RNA–Protein interactions for RNA: ENST00000512531.1

MSH3-203, Transcript of mutS homolog 3, humanhuman

TSL 5

Gene MSH3, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-203ENST00000512531 LCE5AQ5TCM9 118 aa5.44□□□□□ -1.54
MSH3-203ENST00000512531 PRAC1Q96KF2 57 aa5.43□□□□□ -1.54
MSH3-203ENST00000512531 Q8N9P0 234 aaPredicted RBP5.41□□□□□ -1.54
MSH3-203ENST00000512531 PRR4Q16378 134 aa5.4□□□□□ -1.54
MSH3-203ENST00000512531 PCOTHQ58A44 107 aa5.4□□□□□ -1.54
MSH3-203ENST00000512531 Q1T7F1 81 aa5.39□□□□□ -1.55
MSH3-203ENST00000512531 C4orf26Q17RF5 130 aa5.38□□□□□ -1.55
MSH3-203ENST00000512531 KRTAP4-11Q9BYQ6 195 aa5.38□□□□□ -1.55
MSH3-203ENST00000512531 IGKV2-30P06310 120 aa5.37□□□□□ -1.55
MSH3-203ENST00000512531 ACYP2P14621 99 aa5.37□□□□□ -1.55
MSH3-203ENST00000512531 FP248Q71RG6 208 aaPredicted RBP5.37□□□□□ -1.55
MSH3-203ENST00000512531 NOTCH2NLQ7Z3S9 236 aa5.37□□□□□ -1.55
MSH3-203ENST00000512531 COA5Q86WW8 74 aa5.35□□□□□ -1.55
MSH3-203ENST00000512531 CHKB-CPT1BH3BT56 60 aa5.33□□□□□ -1.56
MSH3-203ENST00000512531 Q5W150 140 aa5.33□□□□□ -1.56
MSH3-203ENST00000512531 KRTAP13-3Q3SY46 172 aa5.31□□□□□ -1.56
MSH3-203ENST00000512531 KRTAP16-1A8MUX0 517 aa5.3□□□□□ -1.56
MSH3-203ENST00000512531 C7orf65Q6ZTY9 151 aa5.29□□□□□ -1.56
MSH3-203ENST00000512531 PRO0628Q9UI54 55 aa5.28□□□□□ -1.56
MSH3-203ENST00000512531 LPAP08519 4548 aa5.28□□□□□ -1.56
MSH3-203ENST00000512531 A8MUN3 132 aa5.27□□□□□ -1.57
MSH3-203ENST00000512531 HRES1P13985 223 aa5.27□□□□□ -1.57
MSH3-203ENST00000512531 DMAC1Q96GE9 116 aa5.27□□□□□ -1.57
MSH3-203ENST00000512531 PRR15LQ9BU68 103 aa5.27□□□□□ -1.57
MSH3-203ENST00000512531 IGKV2D-30A0A075B6S6 120 aa5.26□□□□□ -1.57
MSH3-203ENST00000512531 BRK1Q8WUW1 75 aa5.26□□□□□ -1.57
MSH3-203ENST00000512531 SPTSSBQ8NFR3 76 aa5.25□□□□□ -1.57
MSH3-203ENST00000512531 RETNLBQ9BQ08 111 aa5.25□□□□□ -1.57
MSH3-203ENST00000512531 PSPHP1O15172 72 aa5.23□□□□□ -1.57
MSH3-203ENST00000512531 C20orf166-AS1Q96NR2 134 aa5.23□□□□□ -1.57
MSH3-203ENST00000512531 LINC01558Q9Y6Z2 57 aa5.23□□□□□ -1.57
MSH3-203ENST00000512531 MUC2Q02817 5179 aa5.23□□□□□ -1.57
MSH3-203ENST00000512531 A8MUU9 505 aa5.21□□□□□ -1.58
MSH3-203ENST00000512531 FAT4Q6V0I7 4981 aa5.19□□□□□ -1.58
MSH3-203ENST00000512531 C9orf92A6NGG3 77 aa5.18□□□□□ -1.58
MSH3-203ENST00000512531 A6NED7 52 aa5.17□□□□□ -1.58
MSH3-203ENST00000512531 SEC61GP60059 68 aa5.16□□□□□ -1.58
MSH3-203ENST00000512531 Q5VV11 94 aa5.16□□□□□ -1.58
MSH3-203ENST00000512531 ATP11AUNQ6ZP68 121 aa5.16□□□□□ -1.58
MSH3-203ENST00000512531 A0A1B0GU69 56 aa5.14□□□□□ -1.59
MSH3-203ENST00000512531 KRTAP5-3Q6L8H2 238 aa5.14□□□□□ -1.59
MSH3-203ENST00000512531 SPINK7P58062 85 aa5.09□□□□□ -1.59
MSH3-203ENST00000512531 CDC42SE1Q9NRR8 79 aa5.09□□□□□ -1.59
MSH3-203ENST00000512531 TPRXLQ17RH7 258 aa5.08□□□□□ -1.6
MSH3-203ENST00000512531 MUC17Q685J3 4493 aa5.07□□□□□ -1.6
MSH3-203ENST00000512531 RPL37P61927 97 aaKnown RBP5.06□□□□□ -1.6
MSH3-203ENST00000512531 UQCR11O14957 56 aa5.04□□□□□ -1.6
MSH3-203ENST00000512531 COX6B2Q6YFQ2 88 aa5.03□□□□□ -1.6
MSH3-203ENST00000512531 PMAIP1Q13794 54 aa5□□□□□ -1.61
MSH3-203ENST00000512531 KRTAP9-8Q9BYQ0 159 aa4.98□□□□□ -1.61
MSH3-203ENST00000512531 MIR22HGQ0VDD5 57 aa4.97□□□□□ -1.61
MSH3-203ENST00000512531 LCE1AQ5T7P2 110 aa4.97□□□□□ -1.61
MSH3-203ENST00000512531 LCA10Q71F78 164 aa4.95□□□□□ -1.62
MSH3-203ENST00000512531 SPATA8Q6RVD6 105 aa4.94□□□□□ -1.62
MSH3-203ENST00000512531 RBM12B-AS1Q9P1G2 102 aa4.93□□□□□ -1.62
MSH3-203ENST00000512531 CRCT1Q9UGL9 99 aa4.91□□□□□ -1.62
MSH3-203ENST00000512531 S4R3F8 94 aa4.9□□□□□ -1.63
MSH3-203ENST00000512531 K7ERS5 55 aa4.88□□□□□ -1.63
MSH3-203ENST00000512531 A0A1B0GU33 70 aa4.87□□□□□ -1.63
MSH3-203ENST00000512531 KTN1-AS1Q86SY8 53 aa4.87□□□□□ -1.63
MSH3-203ENST00000512531 H1FX-AS1Q4G0G2 97 aa4.86□□□□□ -1.63
MSH3-203ENST00000512531 KRTAP4-1Q9BYQ7 146 aa4.86□□□□□ -1.63
MSH3-203ENST00000512531 FSIP2Q5CZC0 6907 aa4.86□□□□□ -1.63
MSH3-203ENST00000512531 A6NN06 94 aa4.83□□□□□ -1.64
MSH3-203ENST00000512531 A8MU10 97 aa4.81□□□□□ -1.64
MSH3-203ENST00000512531 CSAG1Q6PB30 78 aa4.79□□□□□ -1.64
MSH3-203ENST00000512531 KRTAP19-2Q3LHN2 52 aa4.78□□□□□ -1.64
MSH3-203ENST00000512531 MT1HP80294 61 aa4.77□□□□□ -1.65
MSH3-203ENST00000512531 NDUFAF8A1L188 74 aa4.76□□□□□ -1.65
MSH3-203ENST00000512531 H0YAA0 97 aa4.72□□□□□ -1.65
MSH3-203ENST00000512531 KRTAP10-6P60371 365 aaPredicted RBP4.72□□□□□ -1.65
MSH3-203ENST00000512531 FLGP20930 4061 aaPredicted RBP4.67□□□□□ -1.66
MSH3-203ENST00000512531 M0QZ58 72 aa4.67□□□□□ -1.66
MSH3-203ENST00000512531 ADM2Q7Z4H4 148 aa4.66□□□□□ -1.66
MSH3-203ENST00000512531 M0R2T5 61 aa4.64□□□□□ -1.67
MSH3-203ENST00000512531 A0A0D9SG42 100 aa4.57□□□□□ -1.68
MSH3-203ENST00000512531 P0C880 135 aa4.56□□□□□ -1.68
MSH3-203ENST00000512531 ROMO1P60602 79 aa4.56□□□□□ -1.68
MSH3-203ENST00000512531 R4GN34 69 aa4.55□□□□□ -1.68
MSH3-203ENST00000512531 SSPOA2VEC9 5147 aa4.51□□□□□ -1.69
MSH3-203ENST00000512531 USH2AO75445 5202 aa4.5□□□□□ -1.69
MSH3-203ENST00000512531 SPINT4Q6UDR6 99 aa4.5□□□□□ -1.69
MSH3-203ENST00000512531 KRTAP13-4Q3LI77 160 aa4.49□□□□□ -1.69
MSH3-203ENST00000512531 KRTAP2-2Q9BYT5 123 aa4.49□□□□□ -1.69
MSH3-203ENST00000512531 CRIPTQ9P021 101 aa4.48□□□□□ -1.69
MSH3-203ENST00000512531 LINC01554Q52M75 96 aa4.47□□□□□ -1.69
MSH3-203ENST00000512531 KRTAP25-1Q3LHN0 102 aa4.46□□□□□ -1.7
MSH3-203ENST00000512531 LCE1FQ5T754 118 aa4.46□□□□□ -1.7
MSH3-203ENST00000512531 FCGBPQ9Y6R7 5405 aaPredicted RBP4.46□□□□□ -1.7
MSH3-203ENST00000512531 MT3P25713 68 aa4.44□□□□□ -1.7
MSH3-203ENST00000512531 KRTAP12-1P59990 96 aa4.42□□□□□ -1.7
MSH3-203ENST00000512531 KRTAP12-2P59991 146 aa4.4□□□□□ -1.71
MSH3-203ENST00000512531 MT2AP02795 61 aa4.39□□□□□ -1.71
MSH3-203ENST00000512531 MACF1Q9UPN3 7388 aaKnown RBP4.34□□□□□ -1.71
MSH3-203ENST00000512531 MT1FP04733 61 aa4.34□□□□□ -1.71
MSH3-203ENST00000512531 CAMK2N1Q7Z7J9 78 aa4.32□□□□□ -1.72
MSH3-203ENST00000512531 KRTAP10-10P60014 251 aa4.31□□□□□ -1.72
MSH3-203ENST00000512531 SYNE2Q8WXH0 6885 aaKnown RBP4.31□□□□□ -1.72
MSH3-203ENST00000512531 KRTAP19-6Q3LI70 58 aa4.3□□□□□ -1.72
MSH3-203ENST00000512531 KRTAP6-3Q3LI67 103 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms