RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 SPTSSBQ8NFR3 76 aa8.52□□□□□ -1.05
CBX4-204ENST00000495122 COX6B2Q6YFQ2 88 aa8.49□□□□□ -1.05
CBX4-204ENST00000495122 PRR15LQ9BU68 103 aa8.49□□□□□ -1.05
CBX4-204ENST00000495122 PSPHP1O15172 72 aa8.48□□□□□ -1.05
CBX4-204ENST00000495122 Q5VV11 94 aa8.47□□□□□ -1.05
CBX4-204ENST00000495122 KRTAP9-6A0A140TA67 174 aa8.44□□□□□ -1.06
CBX4-204ENST00000495122 KRTAP4-1Q9BYQ7 146 aa8.44□□□□□ -1.06
CBX4-204ENST00000495122 SEC61BP60468 96 aaKnown RBP8.43□□□□□ -1.06
CBX4-204ENST00000495122 KRTAP3-1Q9BYR8 98 aa8.4□□□□□ -1.06
CBX4-204ENST00000495122 PRO0628Q9UI54 55 aa8.38□□□□□ -1.07
CBX4-204ENST00000495122 A0A1B0GU69 56 aa8.35□□□□□ -1.07
CBX4-204ENST00000495122 BRK1Q8WUW1 75 aa8.35□□□□□ -1.07
CBX4-204ENST00000495122 A6NED7 52 aa8.29□□□□□ -1.08
CBX4-204ENST00000495122 SEC61GP60059 68 aa8.29□□□□□ -1.08
CBX4-204ENST00000495122 SVIPQ8NHG7 77 aa8.26□□□□□ -1.09
CBX4-204ENST00000495122 RBM12B-AS1Q9P1G2 102 aa8.25□□□□□ -1.09
CBX4-204ENST00000495122 LCE2CQ5TA81 110 aa8.24□□□□□ -1.09
CBX4-204ENST00000495122 CDC42SE1Q9NRR8 79 aa8.24□□□□□ -1.09
CBX4-204ENST00000495122 KRTAP19-2Q3LHN2 52 aa8.23□□□□□ -1.09
CBX4-204ENST00000495122 FSIP2Q5CZC0 6907 aa8.22□□□□□ -1.09
CBX4-204ENST00000495122 H1FX-AS1Q4G0G2 97 aa8.22□□□□□ -1.09
CBX4-204ENST00000495122 S4R3F8 94 aa8.2□□□□□ -1.1
CBX4-204ENST00000495122 LCE2DQ5TA82 110 aaPredicted RBP8.19□□□□□ -1.1
CBX4-204ENST00000495122 UQCR11O14957 56 aa8.18□□□□□ -1.1
CBX4-204ENST00000495122 MT1HP80294 61 aa8.15□□□□□ -1.1
CBX4-204ENST00000495122 LCA10Q71F78 164 aa8.14□□□□□ -1.11
CBX4-204ENST00000495122 SPATA8Q6RVD6 105 aa8.11□□□□□ -1.11
CBX4-204ENST00000495122 KRTAP3-3Q9BYR6 98 aa8.11□□□□□ -1.11
CBX4-204ENST00000495122 CRCT1Q9UGL9 99 aa8.1□□□□□ -1.11
CBX4-204ENST00000495122 FLGP20930 4061 aaPredicted RBP8.09□□□□□ -1.11
CBX4-204ENST00000495122 MIR22HGQ0VDD5 57 aa8.07□□□□□ -1.12
CBX4-204ENST00000495122 A0A1B0GU33 70 aa8.02□□□□□ -1.13
CBX4-204ENST00000495122 LORP23490 312 aaPredicted RBP8.01□□□□□ -1.13
CBX4-204ENST00000495122 CSAG1Q6PB30 78 aa8.01□□□□□ -1.13
CBX4-204ENST00000495122 KRTAP10-6P60371 365 aaPredicted RBP8□□□□□ -1.13
CBX4-204ENST00000495122 A8MU10 97 aa7.98□□□□□ -1.13
CBX4-204ENST00000495122 H0YAA0 97 aa7.94□□□□□ -1.14
CBX4-204ENST00000495122 PMAIP1Q13794 54 aa7.93□□□□□ -1.14
CBX4-204ENST00000495122 M0R2T5 61 aa7.92□□□□□ -1.14
CBX4-204ENST00000495122 KRTAP3-2Q9BYR7 98 aa7.89□□□□□ -1.15
CBX4-204ENST00000495122 A6NN06 94 aa7.87□□□□□ -1.15
CBX4-204ENST00000495122 ADM2Q7Z4H4 148 aa7.81□□□□□ -1.16
CBX4-204ENST00000495122 K7ERS5 55 aa7.76□□□□□ -1.17
CBX4-204ENST00000495122 M0QZ58 72 aa7.75□□□□□ -1.17
CBX4-204ENST00000495122 P0C880 135 aa7.75□□□□□ -1.17
CBX4-204ENST00000495122 KTN1-AS1Q86SY8 53 aa7.73□□□□□ -1.17
CBX4-204ENST00000495122 KRTAP9-8Q9BYQ0 159 aa7.68□□□□□ -1.18
CBX4-204ENST00000495122 KRTAP13-4Q3LI77 160 aa7.66□□□□□ -1.18
CBX4-204ENST00000495122 SSPOA2VEC9 5147 aa7.59□□□□□ -1.19
CBX4-204ENST00000495122 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.58□□□□□ -1.2
CBX4-204ENST00000495122 USH2AO75445 5202 aa7.57□□□□□ -1.2
CBX4-204ENST00000495122 MT2AP02795 61 aa7.57□□□□□ -1.2
CBX4-204ENST00000495122 KRTAP9-7A8MTY7 169 aa7.56□□□□□ -1.2
CBX4-204ENST00000495122 R4GN34 69 aa7.56□□□□□ -1.2
CBX4-204ENST00000495122 CRIPTQ9P021 101 aa7.54□□□□□ -1.2
CBX4-204ENST00000495122 A0A0D9SG42 100 aa7.53□□□□□ -1.2
CBX4-204ENST00000495122 MT1FP04733 61 aa7.51□□□□□ -1.21
CBX4-204ENST00000495122 KRTAP12-1P59990 96 aa7.46□□□□□ -1.22
CBX4-204ENST00000495122 LCE2BO14633 110 aa7.45□□□□□ -1.22
CBX4-204ENST00000495122 KRTAP9-3Q9BYQ3 159 aa7.44□□□□□ -1.22
CBX4-204ENST00000495122 KRTAP10-10P60014 251 aa7.42□□□□□ -1.22
CBX4-204ENST00000495122 FCGBPQ9Y6R7 5405 aaPredicted RBP7.42□□□□□ -1.22
CBX4-204ENST00000495122 ROMO1P60602 79 aa7.41□□□□□ -1.22
CBX4-204ENST00000495122 KRTAP12-2P59991 146 aa7.4□□□□□ -1.22
CBX4-204ENST00000495122 SPINT4Q6UDR6 99 aa7.38□□□□□ -1.23
CBX4-204ENST00000495122 KRTAP19-1Q8IUB9 90 aa7.37□□□□□ -1.23
CBX4-204ENST00000495122 LINC01554Q52M75 96 aa7.32□□□□□ -1.24
CBX4-204ENST00000495122 MACF1Q9UPN3 7388 aaKnown RBP7.3□□□□□ -1.24
CBX4-204ENST00000495122 PRAC1Q96KF2 57 aa7.29□□□□□ -1.24
CBX4-204ENST00000495122 SYNE2Q8WXH0 6885 aaKnown RBP7.28□□□□□ -1.24
CBX4-204ENST00000495122 KRTAP19-6Q3LI70 58 aa7.21□□□□□ -1.26
CBX4-204ENST00000495122 SPRR2GQ9BYE4 73 aa7.21□□□□□ -1.26
CBX4-204ENST00000495122 KRTAP25-1Q3LHN0 102 aa7.2□□□□□ -1.26
CBX4-204ENST00000495122 CAMK2N1Q7Z7J9 78 aa7.1□□□□□ -1.27
CBX4-204ENST00000495122 PLAC4Q8WY50 150 aa7.04□□□□□ -1.28
CBX4-204ENST00000495122 C10orf95Q9H7T3 257 aa7.01□□□□□ -1.29
CBX4-204ENST00000495122 KRTAP19-8Q3LI54 63 aa6.99□□□□□ -1.29
CBX4-204ENST00000495122 KRTAP6-3Q3LI67 103 aa6.96□□□□□ -1.3
CBX4-204ENST00000495122 PP632Q6XCG6 107 aa6.88□□□□□ -1.31
CBX4-204ENST00000495122 MT1BP07438 61 aa6.87□□□□□ -1.31
CBX4-204ENST00000495122 KRTAP23-1A1A580 65 aa6.85□□□□□ -1.31
CBX4-204ENST00000495122 TNP1P09430 55 aa6.85□□□□□ -1.31
CBX4-204ENST00000495122 NEBP20929 6669 aa6.84□□□□□ -1.32
CBX4-204ENST00000495122 MUC12Q9UKN1 5478 aa6.73□□□□□ -1.33
CBX4-204ENST00000495122 KRTAP10-5P60370 271 aa6.73□□□□□ -1.33
CBX4-204ENST00000495122 PRO2289Q9P1D8 64 aa6.67□□□□□ -1.34
CBX4-204ENST00000495122 MT1XP80297 61 aa6.63□□□□□ -1.35
CBX4-204ENST00000495122 KRTAP5-9P26371 169 aa6.58□□□□□ -1.36
CBX4-204ENST00000495122 KRTAP20-1Q3LI63 56 aa6.57□□□□□ -1.36
CBX4-204ENST00000495122 KMT2DO14686 5537 aa6.51□□□□□ -1.37
CBX4-204ENST00000495122 MDN1Q9NU22 5596 aa6.48□□□□□ -1.37
CBX4-204ENST00000495122 KRTAP10-12P60413 245 aa6.42□□□□□ -1.38
CBX4-204ENST00000495122 KRTAP15-1Q3LI76 137 aa6.41□□□□□ -1.38
CBX4-204ENST00000495122 LCE3AQ5TA76 89 aa6.41□□□□□ -1.38
CBX4-204ENST00000495122 KRTAP8-1Q8IUC2 63 aa6.4□□□□□ -1.38
CBX4-204ENST00000495122 KRTAP2-3P0C7H8 128 aa6.32□□□□□ -1.4
CBX4-204ENST00000495122 KRTAP10-7P60409 375 aaPredicted RBP6.32□□□□□ -1.4
CBX4-204ENST00000495122 SPRR2FQ96RM1 72 aa6.32□□□□□ -1.4
CBX4-204ENST00000495122 KRTAP2-4Q9BYR9 128 aa6.32□□□□□ -1.4
CBX4-204ENST00000495122 SPRR2EP22531 72 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 233.2 ms