RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 TPRXLQ17RH7 258 aa5.18□□□□□ -1.58
COL1A1-210ENST00000504289 COX6B2Q6YFQ2 88 aa5.18□□□□□ -1.58
COL1A1-210ENST00000504289 LCA10Q71F78 164 aa5.18□□□□□ -1.58
COL1A1-210ENST00000504289 A6NED7 52 aa5.16□□□□□ -1.58
COL1A1-210ENST00000504289 A0A1B0GU69 56 aa5.15□□□□□ -1.59
COL1A1-210ENST00000504289 KRTAP3-1Q9BYR8 98 aa5.13□□□□□ -1.59
COL1A1-210ENST00000504289 MYCBP2O75592 4640 aa5.12□□□□□ -1.59
COL1A1-210ENST00000504289 A8MU10 97 aa5.11□□□□□ -1.59
COL1A1-210ENST00000504289 UQCR11O14957 56 aa5.07□□□□□ -1.6
COL1A1-210ENST00000504289 UBR4Q5T4S7 5183 aa5.04□□□□□ -1.6
COL1A1-210ENST00000504289 SPATA8Q6RVD6 105 aa5.04□□□□□ -1.6
COL1A1-210ENST00000504289 J3QL48 77 aa5.01□□□□□ -1.61
COL1A1-210ENST00000504289 SEC61BP60468 96 aaKnown RBP5.01□□□□□ -1.61
COL1A1-210ENST00000504289 MIR22HGQ0VDD5 57 aa4.99□□□□□ -1.61
COL1A1-210ENST00000504289 H1FX-AS1Q4G0G2 97 aa4.99□□□□□ -1.61
COL1A1-210ENST00000504289 S4R3F8 94 aa4.97□□□□□ -1.61
COL1A1-210ENST00000504289 HMCN2Q8NDA2 5059 aa4.97□□□□□ -1.61
COL1A1-210ENST00000504289 LINC01554Q52M75 96 aa4.96□□□□□ -1.62
COL1A1-210ENST00000504289 A0A1B0GU33 70 aa4.94□□□□□ -1.62
COL1A1-210ENST00000504289 KRTAP3-3Q9BYR6 98 aa4.94□□□□□ -1.62
COL1A1-210ENST00000504289 LRP2P98164 4655 aa4.91□□□□□ -1.62
COL1A1-210ENST00000504289 CSAG1Q6PB30 78 aa4.88□□□□□ -1.63
COL1A1-210ENST00000504289 H0YAA0 97 aa4.85□□□□□ -1.63
COL1A1-210ENST00000504289 KRTAP10-6P60371 365 aaPredicted RBP4.84□□□□□ -1.63
COL1A1-210ENST00000504289 PRAC1Q96KF2 57 aa4.84□□□□□ -1.63
COL1A1-210ENST00000504289 KRTAP3-2Q9BYR7 98 aa4.83□□□□□ -1.64
COL1A1-210ENST00000504289 H3BS24 57 aa4.82□□□□□ -1.64
COL1A1-210ENST00000504289 LCE2DQ5TA82 110 aaPredicted RBP4.82□□□□□ -1.64
COL1A1-210ENST00000504289 MUC17Q685J3 4493 aa4.8□□□□□ -1.64
COL1A1-210ENST00000504289 RNF213Q63HN8 5207 aa4.8□□□□□ -1.64
COL1A1-210ENST00000504289 LPAP08519 4548 aa4.8□□□□□ -1.64
COL1A1-210ENST00000504289 K7ERS5 55 aa4.79□□□□□ -1.64
COL1A1-210ENST00000504289 ADM2Q7Z4H4 148 aa4.78□□□□□ -1.64
COL1A1-210ENST00000504289 M0QZ58 72 aa4.76□□□□□ -1.65
COL1A1-210ENST00000504289 KRTAP4-1Q9BYQ7 146 aa4.74□□□□□ -1.65
COL1A1-210ENST00000504289 P0C880 135 aa4.73□□□□□ -1.65
COL1A1-210ENST00000504289 KRTAP19-2Q3LHN2 52 aa4.71□□□□□ -1.66
COL1A1-210ENST00000504289 KRTAP13-4Q3LI77 160 aa4.68□□□□□ -1.66
COL1A1-210ENST00000504289 KRTAP25-1Q3LHN0 102 aa4.66□□□□□ -1.66
COL1A1-210ENST00000504289 FLGP20930 4061 aaPredicted RBP4.65□□□□□ -1.66
COL1A1-210ENST00000504289 KRTAP9-2Q9BYQ4 174 aa4.64□□□□□ -1.67
COL1A1-210ENST00000504289 ROMO1P60602 79 aa4.63□□□□□ -1.67
COL1A1-210ENST00000504289 A0A0D9SG42 100 aa4.6□□□□□ -1.67
COL1A1-210ENST00000504289 R4GN34 69 aa4.6□□□□□ -1.67
COL1A1-210ENST00000504289 CRIPTQ9P021 101 aa4.59□□□□□ -1.67
COL1A1-210ENST00000504289 KRTAP12-1P59990 96 aa4.57□□□□□ -1.68
COL1A1-210ENST00000504289 KRTAP9-6A0A140TA67 174 aa4.56□□□□□ -1.68
COL1A1-210ENST00000504289 LCE2AQ5TA79 106 aaPredicted RBP4.54□□□□□ -1.68
COL1A1-210ENST00000504289 KRTAP12-2P59991 146 aa4.53□□□□□ -1.68
COL1A1-210ENST00000504289 LCE2CQ5TA81 110 aa4.51□□□□□ -1.69
COL1A1-210ENST00000504289 SPINT4Q6UDR6 99 aa4.51□□□□□ -1.69
COL1A1-210ENST00000504289 MUC2Q02817 5179 aa4.5□□□□□ -1.69
COL1A1-210ENST00000504289 FAT4Q6V0I7 4981 aa4.5□□□□□ -1.69
COL1A1-210ENST00000504289 LORP23490 312 aaPredicted RBP4.45□□□□□ -1.7
COL1A1-210ENST00000504289 MT1HP80294 61 aa4.4□□□□□ -1.71
COL1A1-210ENST00000504289 M0R2T5 61 aa4.37□□□□□ -1.71
COL1A1-210ENST00000504289 SPRR2GQ9BYE4 73 aa4.37□□□□□ -1.71
COL1A1-210ENST00000504289 CAMK2N1Q7Z7J9 78 aa4.33□□□□□ -1.72
COL1A1-210ENST00000504289 KRTAP15-1Q3LI76 137 aa4.32□□□□□ -1.72
COL1A1-210ENST00000504289 CRCT1Q9UGL9 99 aa4.32□□□□□ -1.72
COL1A1-210ENST00000504289 C10orf95Q9H7T3 257 aa4.3□□□□□ -1.72
COL1A1-210ENST00000504289 MT2AP02795 61 aa4.28□□□□□ -1.72
COL1A1-210ENST00000504289 KRTAP19-1Q8IUB9 90 aa4.28□□□□□ -1.72
COL1A1-210ENST00000504289 KRTAP9-8Q9BYQ0 159 aa4.28□□□□□ -1.72
COL1A1-210ENST00000504289 PLAC4Q8WY50 150 aa4.27□□□□□ -1.73
COL1A1-210ENST00000504289 KRTAP10-10P60014 251 aa4.26□□□□□ -1.73
COL1A1-210ENST00000504289 FSIP2Q5CZC0 6907 aa4.26□□□□□ -1.73
COL1A1-210ENST00000504289 PP632Q6XCG6 107 aa4.25□□□□□ -1.73
COL1A1-210ENST00000504289 MT1FP04733 61 aa4.24□□□□□ -1.73
COL1A1-210ENST00000504289 KRTAP23-1A1A580 65 aa4.23□□□□□ -1.73
COL1A1-210ENST00000504289 NDUFAF8A1L188 74 aa4.22□□□□□ -1.73
COL1A1-210ENST00000504289 KRTAP19-8Q3LI54 63 aa4.22□□□□□ -1.73
COL1A1-210ENST00000504289 TNP1P09430 55 aa4.19□□□□□ -1.74
COL1A1-210ENST00000504289 KRTAP9-3Q9BYQ3 159 aa4.13□□□□□ -1.75
COL1A1-210ENST00000504289 LCE2BO14633 110 aa4.11□□□□□ -1.75
COL1A1-210ENST00000504289 A0A0A0MQY5 61 aa4.1□□□□□ -1.75
COL1A1-210ENST00000504289 MT1BP07438 61 aa4.08□□□□□ -1.76
COL1A1-210ENST00000504289 KRTAP9-7A8MTY7 169 aa4.07□□□□□ -1.76
COL1A1-210ENST00000504289 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.06□□□□□ -1.76
COL1A1-210ENST00000504289 PRO2289Q9P1D8 64 aa4.02□□□□□ -1.77
COL1A1-210ENST00000504289 KRTAP10-5P60370 271 aa4□□□□□ -1.77
COL1A1-210ENST00000504289 MT1XP80297 61 aa4□□□□□ -1.77
COL1A1-210ENST00000504289 LUZP6Q538Z0 58 aa4□□□□□ -1.77
COL1A1-210ENST00000504289 SSPOA2VEC9 5147 aa3.94□□□□□ -1.78
COL1A1-210ENST00000504289 KRTAP8-1Q8IUC2 63 aa3.92□□□□□ -1.78
COL1A1-210ENST00000504289 USH2AO75445 5202 aa3.91□□□□□ -1.78
COL1A1-210ENST00000504289 LCE3AQ5TA76 89 aa3.89□□□□□ -1.79
COL1A1-210ENST00000504289 FCGBPQ9Y6R7 5405 aaPredicted RBP3.89□□□□□ -1.79
COL1A1-210ENST00000504289 KRTAP10-12P60413 245 aa3.88□□□□□ -1.79
COL1A1-210ENST00000504289 SPRR5A0A1B0GTR4 108 aa3.81□□□□□ -1.8
COL1A1-210ENST00000504289 KRTAP10-7P60409 375 aaPredicted RBP3.8□□□□□ -1.8
COL1A1-210ENST00000504289 KRTAP12-3P60328 96 aa3.78□□□□□ -1.8
COL1A1-210ENST00000504289 SYNE2Q8WXH0 6885 aaKnown RBP3.75□□□□□ -1.81
COL1A1-210ENST00000504289 KRTAP19-6Q3LI70 58 aa3.73□□□□□ -1.81
COL1A1-210ENST00000504289 KRTAP19-4Q3LI73 84 aa3.72□□□□□ -1.81
COL1A1-210ENST00000504289 MACF1Q9UPN3 7388 aaKnown RBP3.72□□□□□ -1.81
COL1A1-210ENST00000504289 KRTAP6-3Q3LI67 103 aa3.69□□□□□ -1.82
COL1A1-210ENST00000504289 KRTAP19-5Q3LI72 72 aa3.64□□□□□ -1.83
COL1A1-210ENST00000504289 INE1O15225 51 aa3.61□□□□□ -1.83
COL1A1-210ENST00000504289 NEBP20929 6669 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms