RNA–Protein interactions for RNA: ENST00000494945.1

PKP4-215, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-215ENST00000494945 S4R3F8 94 aa5.47□□□□□ -1.53
PKP4-215ENST00000494945 UBR4Q5T4S7 5183 aa5.47□□□□□ -1.53
PKP4-215ENST00000494945 RNF213Q63HN8 5207 aa5.46□□□□□ -1.54
PKP4-215ENST00000494945 MUC2Q02817 5179 aa5.45□□□□□ -1.54
PKP4-215ENST00000494945 SPTSSBQ8NFR3 76 aa5.44□□□□□ -1.54
PKP4-215ENST00000494945 LCA10Q71F78 164 aa5.43□□□□□ -1.54
PKP4-215ENST00000494945 LCE2CQ5TA81 110 aa5.41□□□□□ -1.54
PKP4-215ENST00000494945 FLGP20930 4061 aaPredicted RBP5.39□□□□□ -1.55
PKP4-215ENST00000494945 SMIM26A0A096LP01 95 aa5.38□□□□□ -1.55
PKP4-215ENST00000494945 CSAG1Q6PB30 78 aa5.36□□□□□ -1.55
PKP4-215ENST00000494945 LOC100996750A0A140TA64 210 aa5.31□□□□□ -1.56
PKP4-215ENST00000494945 MT1HP80294 61 aa5.31□□□□□ -1.56
PKP4-215ENST00000494945 KRTAP4-6Q9BYQ5 205 aa5.31□□□□□ -1.56
PKP4-215ENST00000494945 V9GYY9 64 aa5.31□□□□□ -1.56
PKP4-215ENST00000494945 Q1T7F1 81 aa5.3□□□□□ -1.56
PKP4-215ENST00000494945 LINC01558Q9Y6Z2 57 aa5.29□□□□□ -1.56
PKP4-215ENST00000494945 FAT4Q6V0I7 4981 aa5.26□□□□□ -1.57
PKP4-215ENST00000494945 H0YAA0 97 aa5.25□□□□□ -1.57
PKP4-215ENST00000494945 M0R2T5 61 aa5.25□□□□□ -1.57
PKP4-215ENST00000494945 SEC61GP60059 68 aa5.25□□□□□ -1.57
PKP4-215ENST00000494945 A0A1B0GU69 56 aa5.24□□□□□ -1.57
PKP4-215ENST00000494945 PRR15LQ9BU68 103 aa5.24□□□□□ -1.57
PKP4-215ENST00000494945 SVIPQ8NHG7 77 aa5.22□□□□□ -1.57
PKP4-215ENST00000494945 ADM2Q7Z4H4 148 aa5.19□□□□□ -1.58
PKP4-215ENST00000494945 PSPHP1O15172 72 aa5.17□□□□□ -1.58
PKP4-215ENST00000494945 LCE2AQ5TA79 106 aaPredicted RBP5.17□□□□□ -1.58
PKP4-215ENST00000494945 KRTAP10-6P60371 365 aaPredicted RBP5.16□□□□□ -1.58
PKP4-215ENST00000494945 P0C880 135 aa5.14□□□□□ -1.59
PKP4-215ENST00000494945 Q5VV11 94 aa5.14□□□□□ -1.59
PKP4-215ENST00000494945 A0A1B0GU33 70 aa5.11□□□□□ -1.59
PKP4-215ENST00000494945 LORP23490 312 aaPredicted RBP5.11□□□□□ -1.59
PKP4-215ENST00000494945 KRTAP9-8Q9BYQ0 159 aa5.1□□□□□ -1.59
PKP4-215ENST00000494945 MT2AP02795 61 aa5.08□□□□□ -1.6
PKP4-215ENST00000494945 UQCR11O14957 56 aa5.07□□□□□ -1.6
PKP4-215ENST00000494945 CRIPTQ9P021 101 aa5.07□□□□□ -1.6
PKP4-215ENST00000494945 M0QZ58 72 aa5.05□□□□□ -1.6
PKP4-215ENST00000494945 A6NED7 52 aa5.04□□□□□ -1.6
PKP4-215ENST00000494945 MT1FP04733 61 aa5.04□□□□□ -1.6
PKP4-215ENST00000494945 KRTAP10-10P60014 251 aa5.04□□□□□ -1.6
PKP4-215ENST00000494945 R4GN34 69 aa5.03□□□□□ -1.6
PKP4-215ENST00000494945 KRTAP9-2Q9BYQ4 174 aa5.01□□□□□ -1.61
PKP4-215ENST00000494945 KRTAP13-4Q3LI77 160 aa5□□□□□ -1.61
PKP4-215ENST00000494945 MIR22HGQ0VDD5 57 aa4.99□□□□□ -1.61
PKP4-215ENST00000494945 SPATA8Q6RVD6 105 aa4.99□□□□□ -1.61
PKP4-215ENST00000494945 SPRR2GQ9BYE4 73 aa4.96□□□□□ -1.62
PKP4-215ENST00000494945 KRTAP9-6A0A140TA67 174 aa4.95□□□□□ -1.62
PKP4-215ENST00000494945 CDC42SE1Q9NRR8 79 aa4.95□□□□□ -1.62
PKP4-215ENST00000494945 KRTAP19-1Q8IUB9 90 aa4.92□□□□□ -1.62
PKP4-215ENST00000494945 KRTAP9-3Q9BYQ3 159 aa4.92□□□□□ -1.62
PKP4-215ENST00000494945 A8MU10 97 aa4.9□□□□□ -1.63
PKP4-215ENST00000494945 LCE2BO14633 110 aa4.9□□□□□ -1.63
PKP4-215ENST00000494945 LINC01554Q52M75 96 aa4.9□□□□□ -1.63
PKP4-215ENST00000494945 BRK1Q8WUW1 75 aa4.9□□□□□ -1.63
PKP4-215ENST00000494945 A0A0D9SG42 100 aa4.89□□□□□ -1.63
PKP4-215ENST00000494945 A6NN06 94 aa4.87□□□□□ -1.63
PKP4-215ENST00000494945 KRTAP19-8Q3LI54 63 aa4.84□□□□□ -1.63
PKP4-215ENST00000494945 KRTAP12-1P59990 96 aa4.82□□□□□ -1.64
PKP4-215ENST00000494945 K7ERS5 55 aa4.81□□□□□ -1.64
PKP4-215ENST00000494945 SPINT4Q6UDR6 99 aa4.8□□□□□ -1.64
PKP4-215ENST00000494945 KRTAP12-2P59991 146 aa4.79□□□□□ -1.64
PKP4-215ENST00000494945 H3BS24 57 aa4.78□□□□□ -1.64
PKP4-215ENST00000494945 PLAC4Q8WY50 150 aa4.77□□□□□ -1.65
PKP4-215ENST00000494945 PRO0628Q9UI54 55 aa4.77□□□□□ -1.65
PKP4-215ENST00000494945 MT1BP07438 61 aa4.76□□□□□ -1.65
PKP4-215ENST00000494945 CAMK2N1Q7Z7J9 78 aa4.7□□□□□ -1.66
PKP4-215ENST00000494945 FSIP2Q5CZC0 6907 aa4.68□□□□□ -1.66
PKP4-215ENST00000494945 CRCT1Q9UGL9 99 aa4.67□□□□□ -1.66
PKP4-215ENST00000494945 KRTAP4-8Q9BYQ9 185 aa4.66□□□□□ -1.66
PKP4-215ENST00000494945 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.63□□□□□ -1.67
PKP4-215ENST00000494945 PMAIP1Q13794 54 aa4.63□□□□□ -1.67
PKP4-215ENST00000494945 USH2AO75445 5202 aa4.62□□□□□ -1.67
PKP4-215ENST00000494945 PRO2289Q9P1D8 64 aa4.59□□□□□ -1.67
PKP4-215ENST00000494945 ROMO1P60602 79 aa4.58□□□□□ -1.68
PKP4-215ENST00000494945 MT1XP80297 61 aa4.58□□□□□ -1.68
PKP4-215ENST00000494945 KRTAP10-5P60370 271 aa4.57□□□□□ -1.68
PKP4-215ENST00000494945 C10orf95Q9H7T3 257 aa4.57□□□□□ -1.68
PKP4-215ENST00000494945 KRTAP19-6Q3LI70 58 aa4.55□□□□□ -1.68
PKP4-215ENST00000494945 SSPOA2VEC9 5147 aa4.51□□□□□ -1.69
PKP4-215ENST00000494945 TNP1P09430 55 aa4.47□□□□□ -1.69
PKP4-215ENST00000494945 KRTAP25-1Q3LHN0 102 aa4.47□□□□□ -1.69
PKP4-215ENST00000494945 KTN1-AS1Q86SY8 53 aa4.43□□□□□ -1.7
PKP4-215ENST00000494945 KRTAP9-7A8MTY7 169 aa4.42□□□□□ -1.7
PKP4-215ENST00000494945 KRTAP4-8A0A0G2JLE6 195 aa4.39□□□□□ -1.71
PKP4-215ENST00000494945 KRTAP10-7P60409 375 aaPredicted RBP4.37□□□□□ -1.71
PKP4-215ENST00000494945 KRTAP10-12P60413 245 aa4.37□□□□□ -1.71
PKP4-215ENST00000494945 KRTAP9-9Q9BYP9 154 aa4.37□□□□□ -1.71
PKP4-215ENST00000494945 KRTAP9-4Q9BYQ2 154 aa4.37□□□□□ -1.71
PKP4-215ENST00000494945 LCE3BQ5TA77 95 aa4.36□□□□□ -1.71
PKP4-215ENST00000494945 KRTAP23-1A1A580 65 aa4.34□□□□□ -1.71
PKP4-215ENST00000494945 PRAC1Q96KF2 57 aa4.32□□□□□ -1.72
PKP4-215ENST00000494945 FCGBPQ9Y6R7 5405 aaPredicted RBP4.31□□□□□ -1.72
PKP4-215ENST00000494945 PP632Q6XCG6 107 aa4.3□□□□□ -1.72
PKP4-215ENST00000494945 KRTAP4-7Q9BYR0 210 aa4.27□□□□□ -1.73
PKP4-215ENST00000494945 LCE3AQ5TA76 89 aa4.26□□□□□ -1.73
PKP4-215ENST00000494945 KRTAP4-12Q9BQ66 201 aa4.24□□□□□ -1.73
PKP4-215ENST00000494945 KRTAP8-1Q8IUC2 63 aa4.21□□□□□ -1.74
PKP4-215ENST00000494945 MACF1Q9UPN3 7388 aaKnown RBP4.15□□□□□ -1.75
PKP4-215ENST00000494945 KMT2DO14686 5537 aa4.14□□□□□ -1.75
PKP4-215ENST00000494945 KRTAP4-2Q9BYR5 136 aa4.12□□□□□ -1.75
PKP4-215ENST00000494945 SYNE2Q8WXH0 6885 aaKnown RBP4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms