RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 MP68P56378 58 aa6.62□□□□□ -1.35
USP46-209ENST00000514536 IMUPQ9GZP8 106 aa6.61□□□□□ -1.35
USP46-209ENST00000514536 S4R3F8 94 aa6.61□□□□□ -1.35
USP46-209ENST00000514536 C5orf47Q569G3 176 aa6.61□□□□□ -1.35
USP46-209ENST00000514536 KRTAP9-3Q9BYQ3 159 aa6.6□□□□□ -1.35
USP46-209ENST00000514536 LCA10Q71F78 164 aa6.58□□□□□ -1.36
USP46-209ENST00000514536 KLKP1Q107X0 134 aa6.57□□□□□ -1.36
USP46-209ENST00000514536 USH2AO75445 5202 aa6.57□□□□□ -1.36
USP46-209ENST00000514536 CSAG1Q6PB30 78 aa6.56□□□□□ -1.36
USP46-209ENST00000514536 SSPOA2VEC9 5147 aa6.55□□□□□ -1.36
USP46-209ENST00000514536 H3BPC8 53 aa6.53□□□□□ -1.36
USP46-209ENST00000514536 FAM236AA0A1B0GUQ0 79 aa6.51□□□□□ -1.37
USP46-209ENST00000514536 FAM236BA0A1B0GV22 79 aa6.51□□□□□ -1.37
USP46-209ENST00000514536 KRTAP9-7A8MTY7 169 aa6.5□□□□□ -1.37
USP46-209ENST00000514536 KRTAP4-7Q9BYR0 210 aa6.48□□□□□ -1.37
USP46-209ENST00000514536 TRAV7A0A075B6U4 112 aa6.47□□□□□ -1.37
USP46-209ENST00000514536 A8MUN3 132 aa6.47□□□□□ -1.37
USP46-209ENST00000514536 SMIM20Q8N5G0 67 aa6.47□□□□□ -1.37
USP46-209ENST00000514536 FCGBPQ9Y6R7 5405 aaPredicted RBP6.44□□□□□ -1.38
USP46-209ENST00000514536 KRTAP19-1Q8IUB9 90 aa6.44□□□□□ -1.38
USP46-209ENST00000514536 NDUFC1O43677 76 aa6.43□□□□□ -1.38
USP46-209ENST00000514536 LCE1DQ5T752 114 aa6.39□□□□□ -1.39
USP46-209ENST00000514536 DMAC1Q96GE9 116 aa6.36□□□□□ -1.39
USP46-209ENST00000514536 SNURFQ9Y675 71 aa6.33□□□□□ -1.4
USP46-209ENST00000514536 SERP2Q8N6R1 65 aa6.32□□□□□ -1.4
USP46-209ENST00000514536 H0YAA0 97 aa6.29□□□□□ -1.4
USP46-209ENST00000514536 C20orf197Q8N268 126 aa6.28□□□□□ -1.4
USP46-209ENST00000514536 ACYP2P14621 99 aa6.27□□□□□ -1.41
USP46-209ENST00000514536 SPRR2GQ9BYE4 73 aa6.27□□□□□ -1.41
USP46-209ENST00000514536 ADM2Q7Z4H4 148 aa6.27□□□□□ -1.41
USP46-209ENST00000514536 KRTAP19-6Q3LI70 58 aa6.25□□□□□ -1.41
USP46-209ENST00000514536 KRTAP4-9Q9BYQ8 210 aa6.25□□□□□ -1.41
USP46-209ENST00000514536 CRIPTQ9P021 101 aa6.24□□□□□ -1.41
USP46-209ENST00000514536 MACF1Q9UPN3 7388 aaKnown RBP6.23□□□□□ -1.41
USP46-209ENST00000514536 KRTAP19-8Q3LI54 63 aa6.21□□□□□ -1.42
USP46-209ENST00000514536 KRTAP4-2Q9BYR5 136 aa6.21□□□□□ -1.42
USP46-209ENST00000514536 MT1BP07438 61 aa6.19□□□□□ -1.42
USP46-209ENST00000514536 Q5VV11 94 aa6.19□□□□□ -1.42
USP46-209ENST00000514536 COX7CP15954 63 aa6.18□□□□□ -1.42
USP46-209ENST00000514536 SPANXA2-OT1Q8N9U9 137 aa6.18□□□□□ -1.42
USP46-209ENST00000514536 CHKB-CPT1BH3BT56 60 aa6.16□□□□□ -1.42
USP46-209ENST00000514536 P0C880 135 aa6.15□□□□□ -1.42
USP46-209ENST00000514536 SYNE2Q8WXH0 6885 aaKnown RBP6.15□□□□□ -1.42
USP46-209ENST00000514536 SPTSSBQ8NFR3 76 aa6.14□□□□□ -1.43
USP46-209ENST00000514536 R4GN34 69 aa6.08□□□□□ -1.44
USP46-209ENST00000514536 ANAPC13Q9BS18 74 aa6.07□□□□□ -1.44
USP46-209ENST00000514536 CYSTM1Q9H1C7 97 aa6.06□□□□□ -1.44
USP46-209ENST00000514536 KRTAP6-3Q3LI67 103 aa6.06□□□□□ -1.44
USP46-209ENST00000514536 A6NN06 94 aa6.05□□□□□ -1.44
USP46-209ENST00000514536 M0QZ58 72 aa6.05□□□□□ -1.44
USP46-209ENST00000514536 H7BZZ5 65 aa6.04□□□□□ -1.44
USP46-209ENST00000514536 COA5Q86WW8 74 aa6.02□□□□□ -1.45
USP46-209ENST00000514536 KRTAP10-5P60370 271 aa6□□□□□ -1.45
USP46-209ENST00000514536 LINC01554Q52M75 96 aa5.97□□□□□ -1.45
USP46-209ENST00000514536 CCDC179H3BU77 68 aa5.96□□□□□ -1.46
USP46-209ENST00000514536 PLAC4Q8WY50 150 aa5.96□□□□□ -1.46
USP46-209ENST00000514536 KRTAP4-11Q9BYQ6 195 aa5.95□□□□□ -1.46
USP46-209ENST00000514536 MT1XP80297 61 aa5.85□□□□□ -1.47
USP46-209ENST00000514536 SEC61GP60059 68 aa5.84□□□□□ -1.47
USP46-209ENST00000514536 KRTAP5-3Q6L8H2 238 aa5.84□□□□□ -1.47
USP46-209ENST00000514536 PRO2289Q9P1D8 64 aa5.84□□□□□ -1.47
USP46-209ENST00000514536 SERP1Q9Y6X1 66 aa5.84□□□□□ -1.48
USP46-209ENST00000514536 KRTAP13-4Q3LI77 160 aa5.82□□□□□ -1.48
USP46-209ENST00000514536 NEBP20929 6669 aa5.82□□□□□ -1.48
USP46-209ENST00000514536 MUC12Q9UKN1 5478 aa5.8□□□□□ -1.48
USP46-209ENST00000514536 ATP5EP56381 51 aaPredicted RBP5.78□□□□□ -1.48
USP46-209ENST00000514536 A0A1B0GU33 70 aa5.73□□□□□ -1.49
USP46-209ENST00000514536 A0A1B0GU69 56 aa5.72□□□□□ -1.49
USP46-209ENST00000514536 KRTAP5-9P26371 169 aa5.71□□□□□ -1.5
USP46-209ENST00000514536 TMEM258P61165 79 aa5.71□□□□□ -1.5
USP46-209ENST00000514536 SPATA8Q6RVD6 105 aa5.71□□□□□ -1.5
USP46-209ENST00000514536 A0A0D9SG42 100 aa5.68□□□□□ -1.5
USP46-209ENST00000514536 KRTAP20-1Q3LI63 56 aa5.67□□□□□ -1.5
USP46-209ENST00000514536 LCE4AQ5TA78 99 aa5.67□□□□□ -1.5
USP46-209ENST00000514536 KMT2DO14686 5537 aa5.65□□□□□ -1.5
USP46-209ENST00000514536 KRTAP12-2P59991 146 aa5.65□□□□□ -1.5
USP46-209ENST00000514536 CAMK2N1Q7Z7J9 78 aa5.63□□□□□ -1.51
USP46-209ENST00000514536 MDN1Q9NU22 5596 aa5.61□□□□□ -1.51
USP46-209ENST00000514536 KRTAP10-7P60409 375 aaPredicted RBP5.6□□□□□ -1.51
USP46-209ENST00000514536 SPINT4Q6UDR6 99 aa5.59□□□□□ -1.51
USP46-209ENST00000514536 PRR15LQ9BU68 103 aa5.59□□□□□ -1.51
USP46-209ENST00000514536 LINC01558Q9Y6Z2 57 aa5.59□□□□□ -1.51
USP46-209ENST00000514536 LCE5AQ5TCM9 118 aa5.57□□□□□ -1.52
USP46-209ENST00000514536 SMIM26A0A096LP01 95 aa5.55□□□□□ -1.52
USP46-209ENST00000514536 KRTAP12-1P59990 96 aa5.55□□□□□ -1.52
USP46-209ENST00000514536 KRTAP10-12P60413 245 aa5.55□□□□□ -1.52
USP46-209ENST00000514536 KRTAP8-1Q8IUC2 63 aa5.55□□□□□ -1.52
USP46-209ENST00000514536 A8MU10 97 aa5.54□□□□□ -1.52
USP46-209ENST00000514536 SPRR2FQ96RM1 72 aa5.51□□□□□ -1.53
USP46-209ENST00000514536 KRTAP2-3P0C7H8 128 aa5.49□□□□□ -1.53
USP46-209ENST00000514536 KRTAP2-4Q9BYR9 128 aa5.49□□□□□ -1.53
USP46-209ENST00000514536 SPRR2EP22531 72 aa5.43□□□□□ -1.54
USP46-209ENST00000514536 SPRR2BP35325 72 aa5.43□□□□□ -1.54
USP46-209ENST00000514536 SPRR2AP35326 72 aa5.43□□□□□ -1.54
USP46-209ENST00000514536 UQCR11O14957 56 aa5.42□□□□□ -1.54
USP46-209ENST00000514536 PCP4P48539 62 aa5.4□□□□□ -1.55
USP46-209ENST00000514536 LCE1AQ5T7P2 110 aa5.37□□□□□ -1.55
USP46-209ENST00000514536 V9GYY9 64 aa5.37□□□□□ -1.55
USP46-209ENST00000514536 Q1T7F1 81 aa5.35□□□□□ -1.55
USP46-209ENST00000514536 PSPHP1O15172 72 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms