RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 LCA10Q71F78 164 aa9.52□□□□□ -0.89
SCAMP3-209ENST00000497470 LORP23490 312 aaPredicted RBP9.51□□□□□ -0.89
SCAMP3-209ENST00000497470 CSAG1Q6PB30 78 aa9.51□□□□□ -0.89
SCAMP3-209ENST00000497470 CYSTM1Q9H1C7 97 aa9.49□□□□□ -0.89
SCAMP3-209ENST00000497470 KRTAP3-3Q9BYR6 98 aa9.48□□□□□ -0.89
SCAMP3-209ENST00000497470 ATP5EP56381 51 aaPredicted RBP9.43□□□□□ -0.9
SCAMP3-209ENST00000497470 KRTAP9-8Q9BYQ0 159 aa9.39□□□□□ -0.91
SCAMP3-209ENST00000497470 SPTSSBQ8NFR3 76 aa9.38□□□□□ -0.91
SCAMP3-209ENST00000497470 TMEM258P61165 79 aa9.36□□□□□ -0.91
SCAMP3-209ENST00000497470 H0YAA0 97 aa9.35□□□□□ -0.91
SCAMP3-209ENST00000497470 CHKB-CPT1BH3BT56 60 aa9.31□□□□□ -0.92
SCAMP3-209ENST00000497470 MT2AP02795 61 aa9.28□□□□□ -0.92
SCAMP3-209ENST00000497470 PCP4P48539 62 aa9.28□□□□□ -0.92
SCAMP3-209ENST00000497470 COA5Q86WW8 74 aa9.28□□□□□ -0.92
SCAMP3-209ENST00000497470 MT1FP04733 61 aa9.19□□□□□ -0.94
SCAMP3-209ENST00000497470 KRTAP10-10P60014 251 aa9.18□□□□□ -0.94
SCAMP3-209ENST00000497470 LCE2DQ5TA82 110 aaPredicted RBP9.16□□□□□ -0.94
SCAMP3-209ENST00000497470 CRIPTQ9P021 101 aa9.12□□□□□ -0.95
SCAMP3-209ENST00000497470 KRTAP9-3Q9BYQ3 159 aa9.08□□□□□ -0.96
SCAMP3-209ENST00000497470 ADM2Q7Z4H4 148 aa9.06□□□□□ -0.96
SCAMP3-209ENST00000497470 SERP1Q9Y6X1 66 aa9.06□□□□□ -0.96
SCAMP3-209ENST00000497470 KRTAP3-2Q9BYR7 98 aa9.03□□□□□ -0.96
SCAMP3-209ENST00000497470 SPRR2GQ9BYE4 73 aa8.97□□□□□ -0.97
SCAMP3-209ENST00000497470 SEC61GP60059 68 aa8.95□□□□□ -0.98
SCAMP3-209ENST00000497470 P0C880 135 aa8.94□□□□□ -0.98
SCAMP3-209ENST00000497470 KRTAP9-2Q9BYQ4 174 aa8.92□□□□□ -0.98
SCAMP3-209ENST00000497470 RPS28P62857 69 aaKnown RBP8.91□□□□□ -0.98
SCAMP3-209ENST00000497470 KRTAP19-1Q8IUB9 90 aa8.91□□□□□ -0.98
SCAMP3-209ENST00000497470 M0QZ58 72 aa8.85□□□□□ -0.99
SCAMP3-209ENST00000497470 LINC01558Q9Y6Z2 57 aa8.85□□□□□ -0.99
SCAMP3-209ENST00000497470 LCE2BO14633 110 aa8.84□□□□□ -0.99
SCAMP3-209ENST00000497470 R4GN34 69 aa8.84□□□□□ -0.99
SCAMP3-209ENST00000497470 A0A1B0GU69 56 aa8.81□□□□□ -1
SCAMP3-209ENST00000497470 KRTAP19-8Q3LI54 63 aa8.81□□□□□ -1
SCAMP3-209ENST00000497470 PRR15LQ9BU68 103 aa8.79□□□□□ -1
SCAMP3-209ENST00000497470 V9GYY9 64 aa8.79□□□□□ -1
SCAMP3-209ENST00000497470 SMIM26A0A096LP01 95 aa8.76□□□□□ -1.01
SCAMP3-209ENST00000497470 Q5VV11 94 aa8.76□□□□□ -1.01
SCAMP3-209ENST00000497470 Q1T7F1 81 aa8.72□□□□□ -1.01
SCAMP3-209ENST00000497470 A0A1B0GU33 70 aa8.71□□□□□ -1.02
SCAMP3-209ENST00000497470 A6NN06 94 aa8.64□□□□□ -1.03
SCAMP3-209ENST00000497470 MT1BP07438 61 aa8.64□□□□□ -1.03
SCAMP3-209ENST00000497470 KRTAP13-4Q3LI77 160 aa8.58□□□□□ -1.04
SCAMP3-209ENST00000497470 CRCT1Q9UGL9 99 aa8.56□□□□□ -1.04
SCAMP3-209ENST00000497470 KRTAP19-6Q3LI70 58 aa8.53□□□□□ -1.04
SCAMP3-209ENST00000497470 UQCR11O14957 56 aa8.51□□□□□ -1.05
SCAMP3-209ENST00000497470 PLAC4Q8WY50 150 aa8.51□□□□□ -1.05
SCAMP3-209ENST00000497470 LINC01554Q52M75 96 aa8.5□□□□□ -1.05
SCAMP3-209ENST00000497470 USH2AO75445 5202 aa8.47□□□□□ -1.05
SCAMP3-209ENST00000497470 SPATA8Q6RVD6 105 aa8.47□□□□□ -1.05
SCAMP3-209ENST00000497470 KRTAP9-6A0A140TA67 174 aa8.42□□□□□ -1.06
SCAMP3-209ENST00000497470 PSPHP1O15172 72 aa8.42□□□□□ -1.06
SCAMP3-209ENST00000497470 KRTAP10-5P60370 271 aa8.36□□□□□ -1.07
SCAMP3-209ENST00000497470 A0A0D9SG42 100 aa8.33□□□□□ -1.08
SCAMP3-209ENST00000497470 PRO2289Q9P1D8 64 aa8.33□□□□□ -1.08
SCAMP3-209ENST00000497470 MIR22HGQ0VDD5 57 aa8.32□□□□□ -1.08
SCAMP3-209ENST00000497470 FSIP2Q5CZC0 6907 aa8.31□□□□□ -1.08
SCAMP3-209ENST00000497470 KRTAP12-1P59990 96 aa8.3□□□□□ -1.08
SCAMP3-209ENST00000497470 SSPOA2VEC9 5147 aa8.27□□□□□ -1.08
SCAMP3-209ENST00000497470 A8MU10 97 aa8.26□□□□□ -1.09
SCAMP3-209ENST00000497470 MT1XP80297 61 aa8.25□□□□□ -1.09
SCAMP3-209ENST00000497470 A6NED7 52 aa8.23□□□□□ -1.09
SCAMP3-209ENST00000497470 SPINT4Q6UDR6 99 aa8.21□□□□□ -1.1
SCAMP3-209ENST00000497470 KRTAP12-2P59991 146 aa8.19□□□□□ -1.1
SCAMP3-209ENST00000497470 CAMK2N1Q7Z7J9 78 aa8.19□□□□□ -1.1
SCAMP3-209ENST00000497470 K7ERS5 55 aa8.11□□□□□ -1.11
SCAMP3-209ENST00000497470 CDC42SE1Q9NRR8 79 aa8.09□□□□□ -1.11
SCAMP3-209ENST00000497470 FCGBPQ9Y6R7 5405 aaPredicted RBP8.08□□□□□ -1.12
SCAMP3-209ENST00000497470 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.92□□□□□ -1.14
SCAMP3-209ENST00000497470 KRTAP10-12P60413 245 aa7.9□□□□□ -1.14
SCAMP3-209ENST00000497470 C10orf95Q9H7T3 257 aa7.85□□□□□ -1.15
SCAMP3-209ENST00000497470 KRTAP10-7P60409 375 aaPredicted RBP7.83□□□□□ -1.16
SCAMP3-209ENST00000497470 TNP1P09430 55 aa7.79□□□□□ -1.16
SCAMP3-209ENST00000497470 BRK1Q8WUW1 75 aa7.74□□□□□ -1.17
SCAMP3-209ENST00000497470 KRTAP25-1Q3LHN0 102 aa7.71□□□□□ -1.18
SCAMP3-209ENST00000497470 KRTAP6-3Q3LI67 103 aa7.7□□□□□ -1.18
SCAMP3-209ENST00000497470 MACF1Q9UPN3 7388 aaKnown RBP7.68□□□□□ -1.18
SCAMP3-209ENST00000497470 KRTAP9-7A8MTY7 169 aa7.65□□□□□ -1.18
SCAMP3-209ENST00000497470 ROMO1P60602 79 aa7.64□□□□□ -1.19
SCAMP3-209ENST00000497470 KRTAP5-9P26371 169 aa7.63□□□□□ -1.19
SCAMP3-209ENST00000497470 KRTAP8-1Q8IUC2 63 aa7.62□□□□□ -1.19
SCAMP3-209ENST00000497470 KRTAP4-8A0A0G2JLE6 195 aa7.61□□□□□ -1.19
SCAMP3-209ENST00000497470 KRTAP4-8Q9BYQ9 185 aa7.61□□□□□ -1.19
SCAMP3-209ENST00000497470 KRTAP23-1A1A580 65 aa7.57□□□□□ -1.2
SCAMP3-209ENST00000497470 PRO0628Q9UI54 55 aa7.44□□□□□ -1.22
SCAMP3-209ENST00000497470 LCE3AQ5TA76 89 aa7.43□□□□□ -1.22
SCAMP3-209ENST00000497470 SPRR2FQ96RM1 72 aa7.41□□□□□ -1.22
SCAMP3-209ENST00000497470 PP632Q6XCG6 107 aa7.38□□□□□ -1.23
SCAMP3-209ENST00000497470 SYNE2Q8WXH0 6885 aaKnown RBP7.38□□□□□ -1.23
SCAMP3-209ENST00000497470 PMAIP1Q13794 54 aa7.37□□□□□ -1.23
SCAMP3-209ENST00000497470 KRTAP19-7Q3SYF9 63 aa7.37□□□□□ -1.23
SCAMP3-209ENST00000497470 KMT2DO14686 5537 aa7.37□□□□□ -1.23
SCAMP3-209ENST00000497470 KRTAP19-5Q3LI72 72 aa7.29□□□□□ -1.24
SCAMP3-209ENST00000497470 MT1EP04732 61 aa7.28□□□□□ -1.24
SCAMP3-209ENST00000497470 KRTAP12-3P60328 96 aa7.22□□□□□ -1.25
SCAMP3-209ENST00000497470 LCE1AQ5T7P2 110 aa7.21□□□□□ -1.26
SCAMP3-209ENST00000497470 SPRR2EP22531 72 aa7.15□□□□□ -1.26
SCAMP3-209ENST00000497470 SPRR2BP35325 72 aa7.15□□□□□ -1.26
SCAMP3-209ENST00000497470 SPRR2AP35326 72 aa7.15□□□□□ -1.26
SCAMP3-209ENST00000497470 KRTAP19-4Q3LI73 84 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms