RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 KRTAP3-3Q9BYR6 98 aa6.11□□□□□ -1.43
TCOF1-210ENST00000506767 SNURFQ9Y675 71 aa6.11□□□□□ -1.43
TCOF1-210ENST00000506767 C20orf197Q8N268 126 aa6.1□□□□□ -1.43
TCOF1-210ENST00000506767 COX7CP15954 63 aa6.09□□□□□ -1.43
TCOF1-210ENST00000506767 DMAC1Q96GE9 116 aa6.09□□□□□ -1.43
TCOF1-210ENST00000506767 MT1FP04733 61 aa6.08□□□□□ -1.44
TCOF1-210ENST00000506767 CSAG1Q6PB30 78 aa6.07□□□□□ -1.44
TCOF1-210ENST00000506767 KRTAP10-10P60014 251 aa6.03□□□□□ -1.44
TCOF1-210ENST00000506767 NDUFC1O43677 76 aa6.01□□□□□ -1.45
TCOF1-210ENST00000506767 SPANXA2-OT1Q8N9U9 137 aa6.01□□□□□ -1.45
TCOF1-210ENST00000506767 ANAPC13Q9BS18 74 aa6.01□□□□□ -1.45
TCOF1-210ENST00000506767 ACYP2P14621 99 aa5.99□□□□□ -1.45
TCOF1-210ENST00000506767 KRTAP9-3Q9BYQ3 159 aa5.99□□□□□ -1.45
TCOF1-210ENST00000506767 KRTAP3-2Q9BYR7 98 aa5.96□□□□□ -1.46
TCOF1-210ENST00000506767 CYSTM1Q9H1C7 97 aa5.96□□□□□ -1.46
TCOF1-210ENST00000506767 H7BZZ5 65 aa5.93□□□□□ -1.46
TCOF1-210ENST00000506767 H0YAA0 97 aa5.92□□□□□ -1.46
TCOF1-210ENST00000506767 CCDC179H3BU77 68 aa5.9□□□□□ -1.46
TCOF1-210ENST00000506767 LCE2BO14633 110 aa5.89□□□□□ -1.47
TCOF1-210ENST00000506767 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.84□□□□□ -1.47
TCOF1-210ENST00000506767 CHKB-CPT1BH3BT56 60 aa5.84□□□□□ -1.47
TCOF1-210ENST00000506767 ADM2Q7Z4H4 148 aa5.83□□□□□ -1.48
TCOF1-210ENST00000506767 KRTAP19-1Q8IUB9 90 aa5.83□□□□□ -1.48
TCOF1-210ENST00000506767 SPTSSBQ8NFR3 76 aa5.83□□□□□ -1.48
TCOF1-210ENST00000506767 KRTAP9-7A8MTY7 169 aa5.82□□□□□ -1.48
TCOF1-210ENST00000506767 USH2AO75445 5202 aa5.82□□□□□ -1.48
TCOF1-210ENST00000506767 COA5Q86WW8 74 aa5.81□□□□□ -1.48
TCOF1-210ENST00000506767 SSPOA2VEC9 5147 aa5.8□□□□□ -1.48
TCOF1-210ENST00000506767 SPRR2GQ9BYE4 73 aa5.8□□□□□ -1.48
TCOF1-210ENST00000506767 CRIPTQ9P021 101 aa5.8□□□□□ -1.48
TCOF1-210ENST00000506767 P0C880 135 aa5.75□□□□□ -1.49
TCOF1-210ENST00000506767 ATP5EP56381 51 aaPredicted RBP5.73□□□□□ -1.49
TCOF1-210ENST00000506767 H3BS24 57 aa5.72□□□□□ -1.49
TCOF1-210ENST00000506767 KRTAP19-8Q3LI54 63 aa5.72□□□□□ -1.49
TCOF1-210ENST00000506767 FCGBPQ9Y6R7 5405 aaPredicted RBP5.71□□□□□ -1.5
TCOF1-210ENST00000506767 TMEM258P61165 79 aa5.69□□□□□ -1.5
TCOF1-210ENST00000506767 MT1BP07438 61 aa5.67□□□□□ -1.5
TCOF1-210ENST00000506767 Q5VV11 94 aa5.65□□□□□ -1.5
TCOF1-210ENST00000506767 R4GN34 69 aa5.65□□□□□ -1.5
TCOF1-210ENST00000506767 KRTAP19-6Q3LI70 58 aa5.64□□□□□ -1.51
TCOF1-210ENST00000506767 M0QZ58 72 aa5.61□□□□□ -1.51
TCOF1-210ENST00000506767 PCP4P48539 62 aa5.56□□□□□ -1.52
TCOF1-210ENST00000506767 SEC61GP60059 68 aa5.56□□□□□ -1.52
TCOF1-210ENST00000506767 MACF1Q9UPN3 7388 aaKnown RBP5.56□□□□□ -1.52
TCOF1-210ENST00000506767 SYNE2Q8WXH0 6885 aaKnown RBP5.56□□□□□ -1.52
TCOF1-210ENST00000506767 SERP1Q9Y6X1 66 aa5.55□□□□□ -1.52
TCOF1-210ENST00000506767 KRTAP13-4Q3LI77 160 aa5.51□□□□□ -1.53
TCOF1-210ENST00000506767 A0A1B0GU69 56 aa5.49□□□□□ -1.53
TCOF1-210ENST00000506767 LINC01554Q52M75 96 aa5.49□□□□□ -1.53
TCOF1-210ENST00000506767 PLAC4Q8WY50 150 aa5.48□□□□□ -1.53
TCOF1-210ENST00000506767 KRTAP10-5P60370 271 aa5.47□□□□□ -1.53
TCOF1-210ENST00000506767 LINC01558Q9Y6Z2 57 aa5.47□□□□□ -1.53
TCOF1-210ENST00000506767 A0A1B0GU33 70 aa5.46□□□□□ -1.54
TCOF1-210ENST00000506767 A6NN06 94 aa5.45□□□□□ -1.54
TCOF1-210ENST00000506767 SPATA8Q6RVD6 105 aa5.41□□□□□ -1.54
TCOF1-210ENST00000506767 PRR15LQ9BU68 103 aa5.41□□□□□ -1.54
TCOF1-210ENST00000506767 MT1XP80297 61 aa5.39□□□□□ -1.55
TCOF1-210ENST00000506767 KRTAP6-3Q3LI67 103 aa5.39□□□□□ -1.55
TCOF1-210ENST00000506767 PRO2289Q9P1D8 64 aa5.35□□□□□ -1.55
TCOF1-210ENST00000506767 RPS28P62857 69 aaKnown RBP5.34□□□□□ -1.55
TCOF1-210ENST00000506767 A0A0D9SG42 100 aa5.32□□□□□ -1.56
TCOF1-210ENST00000506767 Q1T7F1 81 aa5.32□□□□□ -1.56
TCOF1-210ENST00000506767 V9GYY9 64 aa5.32□□□□□ -1.56
TCOF1-210ENST00000506767 SMIM26A0A096LP01 95 aa5.31□□□□□ -1.56
TCOF1-210ENST00000506767 KRTAP12-1P59990 96 aa5.27□□□□□ -1.57
TCOF1-210ENST00000506767 A8MU10 97 aa5.26□□□□□ -1.57
TCOF1-210ENST00000506767 UQCR11O14957 56 aa5.25□□□□□ -1.57
TCOF1-210ENST00000506767 SPINT4Q6UDR6 99 aa5.24□□□□□ -1.57
TCOF1-210ENST00000506767 PSPHP1O15172 72 aa5.23□□□□□ -1.57
TCOF1-210ENST00000506767 KRTAP12-2P59991 146 aa5.23□□□□□ -1.57
TCOF1-210ENST00000506767 CAMK2N1Q7Z7J9 78 aa5.22□□□□□ -1.57
TCOF1-210ENST00000506767 NEBP20929 6669 aa5.2□□□□□ -1.58
TCOF1-210ENST00000506767 MUC12Q9UKN1 5478 aa5.16□□□□□ -1.58
TCOF1-210ENST00000506767 MIR22HGQ0VDD5 57 aa5.16□□□□□ -1.58
TCOF1-210ENST00000506767 KRTAP10-7P60409 375 aaPredicted RBP5.14□□□□□ -1.59
TCOF1-210ENST00000506767 KRTAP10-12P60413 245 aa5.13□□□□□ -1.59
TCOF1-210ENST00000506767 A0A0A0MQY5 61 aa5.11□□□□□ -1.59
TCOF1-210ENST00000506767 KRTAP20-1Q3LI63 56 aa5.1□□□□□ -1.59
TCOF1-210ENST00000506767 A6NED7 52 aa5.06□□□□□ -1.6
TCOF1-210ENST00000506767 KMT2DO14686 5537 aa5.06□□□□□ -1.6
TCOF1-210ENST00000506767 KRTAP4-8A0A0G2JLE6 195 aa5.05□□□□□ -1.6
TCOF1-210ENST00000506767 KRTAP5-9P26371 169 aa5.05□□□□□ -1.6
TCOF1-210ENST00000506767 KRTAP4-8Q9BYQ9 185 aa5.05□□□□□ -1.6
TCOF1-210ENST00000506767 C10orf95Q9H7T3 257 aa5.02□□□□□ -1.61
TCOF1-210ENST00000506767 KRTAP8-1Q8IUC2 63 aa5.01□□□□□ -1.61
TCOF1-210ENST00000506767 K7ERS5 55 aa4.97□□□□□ -1.61
TCOF1-210ENST00000506767 MDN1Q9NU22 5596 aa4.96□□□□□ -1.62
TCOF1-210ENST00000506767 SPRR2FQ96RM1 72 aa4.96□□□□□ -1.62
TCOF1-210ENST00000506767 CDC42SE1Q9NRR8 79 aa4.93□□□□□ -1.62
TCOF1-210ENST00000506767 TNP1P09430 55 aa4.92□□□□□ -1.62
TCOF1-210ENST00000506767 SPRR2EP22531 72 aa4.92□□□□□ -1.62
TCOF1-210ENST00000506767 SPRR2BP35325 72 aa4.92□□□□□ -1.62
TCOF1-210ENST00000506767 SPRR2AP35326 72 aa4.92□□□□□ -1.62
TCOF1-210ENST00000506767 KRTAP2-3P0C7H8 128 aa4.91□□□□□ -1.62
TCOF1-210ENST00000506767 KRTAP2-4Q9BYR9 128 aa4.91□□□□□ -1.62
TCOF1-210ENST00000506767 KRTAP23-1A1A580 65 aa4.83□□□□□ -1.64
TCOF1-210ENST00000506767 KRTAP19-7Q3SYF9 63 aa4.82□□□□□ -1.64
TCOF1-210ENST00000506767 KRTAP25-1Q3LHN0 102 aa4.8□□□□□ -1.64
TCOF1-210ENST00000506767 LCE1AQ5T7P2 110 aa4.8□□□□□ -1.64
TCOF1-210ENST00000506767 LCE3AQ5TA76 89 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 361.7 ms