RNA–Protein interactions for RNA: ENST00000497232.5

CCDC142-209, Transcript of coiled-coil domain containing 142, humanhuman

TSL 3

Gene CCDC142, Length 671 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-209ENST00000497232 KRTAP3-1Q9BYR8 98 aa5.48□□□□□ -1.53
CCDC142-209ENST00000497232 A0A0U1RQV1 116 aa5.47□□□□□ -1.53
CCDC142-209ENST00000497232 KLKP1Q107X0 134 aa5.47□□□□□ -1.53
CCDC142-209ENST00000497232 MP68P56378 58 aa5.46□□□□□ -1.54
CCDC142-209ENST00000497232 SVIPQ8NHG7 77 aa5.45□□□□□ -1.54
CCDC142-209ENST00000497232 MT1HP80294 61 aa5.44□□□□□ -1.54
CCDC142-209ENST00000497232 C4orf26Q17RF5 130 aa5.44□□□□□ -1.54
CCDC142-209ENST00000497232 LCE5AQ5TCM9 118 aa5.44□□□□□ -1.54
CCDC142-209ENST00000497232 COX6B2Q6YFQ2 88 aa5.43□□□□□ -1.54
CCDC142-209ENST00000497232 COX7CP15954 63 aa5.42□□□□□ -1.54
CCDC142-209ENST00000497232 KRTAP4-2Q9BYR5 136 aa5.42□□□□□ -1.54
CCDC142-209ENST00000497232 RBM12B-AS1Q9P1G2 102 aa5.42□□□□□ -1.54
CCDC142-209ENST00000497232 KRTAP4-11Q9BYQ6 195 aa5.41□□□□□ -1.54
CCDC142-209ENST00000497232 C20orf197Q8N268 126 aa5.38□□□□□ -1.55
CCDC142-209ENST00000497232 SNURFQ9Y675 71 aa5.38□□□□□ -1.55
CCDC142-209ENST00000497232 CYSTM1Q9H1C7 97 aa5.37□□□□□ -1.55
CCDC142-209ENST00000497232 H1FX-AS1Q4G0G2 97 aa5.36□□□□□ -1.55
CCDC142-209ENST00000497232 ANAPC13Q9BS18 74 aa5.36□□□□□ -1.55
CCDC142-209ENST00000497232 FAM236DA0A1B0GTK5 79 aa5.34□□□□□ -1.55
CCDC142-209ENST00000497232 FAM236CP0DP71 79 aa5.34□□□□□ -1.55
CCDC142-209ENST00000497232 CCDC179H3BU77 68 aa5.31□□□□□ -1.56
CCDC142-209ENST00000497232 H7BZZ5 65 aa5.3□□□□□ -1.56
CCDC142-209ENST00000497232 DMAC1Q96GE9 116 aa5.3□□□□□ -1.56
CCDC142-209ENST00000497232 A8MUN3 132 aa5.29□□□□□ -1.56
CCDC142-209ENST00000497232 SPANXA2-OT1Q8N9U9 137 aa5.29□□□□□ -1.56
CCDC142-209ENST00000497232 KRTAP10-6P60371 365 aaPredicted RBP5.27□□□□□ -1.57
CCDC142-209ENST00000497232 NDUFC1O43677 76 aa5.25□□□□□ -1.57
CCDC142-209ENST00000497232 LCA10Q71F78 164 aa5.25□□□□□ -1.57
CCDC142-209ENST00000497232 KRTAP9-8Q9BYQ0 159 aa5.24□□□□□ -1.57
CCDC142-209ENST00000497232 S4R3F8 94 aa5.22□□□□□ -1.57
CCDC142-209ENST00000497232 M0R2T5 61 aa5.2□□□□□ -1.58
CCDC142-209ENST00000497232 MT2AP02795 61 aa5.17□□□□□ -1.58
CCDC142-209ENST00000497232 ACYP2P14621 99 aa5.17□□□□□ -1.58
CCDC142-209ENST00000497232 CSAG1Q6PB30 78 aa5.14□□□□□ -1.59
CCDC142-209ENST00000497232 MT1FP04733 61 aa5.13□□□□□ -1.59
CCDC142-209ENST00000497232 PCP4P48539 62 aa5.12□□□□□ -1.59
CCDC142-209ENST00000497232 TMEM258P61165 79 aa5.09□□□□□ -1.59
CCDC142-209ENST00000497232 COA5Q86WW8 74 aa5.09□□□□□ -1.59
CCDC142-209ENST00000497232 H0YAA0 97 aa5.08□□□□□ -1.6
CCDC142-209ENST00000497232 ATP5EP56381 51 aaPredicted RBP5.07□□□□□ -1.6
CCDC142-209ENST00000497232 KRTAP23-1A1A580 65 aa5.06□□□□□ -1.6
CCDC142-209ENST00000497232 CHKB-CPT1BH3BT56 60 aa5.02□□□□□ -1.61
CCDC142-209ENST00000497232 KRTAP10-10P60014 251 aa5.02□□□□□ -1.61
CCDC142-209ENST00000497232 SPTSSBQ8NFR3 76 aa4.98□□□□□ -1.61
CCDC142-209ENST00000497232 P0C880 135 aa4.97□□□□□ -1.61
CCDC142-209ENST00000497232 ADM2Q7Z4H4 148 aa4.97□□□□□ -1.61
CCDC142-209ENST00000497232 USH2AO75445 5202 aa4.94□□□□□ -1.62
CCDC142-209ENST00000497232 SPRR2GQ9BYE4 73 aa4.94□□□□□ -1.62
CCDC142-209ENST00000497232 SERP1Q9Y6X1 66 aa4.94□□□□□ -1.62
CCDC142-209ENST00000497232 CRIPTQ9P021 101 aa4.9□□□□□ -1.63
CCDC142-209ENST00000497232 KRTAP19-8Q3LI54 63 aa4.87□□□□□ -1.63
CCDC142-209ENST00000497232 KRTAP15-1Q3LI76 137 aa4.86□□□□□ -1.63
CCDC142-209ENST00000497232 FSIP2Q5CZC0 6907 aa4.85□□□□□ -1.63
CCDC142-209ENST00000497232 RPS28P62857 69 aaKnown RBP4.85□□□□□ -1.63
CCDC142-209ENST00000497232 LINC01558Q9Y6Z2 57 aa4.85□□□□□ -1.63
CCDC142-209ENST00000497232 SSPOA2VEC9 5147 aa4.85□□□□□ -1.63
CCDC142-209ENST00000497232 MT1BP07438 61 aa4.83□□□□□ -1.64
CCDC142-209ENST00000497232 KRTAP13-4Q3LI77 160 aa4.82□□□□□ -1.64
CCDC142-209ENST00000497232 R4GN34 69 aa4.78□□□□□ -1.64
CCDC142-209ENST00000497232 A0A1B0GU69 56 aa4.77□□□□□ -1.65
CCDC142-209ENST00000497232 M0QZ58 72 aa4.77□□□□□ -1.65
CCDC142-209ENST00000497232 Q1T7F1 81 aa4.77□□□□□ -1.65
CCDC142-209ENST00000497232 SMIM26A0A096LP01 95 aa4.76□□□□□ -1.65
CCDC142-209ENST00000497232 SEC61GP60059 68 aa4.76□□□□□ -1.65
CCDC142-209ENST00000497232 A0A1B0GU33 70 aa4.74□□□□□ -1.65
CCDC142-209ENST00000497232 Q5VV11 94 aa4.74□□□□□ -1.65
CCDC142-209ENST00000497232 KRTAP19-6Q3LI70 58 aa4.7□□□□□ -1.66
CCDC142-209ENST00000497232 SPATA8Q6RVD6 105 aa4.7□□□□□ -1.66
CCDC142-209ENST00000497232 CRCT1Q9UGL9 99 aa4.7□□□□□ -1.66
CCDC142-209ENST00000497232 V9GYY9 64 aa4.69□□□□□ -1.66
CCDC142-209ENST00000497232 A6NN06 94 aa4.68□□□□□ -1.66
CCDC142-209ENST00000497232 KRTAP5-3Q6L8H2 238 aa4.68□□□□□ -1.66
CCDC142-209ENST00000497232 PRR15LQ9BU68 103 aa4.68□□□□□ -1.66
CCDC142-209ENST00000497232 FCGBPQ9Y6R7 5405 aaPredicted RBP4.66□□□□□ -1.66
CCDC142-209ENST00000497232 LINC01554Q52M75 96 aa4.65□□□□□ -1.67
CCDC142-209ENST00000497232 PSPHP1O15172 72 aa4.64□□□□□ -1.67
CCDC142-209ENST00000497232 KRTAP10-5P60370 271 aa4.61□□□□□ -1.67
CCDC142-209ENST00000497232 A8MU10 97 aa4.6□□□□□ -1.67
CCDC142-209ENST00000497232 KRTAP12-1P59990 96 aa4.6□□□□□ -1.67
CCDC142-209ENST00000497232 MT1XP80297 61 aa4.6□□□□□ -1.67
CCDC142-209ENST00000497232 UQCR11O14957 56 aa4.59□□□□□ -1.67
CCDC142-209ENST00000497232 A0A0D9SG42 100 aa4.58□□□□□ -1.68
CCDC142-209ENST00000497232 PLAC4Q8WY50 150 aa4.58□□□□□ -1.68
CCDC142-209ENST00000497232 KRTAP12-2P59991 146 aa4.56□□□□□ -1.68
CCDC142-209ENST00000497232 MIR22HGQ0VDD5 57 aa4.53□□□□□ -1.68
CCDC142-209ENST00000497232 SPINT4Q6UDR6 99 aa4.48□□□□□ -1.69
CCDC142-209ENST00000497232 A6NED7 52 aa4.46□□□□□ -1.7
CCDC142-209ENST00000497232 PRO2289Q9P1D8 64 aa4.45□□□□□ -1.7
CCDC142-209ENST00000497232 MACF1Q9UPN3 7388 aaKnown RBP4.45□□□□□ -1.7
CCDC142-209ENST00000497232 CAMK2N1Q7Z7J9 78 aa4.41□□□□□ -1.7
CCDC142-209ENST00000497232 CDC42SE1Q9NRR8 79 aa4.41□□□□□ -1.7
CCDC142-209ENST00000497232 KRTAP10-7P60409 375 aaPredicted RBP4.39□□□□□ -1.71
CCDC142-209ENST00000497232 A0A0A0MQY5 61 aa4.38□□□□□ -1.71
CCDC142-209ENST00000497232 KRTAP10-12P60413 245 aa4.38□□□□□ -1.71
CCDC142-209ENST00000497232 C10orf95Q9H7T3 257 aa4.38□□□□□ -1.71
CCDC142-209ENST00000497232 SYNE2Q8WXH0 6885 aaKnown RBP4.37□□□□□ -1.71
CCDC142-209ENST00000497232 KMT2DO14686 5537 aa4.32□□□□□ -1.72
CCDC142-209ENST00000497232 K7ERS5 55 aa4.27□□□□□ -1.73
CCDC142-209ENST00000497232 LCE1AQ5T7P2 110 aa4.25□□□□□ -1.73
CCDC142-209ENST00000497232 KRTAP6-3Q3LI67 103 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms