RNA–Protein interactions for RNA: ENST00000514042.1

CTD-2201I18.1-202, humanhuman

TSL 1 (best) BASIC

Gene CTD-2201I18.1, Length 2,705 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTD-2201I18.1-202ENST00000514042 KIAA1109Q2LD37 5005 aa4.32□□□□□ -1.72
CTD-2201I18.1-202ENST00000514042 CDC42SE1Q9NRR8 79 aa4.31□□□□□ -1.72
CTD-2201I18.1-202ENST00000514042 MYCBP2O75592 4640 aa4.28□□□□□ -1.72
CTD-2201I18.1-202ENST00000514042 KRTAP9-8Q9BYQ0 159 aa4.28□□□□□ -1.72
CTD-2201I18.1-202ENST00000514042 EPPK1P58107 5090 aaKnown RBP4.28□□□□□ -1.73
CTD-2201I18.1-202ENST00000514042 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.27□□□□□ -1.73
CTD-2201I18.1-202ENST00000514042 DMBT1Q9UGM3 2413 aaPredicted RBP4.27□□□□□ -1.73
CTD-2201I18.1-202ENST00000514042 KRTAP3-1Q9BYR8 98 aa4.25□□□□□ -1.73
CTD-2201I18.1-202ENST00000514042 KRTAP9-6A0A140TA67 174 aa4.25□□□□□ -1.73
CTD-2201I18.1-202ENST00000514042 KRTAP9-2Q9BYQ4 174 aa4.25□□□□□ -1.73
CTD-2201I18.1-202ENST00000514042 KRTAP5-3Q6L8H2 238 aa4.23□□□□□ -1.73
CTD-2201I18.1-202ENST00000514042 KRTAP4-8A0A0G2JLE6 195 aa4.23□□□□□ -1.73
CTD-2201I18.1-202ENST00000514042 UQCR11O14957 56 aa4.22□□□□□ -1.73
CTD-2201I18.1-202ENST00000514042 RPL37P61927 97 aaKnown RBP4.22□□□□□ -1.73
CTD-2201I18.1-202ENST00000514042 MT1HL1P0DM35 61 aa4.21□□□□□ -1.74
CTD-2201I18.1-202ENST00000514042 COX6B2Q6YFQ2 88 aa4.21□□□□□ -1.74
CTD-2201I18.1-202ENST00000514042 PRAC1Q96KF2 57 aa4.2□□□□□ -1.74
CTD-2201I18.1-202ENST00000514042 MIR22HGQ0VDD5 57 aa4.2□□□□□ -1.74
CTD-2201I18.1-202ENST00000514042 SPATA8Q6RVD6 105 aa4.19□□□□□ -1.74
CTD-2201I18.1-202ENST00000514042 ADM2Q7Z4H4 148 aa4.18□□□□□ -1.74
CTD-2201I18.1-202ENST00000514042 ROMO1P60602 79 aa4.16□□□□□ -1.74
CTD-2201I18.1-202ENST00000514042 KRTAP4-7Q9BYR0 210 aa4.16□□□□□ -1.74
CTD-2201I18.1-202ENST00000514042 ABCA13Q86UQ4 5058 aa4.14□□□□□ -1.75
CTD-2201I18.1-202ENST00000514042 LPAP08519 4548 aa4.13□□□□□ -1.75
CTD-2201I18.1-202ENST00000514042 LCE3BQ5TA77 95 aa4.12□□□□□ -1.75
CTD-2201I18.1-202ENST00000514042 KRTAP3-3Q9BYR6 98 aa4.12□□□□□ -1.75
CTD-2201I18.1-202ENST00000514042 KRTAP3-2Q9BYR7 98 aa4.12□□□□□ -1.75
CTD-2201I18.1-202ENST00000514042 LRP2P98164 4655 aa4.12□□□□□ -1.75
CTD-2201I18.1-202ENST00000514042 KRTAP4-5Q9BYR2 181 aa4.12□□□□□ -1.75
CTD-2201I18.1-202ENST00000514042 A0A1B0GU33 70 aa4.11□□□□□ -1.75
CTD-2201I18.1-202ENST00000514042 TPRXLQ17RH7 258 aa4.09□□□□□ -1.75
CTD-2201I18.1-202ENST00000514042 H0YAA0 97 aa4.08□□□□□ -1.76
CTD-2201I18.1-202ENST00000514042 H1FX-AS1Q4G0G2 97 aa4.08□□□□□ -1.76
CTD-2201I18.1-202ENST00000514042 LUZP6Q538Z0 58 aa4.08□□□□□ -1.76
CTD-2201I18.1-202ENST00000514042 S4R3F8 94 aa4.08□□□□□ -1.76
CTD-2201I18.1-202ENST00000514042 HERC2O95714 4834 aa4.03□□□□□ -1.76
CTD-2201I18.1-202ENST00000514042 K7ERS5 55 aa4.02□□□□□ -1.77
CTD-2201I18.1-202ENST00000514042 KRTAP9-9Q9BYP9 154 aa4.02□□□□□ -1.77
CTD-2201I18.1-202ENST00000514042 KRTAP9-4Q9BYQ2 154 aa4.02□□□□□ -1.77
CTD-2201I18.1-202ENST00000514042 CSAG1Q6PB30 78 aa4.01□□□□□ -1.77
CTD-2201I18.1-202ENST00000514042 P0C880 135 aa4.01□□□□□ -1.77
CTD-2201I18.1-202ENST00000514042 KRTAP10-6P60371 365 aaPredicted RBP4.01□□□□□ -1.77
CTD-2201I18.1-202ENST00000514042 BIRC6Q9NR09 4857 aa3.96□□□□□ -1.78
CTD-2201I18.1-202ENST00000514042 KRTAP13-4Q3LI77 160 aa3.96□□□□□ -1.78
CTD-2201I18.1-202ENST00000514042 A0A0D9SG42 100 aa3.95□□□□□ -1.78
CTD-2201I18.1-202ENST00000514042 KRTAP4-2Q9BYR5 136 aa3.94□□□□□ -1.78
CTD-2201I18.1-202ENST00000514042 MUC17Q685J3 4493 aa3.93□□□□□ -1.78
CTD-2201I18.1-202ENST00000514042 KRTAP23-1A1A580 65 aa3.93□□□□□ -1.78
CTD-2201I18.1-202ENST00000514042 CAMK2N1Q7Z7J9 78 aa3.92□□□□□ -1.78
CTD-2201I18.1-202ENST00000514042 KRTAP4-1Q9BYQ7 146 aa3.89□□□□□ -1.79
CTD-2201I18.1-202ENST00000514042 NDUFAF8A1L188 74 aa3.87□□□□□ -1.79
CTD-2201I18.1-202ENST00000514042 KRTAP25-1Q3LHN0 102 aa3.87□□□□□ -1.79
CTD-2201I18.1-202ENST00000514042 KRTAP4-9Q9BYQ8 210 aa3.87□□□□□ -1.79
CTD-2201I18.1-202ENST00000514042 MUC2Q02817 5179 aa3.86□□□□□ -1.79
CTD-2201I18.1-202ENST00000514042 LCE1DQ5T752 114 aa3.86□□□□□ -1.79
CTD-2201I18.1-202ENST00000514042 PCLOQ9Y6V0 5065 aa3.85□□□□□ -1.79
CTD-2201I18.1-202ENST00000514042 HERC1Q15751 4861 aa3.85□□□□□ -1.79
CTD-2201I18.1-202ENST00000514042 M0QZ58 72 aa3.83□□□□□ -1.8
CTD-2201I18.1-202ENST00000514042 KRTAP12-2P59991 146 aa3.83□□□□□ -1.8
CTD-2201I18.1-202ENST00000514042 SPINT4Q6UDR6 99 aa3.83□□□□□ -1.8
CTD-2201I18.1-202ENST00000514042 CRIPTQ9P021 101 aa3.82□□□□□ -1.8
CTD-2201I18.1-202ENST00000514042 HMCN2Q8NDA2 5059 aa3.8□□□□□ -1.8
CTD-2201I18.1-202ENST00000514042 KRTAP12-1P59990 96 aa3.8□□□□□ -1.8
CTD-2201I18.1-202ENST00000514042 R4GN34 69 aa3.79□□□□□ -1.8
CTD-2201I18.1-202ENST00000514042 KRTAP19-2Q3LHN2 52 aa3.79□□□□□ -1.8
CTD-2201I18.1-202ENST00000514042 KRTAP4-12Q9BQ66 201 aa3.79□□□□□ -1.8
CTD-2201I18.1-202ENST00000514042 LORP23490 312 aaPredicted RBP3.75□□□□□ -1.81
CTD-2201I18.1-202ENST00000514042 KRTAP15-1Q3LI76 137 aa3.73□□□□□ -1.81
CTD-2201I18.1-202ENST00000514042 FLGP20930 4061 aaPredicted RBP3.73□□□□□ -1.81
CTD-2201I18.1-202ENST00000514042 C10orf95Q9H7T3 257 aa3.7□□□□□ -1.82
CTD-2201I18.1-202ENST00000514042 FAT4Q6V0I7 4981 aa3.68□□□□□ -1.82
CTD-2201I18.1-202ENST00000514042 UBR4Q5T4S7 5183 aa3.65□□□□□ -1.82
CTD-2201I18.1-202ENST00000514042 RNF213Q63HN8 5207 aa3.65□□□□□ -1.82
CTD-2201I18.1-202ENST00000514042 LCE2CQ5TA81 110 aa3.61□□□□□ -1.83
CTD-2201I18.1-202ENST00000514042 M0R2T5 61 aa3.58□□□□□ -1.84
CTD-2201I18.1-202ENST00000514042 LCE2BO14633 110 aa3.56□□□□□ -1.84
CTD-2201I18.1-202ENST00000514042 KRTAP4-11Q9BYQ6 195 aa3.55□□□□□ -1.84
CTD-2201I18.1-202ENST00000514042 MT1HP80294 61 aa3.54□□□□□ -1.84
CTD-2201I18.1-202ENST00000514042 LCE2AQ5TA79 106 aaPredicted RBP3.53□□□□□ -1.84
CTD-2201I18.1-202ENST00000514042 PRO2289Q9P1D8 64 aa3.5□□□□□ -1.85
CTD-2201I18.1-202ENST00000514042 SPRR2GQ9BYE4 73 aa3.48□□□□□ -1.85
CTD-2201I18.1-202ENST00000514042 KRTAP10-10P60014 251 aa3.47□□□□□ -1.85
CTD-2201I18.1-202ENST00000514042 KRTAP19-1Q8IUB9 90 aa3.47□□□□□ -1.85
CTD-2201I18.1-202ENST00000514042 HMCN1Q96RW7 5635 aa3.46□□□□□ -1.86
CTD-2201I18.1-202ENST00000514042 PLAC4Q8WY50 150 aa3.45□□□□□ -1.86
CTD-2201I18.1-202ENST00000514042 MT2AP02795 61 aa3.45□□□□□ -1.86
CTD-2201I18.1-202ENST00000514042 MT1FP04733 61 aa3.45□□□□□ -1.86
CTD-2201I18.1-202ENST00000514042 TNP1P09430 55 aa3.42□□□□□ -1.86
CTD-2201I18.1-202ENST00000514042 PP632Q6XCG6 107 aa3.42□□□□□ -1.86
CTD-2201I18.1-202ENST00000514042 KRTAP19-8Q3LI54 63 aa3.33□□□□□ -1.88
CTD-2201I18.1-202ENST00000514042 MT1BP07438 61 aa3.3□□□□□ -1.88
CTD-2201I18.1-202ENST00000514042 KRTAP9-3Q9BYQ3 159 aa3.29□□□□□ -1.88
CTD-2201I18.1-202ENST00000514042 KRTAP10-5P60370 271 aa3.26□□□□□ -1.89
CTD-2201I18.1-202ENST00000514042 MT1XP80297 61 aa3.26□□□□□ -1.89
CTD-2201I18.1-202ENST00000514042 LCE3AQ5TA76 89 aa3.26□□□□□ -1.89
CTD-2201I18.1-202ENST00000514042 INE1O15225 51 aa3.25□□□□□ -1.89
CTD-2201I18.1-202ENST00000514042 USH2AO75445 5202 aa3.2□□□□□ -1.9
CTD-2201I18.1-202ENST00000514042 KRTAP10-12P60413 245 aa3.17□□□□□ -1.9
CTD-2201I18.1-202ENST00000514042 KRTAP10-7P60409 375 aaPredicted RBP3.16□□□□□ -1.9
CTD-2201I18.1-202ENST00000514042 KRTAP8-1Q8IUC2 63 aa3.15□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms