0A0G2JLE6 195 aa5.1□□□□□ -1.59
PABPC1-203ENST00000517921 SPTSSBQ8NFR3 76 aa5.09□□□□□ -1.59
PABPC1-203ENST00000517921 CSAG1Q6PB30 78 aa5.07□□□□□ -1.6
PABPC1-203ENST00000517921 BRK1Q8WUW1 75 aa5.05□□□□□ -1.6
PABPC1-203ENST00000517921 KRTAP10-6P60371 365 aaPredicted RBP5.03□□□□□ -1.6
PABPC1-203ENST00000517921 PSPHP1O15172 72 aa5.01□□□□□ -1.61
PABPC1-203ENST00000517921 LCE1DQ5T752 114 aa5□□□□□ -1.61
PABPC1-203ENST00000517921 Q5VV11 94 aa5□□□□□ -1.61
PABPC1-203ENST00000517921 LINC01558Q9Y6Z2 57 aa5□□□□□ -1.61
PABPC1-203ENST00000517921 KRTAP19-4Q3LI73 84 aa4.98□□□□□ -1.61
PABPC1-203ENST00000517921 CRCT1Q9UGL9 99 aa4.98□□□□□ -1.61
PABPC1-203ENST00000517921 H0YAA0 97 aa4.97□□□□□ -1.61
PABPC1-203ENST00000517921 PRR15LQ9BU68 103 aa4.97□□□□□ -1.61
PABPC1-203ENST00000517921 FSIP2Q5CZC0 6907 aa4.96□□□□□ -1.61
PABPC1-203ENST00000517921 ADM2Q7Z4H4 148 aa4.94□□□□□ -1.62
PABPC1-203ENST00000517921 KRTAP4-7Q9BYR0 210 aa4.94□□□□□ -1.62
PABPC1-203ENST00000517921 KRTAP9-8Q9BYQ0 159 aa4.93□□□□□ -1.62
PABPC1-203ENST00000517921 A0A1B0GU69 56 aa4.92□□□□□ -1.62
PABPC1-203ENST00000517921 P0C880 135 aa4.91□□□□□ -1.62
PABPC1-203ENST00000517921 SEC61GP60059 68 aa4.91□□□□□ -1.62
PABPC1-203ENST00000517921 MT2AP02795 61 aa4.9□□□□□ -1.63
PABPC1-203ENST00000517921 A6NED7 52 aa4.89□□□□□ -1.63
PABPC1-203ENST00000517921 H3BS24 57 aa4.89□□□□□ -1.63
PABPC1-203ENST00000517921 CDC42SE1Q9NRR8 79 aa4.89□□□□□ -1.63
PABPC1-203ENST00000517921 MT1FP04733 61 aa4.88□□□□□ -1.63
PABPC1-203ENST00000517921 KRTAP9-7A8MTY7 169 aa4.87□□□□□ -1.63
PABPC1-203ENST00000517921 KRTAP10-10P60014 251 aa4.83□□□□□ -1.64
PABPC1-203ENST00000517921 KRTAP4-9Q9BYQ8 210 aa4.83□□□□□ -1.64
PABPC1-203ENST00000517921 A0A1B0GU33 70 aa4.81□□□□□ -1.64
PABPC1-203ENST00000517921 PMAIP1Q13794 54 aa4.81□□□□□ -1.64
PABPC1-203ENST00000517921 KRTAP13-4Q3LI77 160 aa4.79□□□□□ -1.64
PABPC1-203ENST00000517921 LCE4AQ5TA78 99 aa4.79□□□□□ -1.64
PABPC1-203ENST00000517921 CRIPTQ9P021 101 aa4.78□□□□□ -1.64
PABPC1-203ENST00000517921 A8MU10 97 aa4.76□□□□□ -1.65
PABPC1-203ENST00000517921 M0QZ58 72 aa4.76□□□□□ -1.65
PABPC1-203ENST00000517921 KRTAP9-3Q9BYQ3 159 aa4.76□□□□□ -1.65
PABPC1-203ENST00000517921 R4GN34 69 aa4.76□□□□□ -1.65
PABPC1-203ENST00000517921 A6NN06 94 aa4.75□□□□□ -1.65
PABPC1-203ENST00000517921 UQCR11O14957 56 aa4.75□□□□□ -1.65
PABPC1-203ENST00000517921 SPATA8Q6RVD6 105 aa4.75□□□□□ -1.65
PABPC1-203ENST00000517921 SPRR2GQ9BYE4 73 aa4.74□□□□□ -1.65
PABPC1-203ENST00000517921 KTN1-AS1Q86SY8 53 aa4.72□□□□□ -1.65
PABPC1-203ENST00000517921 KRTAP4-2Q9BYR5 136 aa4.7□□□□□ -1.66
PABPC1-203ENST00000517921 MIR22HGQ0VDD5 57 aa4.69□□□□□ -1.66
PABPC1-203ENST00000517921 USH2AO75445 5202 aa4.68□□□□□ -1.66
PABPC1-203ENST00000517921 LINC01554Q52M75 96 aa4.66□□□□□ -1.66
PABPC1-203ENST00000517921 KRTAP4-11Q9BYQ6 195 aa4.66□□□□□ -1.66
PABPC1-203ENST00000517921 A0A0D9SG42 100 aa4.65□□□□□ -1.67
PABPC1-203ENST00000517921 KRTAP19-8Q3LI54 63 aa4.65□□□□□ -1.67
PABPC1-203ENST00000517921 LCE5AQ5TCM9 118 aa4.64□□□□□ -1.67
PABPC1-203ENST00000517921 SSPOA2VEC9 5147 aa4.63□□□□□ -1.67
PABPC1-203ENST00000517921 MT1BP07438 61 aa4.6□□□□□ -1.67
PABPC1-203ENST00000517921 KRTAP12-1P59990 96 aa4.59□□□□□ -1.67
PABPC1-203ENST00000517921 KRTAP12-2P59991 146 aa4.57□□□□□ -1.68
PABPC1-203ENST00000517921 FCGBPQ9Y6R7 5405 aaPredicted RBP4.55□□□□□ -1.68
PABPC1-203ENST00000517921 SPINT4Q6UDR6 99 aa4.55□□□□□ -1.68
PABPC1-203ENST00000517921 PLAC4Q8WY50 150 aa4.52□□□□□ -1.69
PABPC1-203ENST00000517921 KRTAP19-6Q3LI70 58 aa4.5□□□□□ -1.69
PABPC1-203ENST00000517921 K7ERS5 55 aa4.48□□□□□ -1.69
PABPC1-203ENST00000517921 MACF1Q9UPN3 7388 aaKnown RBP4.45□□□□□ -1.7
PABPC1-203ENST00000517921 CAMK2N1Q7Z7J9 78 aa4.44□□□□□ -1.7
PABPC1-203ENST00000517921 MT1XP80297 61 aa4.42□□□□□ -1.7
PABPC1-203ENST00000517921 SYNE2Q8WXH0 6885 aaKnown RBP4.42□□□□□ -1.7
PABPC1-203ENST00000517921 KRTAP10-5P60370 271 aa4.4□□□□□ -1.71
PABPC1-203ENST00000517921 PRAC1Q96KF2 57 aa4.4□□□□□ -1.71
PABPC1-203ENST00000517921 C10orf95Q9H7T3 257 aa4.35□□□□□ -1.71
PABPC1-203ENST00000517921 PRO2289Q9P1D8 64 aa4.35□□□□□ -1.71
PABPC1-203ENST00000517921 KRTAP6-3Q3LI67 103 aa4.32□□□□□ -1.72
PABPC1-203ENST00000517921 ROMO1P60602 79 aa4.31□□□□□ -1.72
PABPC1-203ENST00000517921 KRTAP25-1Q3LHN0 102 aa4.3□□□□□ -1.72
PABPC1-203ENST00000517921 KRTAP10-7P60409 375 aaPredicted RBP4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms