RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 FLGP20930 4061 aaPredicted RBP4.94□□□□□ -1.62
NR1I3-220ENST00000505005 KRTAP10-6P60371 365 aaPredicted RBP4.93□□□□□ -1.62
NR1I3-220ENST00000505005 H1FX-AS1Q4G0G2 97 aa4.91□□□□□ -1.62
NR1I3-220ENST00000505005 Q5W150 140 aa4.91□□□□□ -1.62
NR1I3-220ENST00000505005 C1orf64Q8NEQ6 169 aa4.91□□□□□ -1.62
NR1I3-220ENST00000505005 LINC00208Q96KT6 92 aa4.91□□□□□ -1.62
NR1I3-220ENST00000505005 KRTAP9-6A0A140TA67 174 aa4.89□□□□□ -1.63
NR1I3-220ENST00000505005 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.89□□□□□ -1.63
NR1I3-220ENST00000505005 ATP5EP56381 51 aaPredicted RBP4.89□□□□□ -1.63
NR1I3-220ENST00000505005 TMEM258P61165 79 aa4.89□□□□□ -1.63
NR1I3-220ENST00000505005 LCE3BQ5TA77 95 aa4.89□□□□□ -1.63
NR1I3-220ENST00000505005 H7BZZ5 65 aa4.88□□□□□ -1.63
NR1I3-220ENST00000505005 SPANXA2-OT1Q8N9U9 137 aa4.87□□□□□ -1.63
NR1I3-220ENST00000505005 SNURFQ9Y675 71 aa4.87□□□□□ -1.63
NR1I3-220ENST00000505005 CYP4F30PQ9H0H9 118 aa4.86□□□□□ -1.63
NR1I3-220ENST00000505005 CYSTM1Q9H1C7 97 aa4.84□□□□□ -1.63
NR1I3-220ENST00000505005 LCE4AQ5TA78 99 aa4.83□□□□□ -1.64
NR1I3-220ENST00000505005 KRTAP9-7A8MTY7 169 aa4.81□□□□□ -1.64
NR1I3-220ENST00000505005 C4orf26Q17RF5 130 aa4.81□□□□□ -1.64
NR1I3-220ENST00000505005 A8MUN3 132 aa4.78□□□□□ -1.64
NR1I3-220ENST00000505005 CSAG1Q6PB30 78 aa4.77□□□□□ -1.65
NR1I3-220ENST00000505005 KRTAP9-8Q9BYQ0 159 aa4.77□□□□□ -1.65
NR1I3-220ENST00000505005 S4R3F8 94 aa4.76□□□□□ -1.65
NR1I3-220ENST00000505005 KRTAP10-10P60014 251 aa4.75□□□□□ -1.65
NR1I3-220ENST00000505005 RPS28P62857 69 aaKnown RBP4.74□□□□□ -1.65
NR1I3-220ENST00000505005 DMAC1Q96GE9 116 aa4.74□□□□□ -1.65
NR1I3-220ENST00000505005 SERP1Q9Y6X1 66 aa4.72□□□□□ -1.65
NR1I3-220ENST00000505005 MT2AP02795 61 aa4.71□□□□□ -1.66
NR1I3-220ENST00000505005 ACYP2P14621 99 aa4.7□□□□□ -1.66
NR1I3-220ENST00000505005 CRCT1Q9UGL9 99 aa4.69□□□□□ -1.66
NR1I3-220ENST00000505005 KRTAP9-9Q9BYP9 154 aa4.68□□□□□ -1.66
NR1I3-220ENST00000505005 KRTAP9-4Q9BYQ2 154 aa4.68□□□□□ -1.66
NR1I3-220ENST00000505005 LCA10Q71F78 164 aa4.66□□□□□ -1.66
NR1I3-220ENST00000505005 MT1FP04733 61 aa4.64□□□□□ -1.67
NR1I3-220ENST00000505005 COA5Q86WW8 74 aa4.64□□□□□ -1.67
NR1I3-220ENST00000505005 KRTAP9-3Q9BYQ3 159 aa4.64□□□□□ -1.67
NR1I3-220ENST00000505005 KRTAP15-1Q3LI76 137 aa4.63□□□□□ -1.67
NR1I3-220ENST00000505005 CRIPTQ9P021 101 aa4.63□□□□□ -1.67
NR1I3-220ENST00000505005 A0A0A0MQY5 61 aa4.62□□□□□ -1.67
NR1I3-220ENST00000505005 H0YAA0 97 aa4.61□□□□□ -1.67
NR1I3-220ENST00000505005 FSIP2Q5CZC0 6907 aa4.6□□□□□ -1.67
NR1I3-220ENST00000505005 SPTSSBQ8NFR3 76 aa4.6□□□□□ -1.67
NR1I3-220ENST00000505005 SMIM26A0A096LP01 95 aa4.59□□□□□ -1.67
NR1I3-220ENST00000505005 CHKB-CPT1BH3BT56 60 aa4.59□□□□□ -1.67
NR1I3-220ENST00000505005 LCE1DQ5T752 114 aa4.57□□□□□ -1.68
NR1I3-220ENST00000505005 KRTAP4-8A0A0G2JLE6 195 aa4.56□□□□□ -1.68
NR1I3-220ENST00000505005 V9GYY9 64 aa4.56□□□□□ -1.68
NR1I3-220ENST00000505005 Q1T7F1 81 aa4.52□□□□□ -1.69
NR1I3-220ENST00000505005 LCE5AQ5TCM9 118 aa4.52□□□□□ -1.69
NR1I3-220ENST00000505005 SPRR2GQ9BYE4 73 aa4.49□□□□□ -1.69
NR1I3-220ENST00000505005 LINC01558Q9Y6Z2 57 aa4.49□□□□□ -1.69
NR1I3-220ENST00000505005 Q5VV11 94 aa4.47□□□□□ -1.69
NR1I3-220ENST00000505005 KRTAP19-6Q3LI70 58 aa4.45□□□□□ -1.7
NR1I3-220ENST00000505005 ADM2Q7Z4H4 148 aa4.45□□□□□ -1.7
NR1I3-220ENST00000505005 PRR15LQ9BU68 103 aa4.44□□□□□ -1.7
NR1I3-220ENST00000505005 USH2AO75445 5202 aa4.44□□□□□ -1.7
NR1I3-220ENST00000505005 SEC61GP60059 68 aa4.42□□□□□ -1.7
NR1I3-220ENST00000505005 R4GN34 69 aa4.42□□□□□ -1.7
NR1I3-220ENST00000505005 KRTAP19-8Q3LI54 63 aa4.41□□□□□ -1.7
NR1I3-220ENST00000505005 A0A1B0GU69 56 aa4.4□□□□□ -1.71
NR1I3-220ENST00000505005 KRTAP4-9Q9BYQ8 210 aa4.37□□□□□ -1.71
NR1I3-220ENST00000505005 KRTAP4-7Q9BYR0 210 aa4.37□□□□□ -1.71
NR1I3-220ENST00000505005 PLAC4Q8WY50 150 aa4.36□□□□□ -1.71
NR1I3-220ENST00000505005 A6NN06 94 aa4.35□□□□□ -1.71
NR1I3-220ENST00000505005 SSPOA2VEC9 5147 aa4.34□□□□□ -1.71
NR1I3-220ENST00000505005 M0QZ58 72 aa4.34□□□□□ -1.71
NR1I3-220ENST00000505005 PRO2289Q9P1D8 64 aa4.34□□□□□ -1.71
NR1I3-220ENST00000505005 PSPHP1O15172 72 aa4.33□□□□□ -1.72
NR1I3-220ENST00000505005 MT1BP07438 61 aa4.31□□□□□ -1.72
NR1I3-220ENST00000505005 UQCR11O14957 56 aa4.3□□□□□ -1.72
NR1I3-220ENST00000505005 FCGBPQ9Y6R7 5405 aaPredicted RBP4.29□□□□□ -1.72
NR1I3-220ENST00000505005 P0C880 135 aa4.29□□□□□ -1.72
NR1I3-220ENST00000505005 KRTAP4-11Q9BYQ6 195 aa4.28□□□□□ -1.72
NR1I3-220ENST00000505005 A0A1B0GU33 70 aa4.27□□□□□ -1.73
NR1I3-220ENST00000505005 KRTAP10-5P60370 271 aa4.26□□□□□ -1.73
NR1I3-220ENST00000505005 A6NED7 52 aa4.25□□□□□ -1.73
NR1I3-220ENST00000505005 CDC42SE1Q9NRR8 79 aa4.23□□□□□ -1.73
NR1I3-220ENST00000505005 LINC01554Q52M75 96 aa4.22□□□□□ -1.73
NR1I3-220ENST00000505005 SPATA8Q6RVD6 105 aa4.22□□□□□ -1.73
NR1I3-220ENST00000505005 MIR22HGQ0VDD5 57 aa4.21□□□□□ -1.74
NR1I3-220ENST00000505005 MACF1Q9UPN3 7388 aaKnown RBP4.18□□□□□ -1.74
NR1I3-220ENST00000505005 KRTAP6-3Q3LI67 103 aa4.17□□□□□ -1.74
NR1I3-220ENST00000505005 BRK1Q8WUW1 75 aa4.16□□□□□ -1.74
NR1I3-220ENST00000505005 KRTAP4-2Q9BYR5 136 aa4.15□□□□□ -1.75
NR1I3-220ENST00000505005 KRTAP13-4Q3LI77 160 aa4.13□□□□□ -1.75
NR1I3-220ENST00000505005 PRO0628Q9UI54 55 aa4.13□□□□□ -1.75
NR1I3-220ENST00000505005 SYNE2Q8WXH0 6885 aaKnown RBP4.1□□□□□ -1.75
NR1I3-220ENST00000505005 K7ERS5 55 aa4.09□□□□□ -1.75
NR1I3-220ENST00000505005 KRTAP12-2P59991 146 aa4.09□□□□□ -1.75
NR1I3-220ENST00000505005 CAMK2N1Q7Z7J9 78 aa4.09□□□□□ -1.75
NR1I3-220ENST00000505005 MT1XP80297 61 aa4.08□□□□□ -1.76
NR1I3-220ENST00000505005 A8MU10 97 aa4.05□□□□□ -1.76
NR1I3-220ENST00000505005 A0A0D9SG42 100 aa4.02□□□□□ -1.77
NR1I3-220ENST00000505005 KRTAP12-1P59990 96 aa4.02□□□□□ -1.77
NR1I3-220ENST00000505005 KRTAP5-9P26371 169 aa4.01□□□□□ -1.77
NR1I3-220ENST00000505005 SPINT4Q6UDR6 99 aa4□□□□□ -1.77
NR1I3-220ENST00000505005 KRTAP8-1Q8IUC2 63 aa3.97□□□□□ -1.77
NR1I3-220ENST00000505005 PMAIP1Q13794 54 aa3.95□□□□□ -1.78
NR1I3-220ENST00000505005 KRTAP10-12P60413 245 aa3.94□□□□□ -1.78
NR1I3-220ENST00000505005 SPRR2FQ96RM1 72 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 308 ms