RNA–Protein interactions for RNA: ENST00000506734.5

SMN2-206, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 1,550 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-206ENST00000506734 Q1T7F1 81 aa9.46□□□□□ -0.9
SMN2-206ENST00000506734 MPLKIPQ8TAP9 179 aa9.44□□□□□ -0.9
SMN2-206ENST00000506734 V9GYY9 64 aa9.41□□□□□ -0.9
SMN2-206ENST00000506734 LCE2AQ5TA79 106 aaPredicted RBP9.35□□□□□ -0.91
SMN2-206ENST00000506734 RBM12B-AS1Q9P1G2 102 aa9.35□□□□□ -0.91
SMN2-206ENST00000506734 KRTAP4-1Q9BYQ7 146 aa9.33□□□□□ -0.92
SMN2-206ENST00000506734 LINC01558Q9Y6Z2 57 aa9.33□□□□□ -0.92
SMN2-206ENST00000506734 SPTSSBQ8NFR3 76 aa9.32□□□□□ -0.92
SMN2-206ENST00000506734 H1FX-AS1Q4G0G2 97 aa9.29□□□□□ -0.92
SMN2-206ENST00000506734 PSPHP1O15172 72 aa9.23□□□□□ -0.93
SMN2-206ENST00000506734 PRR15LQ9BU68 103 aa9.23□□□□□ -0.93
SMN2-206ENST00000506734 S4R3F8 94 aa9.23□□□□□ -0.93
SMN2-206ENST00000506734 LCA10Q71F78 164 aa9.21□□□□□ -0.93
SMN2-206ENST00000506734 Q5VV11 94 aa9.19□□□□□ -0.94
SMN2-206ENST00000506734 KRTAP4-8Q9BYQ9 185 aa9.15□□□□□ -0.95
SMN2-206ENST00000506734 A0A1B0GU69 56 aa9.14□□□□□ -0.95
SMN2-206ENST00000506734 KRTAP19-2Q3LHN2 52 aa9.14□□□□□ -0.95
SMN2-206ENST00000506734 MUC2Q02817 5179 aa9.08□□□□□ -0.96
SMN2-206ENST00000506734 SEC61GP60059 68 aa9.07□□□□□ -0.96
SMN2-206ENST00000506734 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.03□□□□□ -0.96
SMN2-206ENST00000506734 CSAG1Q6PB30 78 aa9.01□□□□□ -0.97
SMN2-206ENST00000506734 FLGP20930 4061 aaPredicted RBP9□□□□□ -0.97
SMN2-206ENST00000506734 UBR4Q5T4S7 5183 aa9□□□□□ -0.97
SMN2-206ENST00000506734 KRTAP9-2Q9BYQ4 174 aa8.99□□□□□ -0.97
SMN2-206ENST00000506734 RNF213Q63HN8 5207 aa8.96□□□□□ -0.97
SMN2-206ENST00000506734 KRTAP9-6A0A140TA67 174 aa8.95□□□□□ -0.98
SMN2-206ENST00000506734 A6NED7 52 aa8.95□□□□□ -0.98
SMN2-206ENST00000506734 BRK1Q8WUW1 75 aa8.91□□□□□ -0.98
SMN2-206ENST00000506734 UQCR11O14957 56 aa8.89□□□□□ -0.99
SMN2-206ENST00000506734 KRTAP10-6P60371 365 aaPredicted RBP8.89□□□□□ -0.99
SMN2-206ENST00000506734 LCE2CQ5TA81 110 aa8.88□□□□□ -0.99
SMN2-206ENST00000506734 H0YAA0 97 aa8.87□□□□□ -0.99
SMN2-206ENST00000506734 A0A1B0GU33 70 aa8.85□□□□□ -0.99
SMN2-206ENST00000506734 CDC42SE1Q9NRR8 79 aa8.85□□□□□ -0.99
SMN2-206ENST00000506734 ADM2Q7Z4H4 148 aa8.82□□□□□ -1
SMN2-206ENST00000506734 SPATA8Q6RVD6 105 aa8.8□□□□□ -1
SMN2-206ENST00000506734 P0C880 135 aa8.78□□□□□ -1
SMN2-206ENST00000506734 MIR22HGQ0VDD5 57 aa8.78□□□□□ -1
SMN2-206ENST00000506734 PRO0628Q9UI54 55 aa8.78□□□□□ -1
SMN2-206ENST00000506734 A8MU10 97 aa8.78□□□□□ -1
SMN2-206ENST00000506734 FAT4Q6V0I7 4981 aa8.72□□□□□ -1.01
SMN2-206ENST00000506734 MT1HP80294 61 aa8.69□□□□□ -1.02
SMN2-206ENST00000506734 LCE3BQ5TA77 95 aa8.65□□□□□ -1.03
SMN2-206ENST00000506734 KRTAP13-4Q3LI77 160 aa8.64□□□□□ -1.03
SMN2-206ENST00000506734 M0QZ58 72 aa8.6□□□□□ -1.03
SMN2-206ENST00000506734 KRTAP4-8A0A0G2JLE6 195 aa8.57□□□□□ -1.04
SMN2-206ENST00000506734 M0R2T5 61 aa8.56□□□□□ -1.04
SMN2-206ENST00000506734 KRTAP9-9Q9BYP9 154 aa8.53□□□□□ -1.04
SMN2-206ENST00000506734 KRTAP9-4Q9BYQ2 154 aa8.53□□□□□ -1.04
SMN2-206ENST00000506734 LORP23490 312 aaPredicted RBP8.52□□□□□ -1.04
SMN2-206ENST00000506734 R4GN34 69 aa8.5□□□□□ -1.05
SMN2-206ENST00000506734 A0A0D9SG42 100 aa8.45□□□□□ -1.06
SMN2-206ENST00000506734 CRIPTQ9P021 101 aa8.45□□□□□ -1.06
SMN2-206ENST00000506734 PMAIP1Q13794 54 aa8.43□□□□□ -1.06
SMN2-206ENST00000506734 A6NN06 94 aa8.41□□□□□ -1.06
SMN2-206ENST00000506734 KRTAP4-12Q9BQ66 201 aa8.39□□□□□ -1.07
SMN2-206ENST00000506734 KRTAP9-8Q9BYQ0 159 aa8.38□□□□□ -1.07
SMN2-206ENST00000506734 K7ERS5 55 aa8.37□□□□□ -1.07
SMN2-206ENST00000506734 MT2AP02795 61 aa8.36□□□□□ -1.07
SMN2-206ENST00000506734 KRTAP4-7Q9BYR0 210 aa8.33□□□□□ -1.08
SMN2-206ENST00000506734 KRTAP12-1P59990 96 aa8.32□□□□□ -1.08
SMN2-206ENST00000506734 LINC01554Q52M75 96 aa8.31□□□□□ -1.08
SMN2-206ENST00000506734 MT1FP04733 61 aa8.31□□□□□ -1.08
SMN2-206ENST00000506734 KRTAP12-2P59991 146 aa8.3□□□□□ -1.08
SMN2-206ENST00000506734 KRTAP10-10P60014 251 aa8.27□□□□□ -1.09
SMN2-206ENST00000506734 SPRR2GQ9BYE4 73 aa8.26□□□□□ -1.09
SMN2-206ENST00000506734 SPINT4Q6UDR6 99 aa8.25□□□□□ -1.09
SMN2-206ENST00000506734 KRTAP19-1Q8IUB9 90 aa8.21□□□□□ -1.1
SMN2-206ENST00000506734 KTN1-AS1Q86SY8 53 aa8.13□□□□□ -1.11
SMN2-206ENST00000506734 KRTAP9-3Q9BYQ3 159 aa8.08□□□□□ -1.12
SMN2-206ENST00000506734 LCE1DQ5T752 114 aa8.07□□□□□ -1.12
SMN2-206ENST00000506734 ROMO1P60602 79 aa8.05□□□□□ -1.12
SMN2-206ENST00000506734 KRTAP19-8Q3LI54 63 aa8.03□□□□□ -1.12
SMN2-206ENST00000506734 KRTAP4-2Q9BYR5 136 aa8.01□□□□□ -1.13
SMN2-206ENST00000506734 CAMK2N1Q7Z7J9 78 aa7.96□□□□□ -1.14
SMN2-206ENST00000506734 PLAC4Q8WY50 150 aa7.96□□□□□ -1.14
SMN2-206ENST00000506734 KRTAP4-9Q9BYQ8 210 aa7.95□□□□□ -1.14
SMN2-206ENST00000506734 MT1BP07438 61 aa7.89□□□□□ -1.15
SMN2-206ENST00000506734 PRAC1Q96KF2 57 aa7.88□□□□□ -1.15
SMN2-206ENST00000506734 C10orf95Q9H7T3 257 aa7.87□□□□□ -1.15
SMN2-206ENST00000506734 H3BS24 57 aa7.8□□□□□ -1.16
SMN2-206ENST00000506734 KRTAP5-3Q6L8H2 238 aa7.77□□□□□ -1.17
SMN2-206ENST00000506734 KRTAP25-1Q3LHN0 102 aa7.72□□□□□ -1.17
SMN2-206ENST00000506734 MT1XP80297 61 aa7.66□□□□□ -1.18
SMN2-206ENST00000506734 KRTAP10-5P60370 271 aa7.65□□□□□ -1.18
SMN2-206ENST00000506734 USH2AO75445 5202 aa7.61□□□□□ -1.19
SMN2-206ENST00000506734 TNP1P09430 55 aa7.61□□□□□ -1.19
SMN2-206ENST00000506734 PRO2289Q9P1D8 64 aa7.56□□□□□ -1.2
SMN2-206ENST00000506734 KRTAP4-11Q9BYQ6 195 aa7.54□□□□□ -1.2
SMN2-206ENST00000506734 KRTAP23-1A1A580 65 aa7.46□□□□□ -1.22
SMN2-206ENST00000506734 PP632Q6XCG6 107 aa7.46□□□□□ -1.22
SMN2-206ENST00000506734 SSPOA2VEC9 5147 aa7.4□□□□□ -1.23
SMN2-206ENST00000506734 KRTAP19-6Q3LI70 58 aa7.35□□□□□ -1.23
SMN2-206ENST00000506734 KRTAP10-7P60409 375 aaPredicted RBP7.34□□□□□ -1.23
SMN2-206ENST00000506734 A0A0A0MQY5 61 aa7.33□□□□□ -1.24
SMN2-206ENST00000506734 KRTAP10-12P60413 245 aa7.29□□□□□ -1.24
SMN2-206ENST00000506734 LCE3AQ5TA76 89 aa7.28□□□□□ -1.24
SMN2-206ENST00000506734 FSIP2Q5CZC0 6907 aa7.17□□□□□ -1.26
SMN2-206ENST00000506734 KRTAP8-1Q8IUC2 63 aa7.16□□□□□ -1.26
SMN2-206ENST00000506734 FCGBPQ9Y6R7 5405 aaPredicted RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms