RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 CYSTM1Q9H1C7 97 aa4.73□□□□□ -1.65
CLN8-202ENST00000517514 S4R3F8 94 aa4.72□□□□□ -1.65
CLN8-202ENST00000517514 MT2AP02795 61 aa4.71□□□□□ -1.66
CLN8-202ENST00000517514 DMAC1Q96GE9 116 aa4.71□□□□□ -1.66
CLN8-202ENST00000517514 A8MUN3 132 aa4.7□□□□□ -1.66
CLN8-202ENST00000517514 ANAPC13Q9BS18 74 aa4.7□□□□□ -1.66
CLN8-202ENST00000517514 MT1FP04733 61 aa4.68□□□□□ -1.66
CLN8-202ENST00000517514 CCDC179H3BU77 68 aa4.67□□□□□ -1.66
CLN8-202ENST00000517514 H7BZZ5 65 aa4.65□□□□□ -1.67
CLN8-202ENST00000517514 SPANXA2-OT1Q8N9U9 137 aa4.65□□□□□ -1.67
CLN8-202ENST00000517514 CSAG1Q6PB30 78 aa4.63□□□□□ -1.67
CLN8-202ENST00000517514 KRTAP4-8Q9BYQ9 185 aa4.61□□□□□ -1.67
CLN8-202ENST00000517514 KRTAP9-3Q9BYQ3 159 aa4.6□□□□□ -1.67
CLN8-202ENST00000517514 NDUFC1O43677 76 aa4.59□□□□□ -1.67
CLN8-202ENST00000517514 ACYP2P14621 99 aa4.59□□□□□ -1.67
CLN8-202ENST00000517514 KRTAP10-10P60014 251 aa4.59□□□□□ -1.67
CLN8-202ENST00000517514 KRTAP9-2Q9BYQ4 174 aa4.59□□□□□ -1.67
CLN8-202ENST00000517514 USH2AO75445 5202 aa4.54□□□□□ -1.68
CLN8-202ENST00000517514 H0YAA0 97 aa4.52□□□□□ -1.69
CLN8-202ENST00000517514 COA5Q86WW8 74 aa4.52□□□□□ -1.69
CLN8-202ENST00000517514 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.51□□□□□ -1.69
CLN8-202ENST00000517514 KRTAP19-1Q8IUB9 90 aa4.51□□□□□ -1.69
CLN8-202ENST00000517514 KRTAP4-12Q9BQ66 201 aa4.49□□□□□ -1.69
CLN8-202ENST00000517514 KRTAP9-6A0A140TA67 174 aa4.48□□□□□ -1.69
CLN8-202ENST00000517514 CHKB-CPT1BH3BT56 60 aa4.48□□□□□ -1.69
CLN8-202ENST00000517514 ADM2Q7Z4H4 148 aa4.48□□□□□ -1.69
CLN8-202ENST00000517514 P0C880 135 aa4.47□□□□□ -1.69
CLN8-202ENST00000517514 SPRR2GQ9BYE4 73 aa4.45□□□□□ -1.7
CLN8-202ENST00000517514 SSPOA2VEC9 5147 aa4.44□□□□□ -1.7
CLN8-202ENST00000517514 TMEM258P61165 79 aa4.44□□□□□ -1.7
CLN8-202ENST00000517514 ATP5EP56381 51 aaPredicted RBP4.43□□□□□ -1.7
CLN8-202ENST00000517514 SPTSSBQ8NFR3 76 aa4.43□□□□□ -1.7
CLN8-202ENST00000517514 FSIP2Q5CZC0 6907 aa4.43□□□□□ -1.7
CLN8-202ENST00000517514 PCP4P48539 62 aa4.41□□□□□ -1.7
CLN8-202ENST00000517514 KRTAP19-8Q3LI54 63 aa4.4□□□□□ -1.71
CLN8-202ENST00000517514 CRIPTQ9P021 101 aa4.4□□□□□ -1.71
CLN8-202ENST00000517514 H3BS24 57 aa4.39□□□□□ -1.71
CLN8-202ENST00000517514 MT1BP07438 61 aa4.39□□□□□ -1.71
CLN8-202ENST00000517514 LCE3BQ5TA77 95 aa4.37□□□□□ -1.71
CLN8-202ENST00000517514 CRCT1Q9UGL9 99 aa4.36□□□□□ -1.71
CLN8-202ENST00000517514 KRTAP13-4Q3LI77 160 aa4.32□□□□□ -1.72
CLN8-202ENST00000517514 M0QZ58 72 aa4.31□□□□□ -1.72
CLN8-202ENST00000517514 SERP1Q9Y6X1 66 aa4.31□□□□□ -1.72
CLN8-202ENST00000517514 KRTAP19-6Q3LI70 58 aa4.3□□□□□ -1.72
CLN8-202ENST00000517514 KRTAP9-9Q9BYP9 154 aa4.3□□□□□ -1.72
CLN8-202ENST00000517514 KRTAP9-4Q9BYQ2 154 aa4.3□□□□□ -1.72
CLN8-202ENST00000517514 R4GN34 69 aa4.3□□□□□ -1.72
CLN8-202ENST00000517514 FCGBPQ9Y6R7 5405 aaPredicted RBP4.3□□□□□ -1.72
CLN8-202ENST00000517514 Q5VV11 94 aa4.29□□□□□ -1.72
CLN8-202ENST00000517514 LINC01558Q9Y6Z2 57 aa4.26□□□□□ -1.73
CLN8-202ENST00000517514 A0A1B0GU69 56 aa4.23□□□□□ -1.73
CLN8-202ENST00000517514 SEC61GP60059 68 aa4.23□□□□□ -1.73
CLN8-202ENST00000517514 LINC01554Q52M75 96 aa4.22□□□□□ -1.73
CLN8-202ENST00000517514 A0A1B0GU33 70 aa4.21□□□□□ -1.74
CLN8-202ENST00000517514 KRTAP4-8A0A0G2JLE6 195 aa4.2□□□□□ -1.74
CLN8-202ENST00000517514 SPATA8Q6RVD6 105 aa4.2□□□□□ -1.74
CLN8-202ENST00000517514 KRTAP10-5P60370 271 aa4.19□□□□□ -1.74
CLN8-202ENST00000517514 KRTAP19-4Q3LI73 84 aa4.19□□□□□ -1.74
CLN8-202ENST00000517514 RPS28P62857 69 aaKnown RBP4.18□□□□□ -1.74
CLN8-202ENST00000517514 MT1XP80297 61 aa4.17□□□□□ -1.74
CLN8-202ENST00000517514 A6NN06 94 aa4.16□□□□□ -1.74
CLN8-202ENST00000517514 Q1T7F1 81 aa4.16□□□□□ -1.74
CLN8-202ENST00000517514 PLAC4Q8WY50 150 aa4.15□□□□□ -1.75
CLN8-202ENST00000517514 SMIM26A0A096LP01 95 aa4.14□□□□□ -1.75
CLN8-202ENST00000517514 PRR15LQ9BU68 103 aa4.14□□□□□ -1.75
CLN8-202ENST00000517514 LCE4AQ5TA78 99 aa4.13□□□□□ -1.75
CLN8-202ENST00000517514 A0A0D9SG42 100 aa4.12□□□□□ -1.75
CLN8-202ENST00000517514 A8MU10 97 aa4.12□□□□□ -1.75
CLN8-202ENST00000517514 LCE1DQ5T752 114 aa4.11□□□□□ -1.75
CLN8-202ENST00000517514 KRTAP12-1P59990 96 aa4.1□□□□□ -1.75
CLN8-202ENST00000517514 V9GYY9 64 aa4.1□□□□□ -1.75
CLN8-202ENST00000517514 PSPHP1O15172 72 aa4.09□□□□□ -1.75
CLN8-202ENST00000517514 KRTAP12-2P59991 146 aa4.08□□□□□ -1.76
CLN8-202ENST00000517514 KRTAP4-7Q9BYR0 210 aa4.07□□□□□ -1.76
CLN8-202ENST00000517514 KRTAP9-7A8MTY7 169 aa4.06□□□□□ -1.76
CLN8-202ENST00000517514 UQCR11O14957 56 aa4.05□□□□□ -1.76
CLN8-202ENST00000517514 MACF1Q9UPN3 7388 aaKnown RBP4.04□□□□□ -1.76
CLN8-202ENST00000517514 SPINT4Q6UDR6 99 aa4.02□□□□□ -1.77
CLN8-202ENST00000517514 PRO2289Q9P1D8 64 aa4.02□□□□□ -1.77
CLN8-202ENST00000517514 MIR22HGQ0VDD5 57 aa4□□□□□ -1.77
CLN8-202ENST00000517514 KRTAP4-9Q9BYQ8 210 aa3.99□□□□□ -1.77
CLN8-202ENST00000517514 KRTAP10-7P60409 375 aaPredicted RBP3.98□□□□□ -1.77
CLN8-202ENST00000517514 CAMK2N1Q7Z7J9 78 aa3.98□□□□□ -1.77
CLN8-202ENST00000517514 KMT2DO14686 5537 aa3.98□□□□□ -1.77
CLN8-202ENST00000517514 KRTAP10-12P60413 245 aa3.95□□□□□ -1.78
CLN8-202ENST00000517514 SYNE2Q8WXH0 6885 aaKnown RBP3.94□□□□□ -1.78
CLN8-202ENST00000517514 A6NED7 52 aa3.93□□□□□ -1.78
CLN8-202ENST00000517514 C10orf95Q9H7T3 257 aa3.91□□□□□ -1.78
CLN8-202ENST00000517514 LCE5AQ5TCM9 118 aa3.89□□□□□ -1.79
CLN8-202ENST00000517514 KRTAP6-3Q3LI67 103 aa3.88□□□□□ -1.79
CLN8-202ENST00000517514 KRTAP4-2Q9BYR5 136 aa3.88□□□□□ -1.79
CLN8-202ENST00000517514 SVIPQ8NHG7 77 aa3.87□□□□□ -1.79
CLN8-202ENST00000517514 KRTAP4-11Q9BYQ6 195 aa3.86□□□□□ -1.79
CLN8-202ENST00000517514 CDC42SE1Q9NRR8 79 aa3.85□□□□□ -1.79
CLN8-202ENST00000517514 KRTAP5-9P26371 169 aa3.84□□□□□ -1.79
CLN8-202ENST00000517514 KRTAP8-1Q8IUC2 63 aa3.81□□□□□ -1.8
CLN8-202ENST00000517514 MUC12Q9UKN1 5478 aa3.81□□□□□ -1.8
CLN8-202ENST00000517514 K7ERS5 55 aa3.78□□□□□ -1.8
CLN8-202ENST00000517514 MDN1Q9NU22 5596 aa3.76□□□□□ -1.81
CLN8-202ENST00000517514 TNP1P09430 55 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms