RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 LCA10Q71F78 164 aa3.79□□□□□ -1.8
SCARNA20.1-201ENST00000516009 LINC01558Q9Y6Z2 57 aa3.77□□□□□ -1.81
SCARNA20.1-201ENST00000516009 KRTAP19-2Q3LHN2 52 aa3.76□□□□□ -1.81
SCARNA20.1-201ENST00000516009 PRR15LQ9BU68 103 aa3.76□□□□□ -1.81
SCARNA20.1-201ENST00000516009 KRTAP3-3Q9BYR6 98 aa3.76□□□□□ -1.81
SCARNA20.1-201ENST00000516009 UBR4Q5T4S7 5183 aa3.76□□□□□ -1.81
SCARNA20.1-201ENST00000516009 RNF213Q63HN8 5207 aa3.76□□□□□ -1.81
SCARNA20.1-201ENST00000516009 MUC2Q02817 5179 aa3.75□□□□□ -1.81
SCARNA20.1-201ENST00000516009 PSPHP1O15172 72 aa3.75□□□□□ -1.81
SCARNA20.1-201ENST00000516009 A0A1B0GU69 56 aa3.74□□□□□ -1.81
SCARNA20.1-201ENST00000516009 SEC61GP60059 68 aa3.73□□□□□ -1.81
SCARNA20.1-201ENST00000516009 CSAG1Q6PB30 78 aa3.73□□□□□ -1.81
SCARNA20.1-201ENST00000516009 FLGP20930 4061 aaPredicted RBP3.7□□□□□ -1.82
SCARNA20.1-201ENST00000516009 Q5VV11 94 aa3.7□□□□□ -1.82
SCARNA20.1-201ENST00000516009 LCE2CQ5TA81 110 aa3.69□□□□□ -1.82
SCARNA20.1-201ENST00000516009 FAT4Q6V0I7 4981 aa3.65□□□□□ -1.82
SCARNA20.1-201ENST00000516009 A6NED7 52 aa3.64□□□□□ -1.83
SCARNA20.1-201ENST00000516009 H0YAA0 97 aa3.64□□□□□ -1.83
SCARNA20.1-201ENST00000516009 ADM2Q7Z4H4 148 aa3.64□□□□□ -1.83
SCARNA20.1-201ENST00000516009 KRTAP3-2Q9BYR7 98 aa3.63□□□□□ -1.83
SCARNA20.1-201ENST00000516009 A0A1B0GU33 70 aa3.62□□□□□ -1.83
SCARNA20.1-201ENST00000516009 M0R2T5 61 aa3.62□□□□□ -1.83
SCARNA20.1-201ENST00000516009 UQCR11O14957 56 aa3.62□□□□□ -1.83
SCARNA20.1-201ENST00000516009 KRTAP10-6P60371 365 aaPredicted RBP3.62□□□□□ -1.83
SCARNA20.1-201ENST00000516009 MT1HP80294 61 aa3.62□□□□□ -1.83
SCARNA20.1-201ENST00000516009 P0C880 135 aa3.61□□□□□ -1.83
SCARNA20.1-201ENST00000516009 BRK1Q8WUW1 75 aa3.6□□□□□ -1.83
SCARNA20.1-201ENST00000516009 MIR22HGQ0VDD5 57 aa3.57□□□□□ -1.84
SCARNA20.1-201ENST00000516009 CDC42SE1Q9NRR8 79 aa3.57□□□□□ -1.84
SCARNA20.1-201ENST00000516009 SPATA8Q6RVD6 105 aa3.56□□□□□ -1.84
SCARNA20.1-201ENST00000516009 M0QZ58 72 aa3.54□□□□□ -1.84
SCARNA20.1-201ENST00000516009 A8MU10 97 aa3.52□□□□□ -1.85
SCARNA20.1-201ENST00000516009 KRTAP13-4Q3LI77 160 aa3.52□□□□□ -1.85
SCARNA20.1-201ENST00000516009 R4GN34 69 aa3.52□□□□□ -1.85
SCARNA20.1-201ENST00000516009 LORP23490 312 aaPredicted RBP3.5□□□□□ -1.85
SCARNA20.1-201ENST00000516009 CRIPTQ9P021 101 aa3.5□□□□□ -1.85
SCARNA20.1-201ENST00000516009 PRO0628Q9UI54 55 aa3.5□□□□□ -1.85
SCARNA20.1-201ENST00000516009 A0A0D9SG42 100 aa3.48□□□□□ -1.85
SCARNA20.1-201ENST00000516009 MT2AP02795 61 aa3.48□□□□□ -1.85
SCARNA20.1-201ENST00000516009 LCE2AQ5TA79 106 aaPredicted RBP3.48□□□□□ -1.85
SCARNA20.1-201ENST00000516009 KRTAP9-8Q9BYQ0 159 aa3.48□□□□□ -1.85
SCARNA20.1-201ENST00000516009 KRTAP10-10P60014 251 aa3.46□□□□□ -1.86
SCARNA20.1-201ENST00000516009 MT1FP04733 61 aa3.45□□□□□ -1.86
SCARNA20.1-201ENST00000516009 LINC01554Q52M75 96 aa3.45□□□□□ -1.86
SCARNA20.1-201ENST00000516009 K7ERS5 55 aa3.44□□□□□ -1.86
SCARNA20.1-201ENST00000516009 SPRR2GQ9BYE4 73 aa3.41□□□□□ -1.86
SCARNA20.1-201ENST00000516009 KRTAP12-1P59990 96 aa3.4□□□□□ -1.87
SCARNA20.1-201ENST00000516009 PMAIP1Q13794 54 aa3.4□□□□□ -1.87
SCARNA20.1-201ENST00000516009 SPINT4Q6UDR6 99 aa3.4□□□□□ -1.87
SCARNA20.1-201ENST00000516009 A6NN06 94 aa3.39□□□□□ -1.87
SCARNA20.1-201ENST00000516009 KRTAP12-2P59991 146 aa3.39□□□□□ -1.87
SCARNA20.1-201ENST00000516009 KRTAP19-1Q8IUB9 90 aa3.38□□□□□ -1.87
SCARNA20.1-201ENST00000516009 KRTAP9-3Q9BYQ3 159 aa3.35□□□□□ -1.87
SCARNA20.1-201ENST00000516009 KRTAP19-8Q3LI54 63 aa3.32□□□□□ -1.88
SCARNA20.1-201ENST00000516009 PLAC4Q8WY50 150 aa3.32□□□□□ -1.88
SCARNA20.1-201ENST00000516009 CAMK2N1Q7Z7J9 78 aa3.31□□□□□ -1.88
SCARNA20.1-201ENST00000516009 ROMO1P60602 79 aa3.28□□□□□ -1.88
SCARNA20.1-201ENST00000516009 MT1BP07438 61 aa3.27□□□□□ -1.89
SCARNA20.1-201ENST00000516009 LCE2BO14633 110 aa3.26□□□□□ -1.89
SCARNA20.1-201ENST00000516009 KTN1-AS1Q86SY8 53 aa3.25□□□□□ -1.89
SCARNA20.1-201ENST00000516009 C10orf95Q9H7T3 257 aa3.21□□□□□ -1.9
SCARNA20.1-201ENST00000516009 USH2AO75445 5202 aa3.18□□□□□ -1.9
SCARNA20.1-201ENST00000516009 LCE2DQ5TA82 110 aaPredicted RBP3.17□□□□□ -1.9
SCARNA20.1-201ENST00000516009 PRAC1Q96KF2 57 aa3.17□□□□□ -1.9
SCARNA20.1-201ENST00000516009 MT1XP80297 61 aa3.16□□□□□ -1.9
SCARNA20.1-201ENST00000516009 SVIPQ8NHG7 77 aa3.16□□□□□ -1.9
SCARNA20.1-201ENST00000516009 PRO2289Q9P1D8 64 aa3.16□□□□□ -1.9
SCARNA20.1-201ENST00000516009 TNP1P09430 55 aa3.15□□□□□ -1.91
SCARNA20.1-201ENST00000516009 KRTAP10-5P60370 271 aa3.15□□□□□ -1.91
SCARNA20.1-201ENST00000516009 KRTAP25-1Q3LHN0 102 aa3.15□□□□□ -1.91
SCARNA20.1-201ENST00000516009 SSPOA2VEC9 5147 aa3.1□□□□□ -1.91
SCARNA20.1-201ENST00000516009 KRTAP19-6Q3LI70 58 aa3.07□□□□□ -1.92
SCARNA20.1-201ENST00000516009 PP632Q6XCG6 107 aa3.05□□□□□ -1.92
SCARNA20.1-201ENST00000516009 KRTAP9-2Q9BYQ4 174 aa3.05□□□□□ -1.92
SCARNA20.1-201ENST00000516009 KRTAP23-1A1A580 65 aa3.03□□□□□ -1.92
SCARNA20.1-201ENST00000516009 KRTAP10-7P60409 375 aaPredicted RBP3.03□□□□□ -1.92
SCARNA20.1-201ENST00000516009 FSIP2Q5CZC0 6907 aa3.03□□□□□ -1.92
SCARNA20.1-201ENST00000516009 KRTAP10-12P60413 245 aa3.02□□□□□ -1.93
SCARNA20.1-201ENST00000516009 LCE3AQ5TA76 89 aa2.99□□□□□ -1.93
SCARNA20.1-201ENST00000516009 CRCT1Q9UGL9 99 aa2.95□□□□□ -1.94
SCARNA20.1-201ENST00000516009 FCGBPQ9Y6R7 5405 aaPredicted RBP2.94□□□□□ -1.94
SCARNA20.1-201ENST00000516009 KRTAP8-1Q8IUC2 63 aa2.93□□□□□ -1.94
SCARNA20.1-201ENST00000516009 KRTAP4-8A0A0G2JLE6 195 aa2.91□□□□□ -1.94
SCARNA20.1-201ENST00000516009 KRTAP4-8Q9BYQ9 185 aa2.91□□□□□ -1.94
SCARNA20.1-201ENST00000516009 KMT2DO14686 5537 aa2.89□□□□□ -1.95
SCARNA20.1-201ENST00000516009 KRTAP12-3P60328 96 aa2.88□□□□□ -1.95
SCARNA20.1-201ENST00000516009 KRTAP19-5Q3LI72 72 aa2.86□□□□□ -1.95
SCARNA20.1-201ENST00000516009 KRTAP15-1Q3LI76 137 aa2.82□□□□□ -1.96
SCARNA20.1-201ENST00000516009 KRTAP19-7Q3SYF9 63 aa2.82□□□□□ -1.96
SCARNA20.1-201ENST00000516009 KRTAP9-6A0A140TA67 174 aa2.81□□□□□ -1.96
SCARNA20.1-201ENST00000516009 MACF1Q9UPN3 7388 aaKnown RBP2.8□□□□□ -1.96
SCARNA20.1-201ENST00000516009 MT1EP04732 61 aa2.77□□□□□ -1.97
SCARNA20.1-201ENST00000516009 SPRR2FQ96RM1 72 aa2.74□□□□□ -1.97
SCARNA20.1-201ENST00000516009 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.72□□□□□ -1.97
SCARNA20.1-201ENST00000516009 KRTAP19-4Q3LI73 84 aa2.71□□□□□ -1.98
SCARNA20.1-201ENST00000516009 MT1LQ93083 61 aa2.71□□□□□ -1.98
SCARNA20.1-201ENST00000516009 KRTAP5-9P26371 169 aa2.7□□□□□ -1.98
SCARNA20.1-201ENST00000516009 MUC12Q9UKN1 5478 aa2.69□□□□□ -1.98
SCARNA20.1-201ENST00000516009 SYNE2Q8WXH0 6885 aaKnown RBP2.69□□□□□ -1.98
SCARNA20.1-201ENST00000516009 LCE3CQ5T5A8 94 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms