RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 USH2AO75445 5202 aa7.33□□□□□ -1.24
NUP50-219ENST00000497960 KRTAP3-1Q9BYR8 98 aa7.31□□□□□ -1.24
NUP50-219ENST00000497960 SERP2Q8N6R1 65 aa7.3□□□□□ -1.24
NUP50-219ENST00000497960 S4R3F8 94 aa7.28□□□□□ -1.24
NUP50-219ENST00000497960 SSPOA2VEC9 5147 aa7.28□□□□□ -1.24
NUP50-219ENST00000497960 C20orf197Q8N268 126 aa7.24□□□□□ -1.25
NUP50-219ENST00000497960 SNURFQ9Y675 71 aa7.24□□□□□ -1.25
NUP50-219ENST00000497960 A8MUN3 132 aa7.23□□□□□ -1.25
NUP50-219ENST00000497960 KRTAP19-1Q8IUB9 90 aa7.22□□□□□ -1.25
NUP50-219ENST00000497960 LCA10Q71F78 164 aa7.21□□□□□ -1.26
NUP50-219ENST00000497960 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.19□□□□□ -1.26
NUP50-219ENST00000497960 COX7CP15954 63 aa7.18□□□□□ -1.26
NUP50-219ENST00000497960 DMAC1Q96GE9 116 aa7.16□□□□□ -1.26
NUP50-219ENST00000497960 ANAPC13Q9BS18 74 aa7.16□□□□□ -1.26
NUP50-219ENST00000497960 CSAG1Q6PB30 78 aa7.13□□□□□ -1.27
NUP50-219ENST00000497960 FCGBPQ9Y6R7 5405 aaPredicted RBP7.12□□□□□ -1.27
NUP50-219ENST00000497960 KRTAP9-7A8MTY7 169 aa7.1□□□□□ -1.27
NUP50-219ENST00000497960 NDUFC1O43677 76 aa7.09□□□□□ -1.27
NUP50-219ENST00000497960 KRTAP19-6Q3LI70 58 aa7.09□□□□□ -1.27
NUP50-219ENST00000497960 SPANXA2-OT1Q8N9U9 137 aa7.07□□□□□ -1.28
NUP50-219ENST00000497960 ACYP2P14621 99 aa7.05□□□□□ -1.28
NUP50-219ENST00000497960 CHKB-CPT1BH3BT56 60 aa6.99□□□□□ -1.29
NUP50-219ENST00000497960 CYSTM1Q9H1C7 97 aa6.99□□□□□ -1.29
NUP50-219ENST00000497960 CCDC179H3BU77 68 aa6.98□□□□□ -1.29
NUP50-219ENST00000497960 H7BZZ5 65 aa6.98□□□□□ -1.29
NUP50-219ENST00000497960 LOC100996750A0A140TA64 210 aa6.95□□□□□ -1.3
NUP50-219ENST00000497960 KRTAP4-6Q9BYQ5 205 aa6.95□□□□□ -1.3
NUP50-219ENST00000497960 SPTSSBQ8NFR3 76 aa6.93□□□□□ -1.3
NUP50-219ENST00000497960 MACF1Q9UPN3 7388 aaKnown RBP6.92□□□□□ -1.3
NUP50-219ENST00000497960 H0YAA0 97 aa6.91□□□□□ -1.3
NUP50-219ENST00000497960 PCP4P48539 62 aa6.91□□□□□ -1.3
NUP50-219ENST00000497960 SPRR2GQ9BYE4 73 aa6.9□□□□□ -1.3
NUP50-219ENST00000497960 Q5VV11 94 aa6.89□□□□□ -1.31
NUP50-219ENST00000497960 ADM2Q7Z4H4 148 aa6.88□□□□□ -1.31
NUP50-219ENST00000497960 COA5Q86WW8 74 aa6.88□□□□□ -1.31
NUP50-219ENST00000497960 KRTAP19-8Q3LI54 63 aa6.86□□□□□ -1.31
NUP50-219ENST00000497960 MT1BP07438 61 aa6.84□□□□□ -1.31
NUP50-219ENST00000497960 CRIPTQ9P021 101 aa6.84□□□□□ -1.31
NUP50-219ENST00000497960 SYNE2Q8WXH0 6885 aaKnown RBP6.83□□□□□ -1.32
NUP50-219ENST00000497960 A6NN06 94 aa6.81□□□□□ -1.32
NUP50-219ENST00000497960 ATP5EP56381 51 aaPredicted RBP6.81□□□□□ -1.32
NUP50-219ENST00000497960 TMEM258P61165 79 aa6.76□□□□□ -1.33
NUP50-219ENST00000497960 P0C880 135 aa6.74□□□□□ -1.33
NUP50-219ENST00000497960 KRTAP6-3Q3LI67 103 aa6.74□□□□□ -1.33
NUP50-219ENST00000497960 KRTAP10-5P60370 271 aa6.7□□□□□ -1.34
NUP50-219ENST00000497960 R4GN34 69 aa6.68□□□□□ -1.34
NUP50-219ENST00000497960 M0QZ58 72 aa6.66□□□□□ -1.34
NUP50-219ENST00000497960 SEC61GP60059 68 aa6.63□□□□□ -1.35
NUP50-219ENST00000497960 SERP1Q9Y6X1 66 aa6.6□□□□□ -1.35
NUP50-219ENST00000497960 LINC01554Q52M75 96 aa6.55□□□□□ -1.36
NUP50-219ENST00000497960 A0A1B0GU69 56 aa6.53□□□□□ -1.36
NUP50-219ENST00000497960 PLAC4Q8WY50 150 aa6.53□□□□□ -1.36
NUP50-219ENST00000497960 PRO2289Q9P1D8 64 aa6.51□□□□□ -1.37
NUP50-219ENST00000497960 KRTAP13-4Q3LI77 160 aa6.46□□□□□ -1.38
NUP50-219ENST00000497960 PRR15LQ9BU68 103 aa6.45□□□□□ -1.38
NUP50-219ENST00000497960 KRTAP4-8Q9BYQ9 185 aa6.45□□□□□ -1.38
NUP50-219ENST00000497960 NEBP20929 6669 aa6.45□□□□□ -1.38
NUP50-219ENST00000497960 A0A1B0GU33 70 aa6.44□□□□□ -1.38
NUP50-219ENST00000497960 MT1XP80297 61 aa6.43□□□□□ -1.38
NUP50-219ENST00000497960 LINC01558Q9Y6Z2 57 aa6.43□□□□□ -1.38
NUP50-219ENST00000497960 KRTAP5-9P26371 169 aa6.42□□□□□ -1.38
NUP50-219ENST00000497960 SPATA8Q6RVD6 105 aa6.38□□□□□ -1.39
NUP50-219ENST00000497960 MUC12Q9UKN1 5478 aa6.37□□□□□ -1.39
NUP50-219ENST00000497960 A0A0D9SG42 100 aa6.34□□□□□ -1.39
NUP50-219ENST00000497960 V9GYY9 64 aa6.31□□□□□ -1.4
NUP50-219ENST00000497960 KMT2DO14686 5537 aa6.3□□□□□ -1.4
NUP50-219ENST00000497960 SMIM26A0A096LP01 95 aa6.28□□□□□ -1.4
NUP50-219ENST00000497960 KRTAP12-2P59991 146 aa6.28□□□□□ -1.4
NUP50-219ENST00000497960 SPRR2FQ96RM1 72 aa6.26□□□□□ -1.41
NUP50-219ENST00000497960 Q1T7F1 81 aa6.25□□□□□ -1.41
NUP50-219ENST00000497960 KRTAP20-1Q3LI63 56 aa6.25□□□□□ -1.41
NUP50-219ENST00000497960 KRTAP8-1Q8IUC2 63 aa6.25□□□□□ -1.41
NUP50-219ENST00000497960 RPS28P62857 69 aaKnown RBP6.24□□□□□ -1.41
NUP50-219ENST00000497960 LCE3BQ5TA77 95 aa6.23□□□□□ -1.41
NUP50-219ENST00000497960 SPINT4Q6UDR6 99 aa6.23□□□□□ -1.41
NUP50-219ENST00000497960 A8MU10 97 aa6.22□□□□□ -1.41
NUP50-219ENST00000497960 UQCR11O14957 56 aa6.22□□□□□ -1.41
NUP50-219ENST00000497960 PSPHP1O15172 72 aa6.22□□□□□ -1.41
NUP50-219ENST00000497960 CAMK2N1Q7Z7J9 78 aa6.22□□□□□ -1.41
NUP50-219ENST00000497960 KRTAP4-12Q9BQ66 201 aa6.21□□□□□ -1.42
NUP50-219ENST00000497960 KRTAP12-1P59990 96 aa6.18□□□□□ -1.42
NUP50-219ENST00000497960 MDN1Q9NU22 5596 aa6.18□□□□□ -1.42
NUP50-219ENST00000497960 SPRR2EP22531 72 aa6.17□□□□□ -1.42
NUP50-219ENST00000497960 SPRR2BP35325 72 aa6.17□□□□□ -1.42
NUP50-219ENST00000497960 SPRR2AP35326 72 aa6.17□□□□□ -1.42
NUP50-219ENST00000497960 KRTAP4-8A0A0G2JLE6 195 aa6.14□□□□□ -1.43
NUP50-219ENST00000497960 KRTAP10-7P60409 375 aaPredicted RBP6.13□□□□□ -1.43
NUP50-219ENST00000497960 H3BS24 57 aa6.12□□□□□ -1.43
NUP50-219ENST00000497960 MIR22HGQ0VDD5 57 aa6.12□□□□□ -1.43
NUP50-219ENST00000497960 KRTAP10-12P60413 245 aa6.11□□□□□ -1.43
NUP50-219ENST00000497960 KRTAP2-3P0C7H8 128 aa6.09□□□□□ -1.43
NUP50-219ENST00000497960 KRTAP2-4Q9BYR9 128 aa6.09□□□□□ -1.43
NUP50-219ENST00000497960 LCE1AQ5T7P2 110 aa6.06□□□□□ -1.44
NUP50-219ENST00000497960 A6NED7 52 aa6.05□□□□□ -1.44
NUP50-219ENST00000497960 KRTAP9-9Q9BYP9 154 aa5.98□□□□□ -1.45
NUP50-219ENST00000497960 KRTAP9-4Q9BYQ2 154 aa5.98□□□□□ -1.45
NUP50-219ENST00000497960 K7ERS5 55 aa5.96□□□□□ -1.46
NUP50-219ENST00000497960 SPRR2DP22532 72 aa5.96□□□□□ -1.46
NUP50-219ENST00000497960 KRTAP19-4Q3LI73 84 aa5.94□□□□□ -1.46
NUP50-219ENST00000497960 KRTAP2-2Q9BYT5 123 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms